RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 CPN1P15169 458 aa11.76□□□□□ -0.53
CTDSPL2-209ENST00000560620 H2AFXP16104 143 aaPredicted RBP11.76□□□□□ -0.53
CTDSPL2-209ENST00000560620 POU3F2P20265 443 aaPredicted RBP11.76□□□□□ -0.53
CTDSPL2-209ENST00000560620 BMP5P22003 454 aa11.76□□□□□ -0.53
CTDSPL2-209ENST00000560620 UQCRC2P22695 453 aa11.76□□□□□ -0.53
CTDSPL2-209ENST00000560620 CHMP24386 653 aa11.76□□□□□ -0.53
CTDSPL2-209ENST00000560620 LCN1P31025 176 aa11.76□□□□□ -0.53
CTDSPL2-209ENST00000560620 ZNF41P51814 821 aaPredicted RBP11.76□□□□□ -0.53
CTDSPL2-209ENST00000560620 GFRA1P56159 465 aa11.76□□□□□ -0.53
CTDSPL2-209ENST00000560620 NSUN5P2Q63ZY6 315 aa11.76□□□□□ -0.53
CTDSPL2-209ENST00000560620 APOOLQ6UXV4 268 aa11.76□□□□□ -0.53
CTDSPL2-209ENST00000560620 MEX3BQ6ZN04 569 aaKnown RBP11.76□□□□□ -0.53
CTDSPL2-209ENST00000560620 C16orf62Q7Z3J2 963 aa11.76□□□□□ -0.53
CTDSPL2-209ENST00000560620 TRIML2Q8N7C3 387 aa11.76□□□□□ -0.53
CTDSPL2-209ENST00000560620 FADS6Q8N9I5 356 aa11.76□□□□□ -0.53
CTDSPL2-209ENST00000560620 TNIP2Q8NFZ5 429 aa11.76□□□□□ -0.53
CTDSPL2-209ENST00000560620 OR5M1Q8NGP8 315 aa11.76□□□□□ -0.53
CTDSPL2-209ENST00000560620 FAM110BQ8TC76 370 aa11.76□□□□□ -0.53
CTDSPL2-209ENST00000560620 PHOSPHO1Q8TCT1 267 aa11.76□□□□□ -0.53
CTDSPL2-209ENST00000560620 SMPDL3BQ92485 455 aa11.76□□□□□ -0.53
CTDSPL2-209ENST00000560620 C1GALT1C1Q96EU7 318 aa11.76□□□□□ -0.53
CTDSPL2-209ENST00000560620 TEX37Q96LM6 180 aa11.76□□□□□ -0.53
CTDSPL2-209ENST00000560620 OR52E6Q96RD3 313 aa11.76□□□□□ -0.53
CTDSPL2-209ENST00000560620 PANX1Q96RD7 426 aa11.76□□□□□ -0.53
CTDSPL2-209ENST00000560620 PIGQQ9BRB3 760 aa11.76□□□□□ -0.53
CTDSPL2-209ENST00000560620 INTS9Q9NV88 658 aaKnown RBP11.76□□□□□ -0.53
CTDSPL2-209ENST00000560620 EXD2Q9NVH0 621 aa11.76□□□□□ -0.53
CTDSPL2-209ENST00000560620 MRPS18CQ9Y3D5 142 aaKnown RBP11.76□□□□□ -0.53
CTDSPL2-209ENST00000560620 KCNE3Q9Y6H6 103 aa11.76□□□□□ -0.53
CTDSPL2-209ENST00000560620 USH1CQ9Y6N9 552 aa11.76□□□□□ -0.53
CTDSPL2-209ENST00000560620 CACNA1CQ13936 2221 aa11.76□□□□□ -0.53
CTDSPL2-209ENST00000560620 NPIPA5A0A0B4J1W7 369 aa11.75□□□□□ -0.53
CTDSPL2-209ENST00000560620 B4DXG7 233 aa11.75□□□□□ -0.53
CTDSPL2-209ENST00000560620 NPIPA7E9PJI5 369 aa11.75□□□□□ -0.53
CTDSPL2-209ENST00000560620 GTPBP1O00178 669 aaKnown RBP11.75□□□□□ -0.53
CTDSPL2-209ENST00000560620 DVL2O14641 736 aa11.75□□□□□ -0.53
CTDSPL2-209ENST00000560620 ANKRD28O15084 1053 aa11.75□□□□□ -0.53
CTDSPL2-209ENST00000560620 UBDO15205 165 aa11.75□□□□□ -0.53
CTDSPL2-209ENST00000560620 SEC14L5O43304 696 aa11.75□□□□□ -0.53
CTDSPL2-209ENST00000560620 HCRTR2O43614 444 aa11.75□□□□□ -0.53
CTDSPL2-209ENST00000560620 SLC22A3O75751 556 aa11.75□□□□□ -0.53
CTDSPL2-209ENST00000560620 NGFRP08138 427 aa11.75□□□□□ -0.53
CTDSPL2-209ENST00000560620 NPIPA8P0DM63 369 aa11.75□□□□□ -0.53
CTDSPL2-209ENST00000560620 RNF144AP50876 292 aaPredicted RBP11.75□□□□□ -0.53
CTDSPL2-209ENST00000560620 PPP2R2AP63151 447 aa11.75□□□□□ -0.53
CTDSPL2-209ENST00000560620 GPR68Q15743 365 aa11.75□□□□□ -0.53
CTDSPL2-209ENST00000560620 ATAD3BQ5T9A4 648 aa11.75□□□□□ -0.53
CTDSPL2-209ENST00000560620 TNFAIP8L2Q6P589 184 aaPredicted RBP11.75□□□□□ -0.53
CTDSPL2-209ENST00000560620 SEM1Q6ZVN7 128 aa11.75□□□□□ -0.53
CTDSPL2-209ENST00000560620 P4HA3Q7Z4N8 544 aa11.75□□□□□ -0.53
CTDSPL2-209ENST00000560620 MCEMP1Q8IX19 187 aa11.75□□□□□ -0.53
CTDSPL2-209ENST00000560620 MEIOBQ8N635 442 aa11.75□□□□□ -0.53
CTDSPL2-209ENST00000560620 ZPLD1Q8TCW7 415 aa11.75□□□□□ -0.53
CTDSPL2-209ENST00000560620 C7orf26Q96N11 449 aa11.75□□□□□ -0.53
CTDSPL2-209ENST00000560620 OR52B2Q96RD2 323 aa11.75□□□□□ -0.53
CTDSPL2-209ENST00000560620 TUBA1CQ9BQE3 449 aa11.75□□□□□ -0.53
CTDSPL2-209ENST00000560620 SLC35A5Q9BS91 424 aa11.75□□□□□ -0.53
CTDSPL2-209ENST00000560620 HOXD1Q9GZZ0 328 aa11.75□□□□□ -0.53
CTDSPL2-209ENST00000560620 OR51I1Q9H343 314 aa11.75□□□□□ -0.53
CTDSPL2-209ENST00000560620 ACBD3Q9H3P7 528 aa11.75□□□□□ -0.53
CTDSPL2-209ENST00000560620 SLCO1B3Q9NPD5 702 aa11.75□□□□□ -0.53
CTDSPL2-209ENST00000560620 STOML1Q9UBI4 398 aa11.75□□□□□ -0.53
CTDSPL2-209ENST00000560620 GPR45Q9Y5Y3 372 aa11.75□□□□□ -0.53
CTDSPL2-209ENST00000560620 MED12Q93074 2177 aa11.74□□□□□ -0.53
CTDSPL2-209ENST00000560620 OR2M5A3KFT3 312 aa11.74□□□□□ -0.53
CTDSPL2-209ENST00000560620 CD8B2A6NJW9 211 aa11.74□□□□□ -0.53
CTDSPL2-209ENST00000560620 CLCA1A8K7I4 914 aa11.74□□□□□ -0.53
CTDSPL2-209ENST00000560620 SHISA8B8ZZ34 492 aa11.74□□□□□ -0.53
CTDSPL2-209ENST00000560620 POLR3GO15318 223 aaPredicted RBP11.74□□□□□ -0.53
CTDSPL2-209ENST00000560620 TOXO94900 526 aa11.74□□□□□ -0.53
CTDSPL2-209ENST00000560620 ANP32DO95626 131 aa11.74□□□□□ -0.53
CTDSPL2-209ENST00000560620 PGRP06401 933 aa11.74□□□□□ -0.53
CTDSPL2-209ENST00000560620 PEPDP12955 493 aa11.74□□□□□ -0.53
CTDSPL2-209ENST00000560620 MSX1P28360 303 aa11.74□□□□□ -0.53
CTDSPL2-209ENST00000560620 TIMP3P35625 211 aa11.74□□□□□ -0.53
CTDSPL2-209ENST00000560620 LHX2P50458 406 aa11.74□□□□□ -0.53
CTDSPL2-209ENST00000560620 AGFG1P52594 562 aaKnown RBP11.74□□□□□ -0.53
CTDSPL2-209ENST00000560620 STX1BP61266 288 aa11.74□□□□□ -0.53
CTDSPL2-209ENST00000560620 PHC1P78364 1004 aa11.74□□□□□ -0.53
CTDSPL2-209ENST00000560620 HPCAP84074 193 aa11.74□□□□□ -0.53
CTDSPL2-209ENST00000560620 GSTA3Q16772 222 aa11.74□□□□□ -0.53
CTDSPL2-209ENST00000560620 SLC25A35Q3KQZ1 300 aa11.74□□□□□ -0.53
CTDSPL2-209ENST00000560620 EXOSC6Q5RKV6 272 aaKnown RBP11.74□□□□□ -0.53
CTDSPL2-209ENST00000560620 PPP4R4Q6NUP7 873 aa11.74□□□□□ -0.53
CTDSPL2-209ENST00000560620 ARSKQ6UWY0 536 aa11.74□□□□□ -0.53
CTDSPL2-209ENST00000560620 PLXDC2Q6UX71 529 aa11.74□□□□□ -0.53
CTDSPL2-209ENST00000560620 ZNF621Q6ZSS3 439 aa11.74□□□□□ -0.53
CTDSPL2-209ENST00000560620 MAVSQ7Z434 540 aa11.74□□□□□ -0.53
CTDSPL2-209ENST00000560620 GRAMD2AQ8IUY3 354 aa11.74□□□□□ -0.53
CTDSPL2-209ENST00000560620 LIX1LQ8IVB5 337 aa11.74□□□□□ -0.53
CTDSPL2-209ENST00000560620 MISPQ8IVT2 679 aa11.74□□□□□ -0.53
CTDSPL2-209ENST00000560620 TMCO5AQ8N6Q1 288 aa11.74□□□□□ -0.53
CTDSPL2-209ENST00000560620 GLB1L3Q8NCI6 653 aaPredicted RBP11.74□□□□□ -0.53
CTDSPL2-209ENST00000560620 B4GALNT2Q8NHY0 566 aa11.74□□□□□ -0.53
CTDSPL2-209ENST00000560620 ACTRT2Q8TDY3 377 aa11.74□□□□□ -0.53
CTDSPL2-209ENST00000560620 XAGE5Q8WWM1 108 aa11.74□□□□□ -0.53
CTDSPL2-209ENST00000560620 LRRC46Q96FV0 321 aa11.74□□□□□ -0.53
CTDSPL2-209ENST00000560620 MAELQ96JY0 434 aaKnown RBP11.74□□□□□ -0.53
CTDSPL2-209ENST00000560620 SH3GL2Q99962 352 aa11.74□□□□□ -0.53
CTDSPL2-209ENST00000560620 CALHM2Q9HA72 323 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms