RNA–Protein interactions for RNA: ENST00000562542.1

KATNB1-202, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-202ENST00000562542 PLOD3O60568 738 aa16.31■□□□□ 0.2
KATNB1-202ENST00000562542 LYZL6O75951 148 aa16.31■□□□□ 0.2
KATNB1-202ENST00000562542 CTAGE8P0CG41 777 aa16.31■□□□□ 0.2
KATNB1-202ENST00000562542 CARD18P57730 90 aa16.31■□□□□ 0.2
KATNB1-202ENST00000562542 TRA2BP62995 288 aaKnown RBP16.31■□□□□ 0.2
KATNB1-202ENST00000562542 RAC1P63000 192 aa16.31■□□□□ 0.2
KATNB1-202ENST00000562542 ACAP2Q15057 778 aa16.31■□□□□ 0.2
KATNB1-202ENST00000562542 RNPS1Q15287 305 aaKnown RBP16.31■□□□□ 0.2
KATNB1-202ENST00000562542 C11orf71Q6IPW1 123 aa16.31■□□□□ 0.2
KATNB1-202ENST00000562542 CTAGE4Q8IX94 777 aa16.31■□□□□ 0.2
KATNB1-202ENST00000562542 FAM9CQ8IZT9 166 aa16.31■□□□□ 0.2
KATNB1-202ENST00000562542 MUC15Q8N387 334 aa16.31■□□□□ 0.2
KATNB1-202ENST00000562542 GTPBP8Q8N3Z3 284 aaPredicted RBP16.31■□□□□ 0.2
KATNB1-202ENST00000562542 RFLNBQ8N5W9 214 aa16.31■□□□□ 0.2
KATNB1-202ENST00000562542 C1orf52Q8N6N3 182 aaKnown RBP16.31■□□□□ 0.2
KATNB1-202ENST00000562542 MSI2Q96DH6 328 aaKnown RBP16.31■□□□□ 0.2
KATNB1-202ENST00000562542 C1orf159Q96HA4 380 aa16.31■□□□□ 0.2
KATNB1-202ENST00000562542 RADILQ96JH8 1075 aa16.31■□□□□ 0.2
KATNB1-202ENST00000562542 RNF145Q96MT1 663 aa16.31■□□□□ 0.2
KATNB1-202ENST00000562542 ADAM19Q9H013 955 aa16.31■□□□□ 0.2
KATNB1-202ENST00000562542 Q9N2J8 555 aa16.31■□□□□ 0.2
KATNB1-202ENST00000562542 FARSBQ9NSD9 589 aaKnown RBP16.31■□□□□ 0.2
KATNB1-202ENST00000562542 KLHL13Q9P2N7 655 aa16.31■□□□□ 0.2
KATNB1-202ENST00000562542 A0A087WZY1 265 aa16.3■□□□□ 0.2
KATNB1-202ENST00000562542 IGLV3-32A0A0A0MS00 114 aa16.3■□□□□ 0.2
KATNB1-202ENST00000562542 FAM159BA6NKW6 160 aa16.3■□□□□ 0.2
KATNB1-202ENST00000562542 UTS2O95399 124 aa16.3■□□□□ 0.2
KATNB1-202ENST00000562542 ITGA2P17301 1181 aa16.3■□□□□ 0.2
KATNB1-202ENST00000562542 FABP6P51161 128 aa16.3■□□□□ 0.2
KATNB1-202ENST00000562542 ZNF41P51814 821 aaPredicted RBP16.3■□□□□ 0.2
KATNB1-202ENST00000562542 PSMD4P55036 377 aaKnown RBP16.3■□□□□ 0.2
KATNB1-202ENST00000562542 CSTF3Q12996 717 aaKnown RBP16.3■□□□□ 0.2
KATNB1-202ENST00000562542 KLC3Q6P597 504 aa16.3■□□□□ 0.2
KATNB1-202ENST00000562542 SLC22A25Q6T423 547 aa16.3■□□□□ 0.2
KATNB1-202ENST00000562542 CENPLQ8N0S6 344 aaPredicted RBP16.3■□□□□ 0.2
KATNB1-202ENST00000562542 PPM1NQ8N819 430 aa16.3■□□□□ 0.2
KATNB1-202ENST00000562542 CDYL2Q8N8U2 506 aa16.3■□□□□ 0.2
KATNB1-202ENST00000562542 RNF128Q8TEB7 428 aa16.3■□□□□ 0.2
KATNB1-202ENST00000562542 SELENOMQ8WWX9 145 aa16.3■□□□□ 0.2
KATNB1-202ENST00000562542 DHRS9Q9BPW9 319 aa16.3■□□□□ 0.2
KATNB1-202ENST00000562542 L2HGDHQ9H9P8 463 aa16.3■□□□□ 0.2
KATNB1-202ENST00000562542 TIGARQ9NQ88 270 aa16.3■□□□□ 0.2
KATNB1-202ENST00000562542 NMRK1Q9NWW6 199 aa16.3■□□□□ 0.2
KATNB1-202ENST00000562542 PPP2R2CQ9Y2T4 447 aa16.3■□□□□ 0.2
KATNB1-202ENST00000562542 MALRD1Q5VYJ5 2156 aa16.3■□□□□ 0.2
KATNB1-202ENST00000562542 PCNX3Q9H6A9 2034 aa16.29■□□□□ 0.2
KATNB1-202ENST00000562542 ESYT3A0FGR9 886 aa16.29■□□□□ 0.2
KATNB1-202ENST00000562542 E7EQL1 145 aa16.29■□□□□ 0.2
KATNB1-202ENST00000562542 IL33O95760 270 aa16.29■□□□□ 0.2
KATNB1-202ENST00000562542 PDYNP01213 254 aa16.29■□□□□ 0.2
KATNB1-202ENST00000562542 IL3P08700 152 aa16.29■□□□□ 0.2
KATNB1-202ENST00000562542 COL6A2P12110 1019 aa16.29■□□□□ 0.2
KATNB1-202ENST00000562542 APEHP13798 732 aaKnown RBP16.29■□□□□ 0.2
KATNB1-202ENST00000562542 MPIP34949 423 aa16.29■□□□□ 0.2
KATNB1-202ENST00000562542 SFTPDP35247 375 aa16.29■□□□□ 0.2
KATNB1-202ENST00000562542 ZNHIT3Q15649 155 aaPredicted RBP16.29■□□□□ 0.2
KATNB1-202ENST00000562542 ZNF239Q16600 458 aaKnown RBP16.29■□□□□ 0.2
KATNB1-202ENST00000562542 METTL2BQ6P1Q9 378 aaKnown RBP16.29■□□□□ 0.2
KATNB1-202ENST00000562542 TDRPQ86YL5 185 aa16.29■□□□□ 0.2
KATNB1-202ENST00000562542 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.29■□□□□ 0.2
KATNB1-202ENST00000562542 PTGR2Q8N8N7 351 aaPredicted RBP16.29■□□□□ 0.2
KATNB1-202ENST00000562542 ZBTB8AQ96BR9 441 aa16.29■□□□□ 0.2
KATNB1-202ENST00000562542 KLHL15Q96M94 604 aa16.29■□□□□ 0.2
KATNB1-202ENST00000562542 BBS4Q96RK4 519 aa16.29■□□□□ 0.2
KATNB1-202ENST00000562542 NPAS1Q99742 590 aa16.29■□□□□ 0.2
KATNB1-202ENST00000562542 CCDC189A1A4V9 331 aa16.28■□□□□ 0.2
KATNB1-202ENST00000562542 H7C417 338 aa16.28■□□□□ 0.2
KATNB1-202ENST00000562542 TP73O15350 636 aa16.28■□□□□ 0.2
KATNB1-202ENST00000562542 LY6HO94772 140 aa16.28■□□□□ 0.2
KATNB1-202ENST00000562542 TGFAP01135 160 aa16.28■□□□□ 0.2
KATNB1-202ENST00000562542 BMP4P12644 408 aa16.28■□□□□ 0.2
KATNB1-202ENST00000562542 EFNA4P52798 201 aa16.28■□□□□ 0.2
KATNB1-202ENST00000562542 PRR5P85299 388 aa16.28■□□□□ 0.2
KATNB1-202ENST00000562542 TRAF3Q13114 568 aa16.28■□□□□ 0.2
KATNB1-202ENST00000562542 CPTPQ5TA50 214 aa16.28■□□□□ 0.2
KATNB1-202ENST00000562542 TMEM108Q6UXF1 575 aa16.28■□□□□ 0.2
KATNB1-202ENST00000562542 Q6ZSR9 355 aa16.28■□□□□ 0.2
KATNB1-202ENST00000562542 C3orf62Q6ZUJ4 267 aa16.28■□□□□ 0.2
KATNB1-202ENST00000562542 LILRA2Q8N149 483 aa16.28■□□□□ 0.2
KATNB1-202ENST00000562542 CPNE4Q96A23 557 aaPredicted RBP16.28■□□□□ 0.2
KATNB1-202ENST00000562542 PHF21BQ96EK2 531 aa16.28■□□□□ 0.2
KATNB1-202ENST00000562542 NSUN5Q96P11 429 aaKnown RBP16.28■□□□□ 0.2
KATNB1-202ENST00000562542 SLC35C2Q9NQQ7 365 aa16.28■□□□□ 0.2
KATNB1-202ENST00000562542 NPAP1Q9NZP6 1156 aa16.28■□□□□ 0.2
KATNB1-202ENST00000562542 GNG14A0A1W2PPG7 69 aa16.27■□□□□ 0.2
KATNB1-202ENST00000562542 A0A1W2PRB8 838 aa16.27■□□□□ 0.2
KATNB1-202ENST00000562542 ZNF814B7Z6K7 855 aa16.27■□□□□ 0.2
KATNB1-202ENST00000562542 PRKD3O94806 890 aa16.27■□□□□ 0.2
KATNB1-202ENST00000562542 YES1P07947 543 aa16.27■□□□□ 0.2
KATNB1-202ENST00000562542 SRP14P37108 136 aaKnown RBP16.27■□□□□ 0.2
KATNB1-202ENST00000562542 CR1LQ2VPA4 569 aa16.27■□□□□ 0.2
KATNB1-202ENST00000562542 GRAMD1BQ3KR37 738 aa16.27■□□□□ 0.2
KATNB1-202ENST00000562542 TMEM107Q6UX40 140 aa16.27■□□□□ 0.2
KATNB1-202ENST00000562542 APOOLQ6UXV4 268 aa16.27■□□□□ 0.2
KATNB1-202ENST00000562542 Q6ZT83 130 aa16.27■□□□□ 0.2
KATNB1-202ENST00000562542 DEPDC4Q8N2C3 294 aa16.27■□□□□ 0.2
KATNB1-202ENST00000562542 GATSQ8NAP1 163 aa16.27■□□□□ 0.2
KATNB1-202ENST00000562542 OR4F6Q8NGB9 312 aa16.27■□□□□ 0.2
KATNB1-202ENST00000562542 PIMREGQ9BSJ6 248 aa16.27■□□□□ 0.2
KATNB1-202ENST00000562542 PRR14Q9BWN1 585 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms