RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 NLGN3Q9NZ94 848 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 ATG4BQ9Y4P1 393 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 A0A1W2PR48 441 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 C7orf66A4D0T2 115 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 REM1O75628 298 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 SCO1O75880 301 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 SYPP08247 313 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 CD3GP09693 182 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 ERGP11308 486 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 CXCL3P19876 107 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 NPR2P20594 1047 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 GIFP27352 417 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 BDH1Q02338 343 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 RPA4Q13156 261 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 FGFBP1Q14512 234 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 POU4F3Q15319 338 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 PYHIN1Q6K0P9 492 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 MBOAT2Q6ZWT7 520 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 GID4Q8IVV7 300 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 SPERTQ8NA61 448 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 ZFP3Q96NJ6 502 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 DPCDQ9BVM2 203 aaPredicted RBP13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 UBQLN3Q9H347 655 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 ANKRD19PQ9H560 264 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 CHST2Q9Y4C5 530 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 NUBP2Q9Y5Y2 271 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 MYO10Q9HD67 2058 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 A0A1W2PPV9 198 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 LINC00862A6NCI5 91 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 SLC9B1P1A6NJY1 282 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 CDC42EP2O14613 210 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 EMC8O43402 210 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 FCMRO60667 390 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 FZD7O75084 574 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 CLEC3AO75596 197 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 TPOP07202 933 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 EPHA5P54756 1037 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 RGS1Q08116 209 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 C18orf63Q68DL7 685 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 ZNF765Q7L2R6 523 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 PCNPQ8WW12 178 aaKnown RBP13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 AICDAQ9GZX7 198 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 CLEC4MQ9H2X3 399 aaPredicted RBP13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 XKR8Q9H6D3 395 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 EIF3KQ9UBQ5 218 aaKnown RBP13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 SLC7A7Q9UM01 511 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 KIAA1549LQ6ZVL6 1849 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 LILRB3O75022 631 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 SOX30O94993 753 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 CSNK2A2P19784 350 aaPredicted RBP13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 TBXA2RP21731 343 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 SDHBP21912 280 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 THBS2P35442 1172 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 CLCNKAP51800 687 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 PRAMEF8Q5VWM4 474 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 PRAMEF7Q5VXH5 474 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 CD276Q5ZPR3 534 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 ADGRD2Q7Z7M1 963 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 LINC01555Q8NAE3 123 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 OR9A2Q8NGT5 310 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 HSD17B8Q92506 261 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 KAT2AQ92830 837 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 OR2M2Q96R28 347 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 FERD3LQ96RJ6 166 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 CACNG6Q9BXT2 260 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 SLCO1C1Q9NYB5 712 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 CALML5Q9NZT1 146 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 TCF20Q9UGU0 1960 aaKnown RBP13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 CXCL14O95715 111 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 THY1P04216 161 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 MRPL3P09001 348 aaKnown RBP13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 SLC35G4P0C7Q5 338 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 ADRB3P13945 408 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 PRKACBP22694 351 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 SSTR2P30874 369 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 ZNF81P51508 661 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 DPTQ07507 201 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 C6orf132Q5T0Z8 1188 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 MEPCEQ7L2J0 689 aaKnown RBP13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 LRRTM4Q86VH4 590 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 BEST4Q8NFU0 473 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 MOAP1Q96BY2 351 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 PITHD1Q9GZP4 211 aaPredicted RBP13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 CACYBPQ9HB71 228 aaKnown RBP13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 KRCC1Q9NPI7 259 aaPredicted RBP13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 HCFC2Q9Y5Z7 792 aa13.03□□□□□ -0.32
VPS9D1-202ENST00000561976 COL4A3Q01955 1670 aa13.02□□□□□ -0.32
VPS9D1-202ENST00000561976 E9PI62 339 aa13.02□□□□□ -0.32
VPS9D1-202ENST00000561976 SSNA1O43805 119 aa13.02□□□□□ -0.32
VPS9D1-202ENST00000561976 NFATC1O95644 943 aa13.02□□□□□ -0.32
VPS9D1-202ENST00000561976 AIFM1O95831 613 aa13.02□□□□□ -0.32
VPS9D1-202ENST00000561976 FUT1P19526 365 aa13.02□□□□□ -0.32
VPS9D1-202ENST00000561976 MPIP34949 423 aa13.02□□□□□ -0.32
VPS9D1-202ENST00000561976 ACVR1BP36896 505 aa13.02□□□□□ -0.32
VPS9D1-202ENST00000561976 CCR6P51684 374 aa13.02□□□□□ -0.32
VPS9D1-202ENST00000561976 PDX1P52945 283 aa13.02□□□□□ -0.32
VPS9D1-202ENST00000561976 DEFB103AP81534 67 aa13.02□□□□□ -0.32
VPS9D1-202ENST00000561976 ARHGEF6Q15052 776 aa13.02□□□□□ -0.32
VPS9D1-202ENST00000561976 COL28A1Q2UY09 1125 aa13.02□□□□□ -0.32
VPS9D1-202ENST00000561976 SLC25A35Q3KQZ1 300 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms