RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 DRD5P21918 477 aa10.85□□□□□ -0.67
LDLR-212ENST00000560467 SSTR4P31391 388 aa10.85□□□□□ -0.67
LDLR-212ENST00000560467 PPICP45877 212 aa10.85□□□□□ -0.67
LDLR-212ENST00000560467 MS4A2Q01362 244 aa10.85□□□□□ -0.67
LDLR-212ENST00000560467 CHRNB3Q05901 458 aa10.85□□□□□ -0.67
LDLR-212ENST00000560467 PCOLCEQ15113 449 aa10.85□□□□□ -0.67
LDLR-212ENST00000560467 CDSNQ15517 529 aa10.85□□□□□ -0.67
LDLR-212ENST00000560467 C3AR1Q16581 482 aa10.85□□□□□ -0.67
LDLR-212ENST00000560467 CYP27C1Q4G0S4 372 aa10.85□□□□□ -0.67
LDLR-212ENST00000560467 PEX5LQ8IYB4 626 aa10.85□□□□□ -0.67
LDLR-212ENST00000560467 TAGAPQ8N103 731 aa10.85□□□□□ -0.67
LDLR-212ENST00000560467 SLC16A11Q8NCK7 471 aa10.85□□□□□ -0.67
LDLR-212ENST00000560467 OR52E4Q8NGH9 312 aa10.85□□□□□ -0.67
LDLR-212ENST00000560467 OR5D16Q8NGK9 328 aa10.85□□□□□ -0.67
LDLR-212ENST00000560467 C16orf52Q8NHV5 167 aa10.85□□□□□ -0.67
LDLR-212ENST00000560467 DOK4Q8TEW6 326 aa10.85□□□□□ -0.67
LDLR-212ENST00000560467 SLC38A5Q8WUX1 472 aa10.85□□□□□ -0.67
LDLR-212ENST00000560467 MAL2Q969L2 176 aa10.85□□□□□ -0.67
LDLR-212ENST00000560467 GAL3ST4Q96RP7 486 aa10.85□□□□□ -0.67
LDLR-212ENST00000560467 LMF2Q9BU23 707 aaKnown RBP10.85□□□□□ -0.67
LDLR-212ENST00000560467 DEFB126Q9BYW3 111 aa10.85□□□□□ -0.67
LDLR-212ENST00000560467 HOXD1Q9GZZ0 328 aa10.85□□□□□ -0.67
LDLR-212ENST00000560467 FOLH1BQ9HBA9 442 aa10.85□□□□□ -0.67
LDLR-212ENST00000560467 KLHL28Q9NXS3 571 aa10.85□□□□□ -0.67
LDLR-212ENST00000560467 TINAGQ9UJW2 476 aa10.85□□□□□ -0.67
LDLR-212ENST00000560467 AURKCQ9UQB9 309 aa10.85□□□□□ -0.67
LDLR-212ENST00000560467 TACC2O95359 2948 aa10.85□□□□□ -0.67
LDLR-212ENST00000560467 NF1P21359 2839 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 DCHS2Q6V1P9 2916 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 LOC102723996A0A087X1L8 192 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 DHRS12A0PJE2 317 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 A8MVJ9 347 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 TGFBR3LH3BV60 316 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 ACOX3O15254 700 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 SLC19A2O60779 497 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 ENTPD5O75356 428 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 SEC24DO94855 1032 aaPredicted RBP10.84□□□□□ -0.67
LDLR-212ENST00000560467 PGM3O95394 542 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 SERPINA1P01009 418 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 NUDT7P0C024 238 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 FCGR1AP12314 374 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 ETS2P15036 469 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 S1PR1P21453 382 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 AQP1P29972 269 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 RFX3P48380 749 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 CLK3P49761 638 aaKnown RBP10.84□□□□□ -0.67
LDLR-212ENST00000560467 EMDP50402 254 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 GZMMP51124 257 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 MVDP53602 400 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 SLC37A1P57057 533 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 KRTAP10-9P60411 292 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 LARS2Q15031 903 aaKnown RBP10.84□□□□□ -0.67
LDLR-212ENST00000560467 ADRM1Q16186 407 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 FXNQ16595 210 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 ZSWIM7Q19AV6 140 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 BTBD16Q32M84 506 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 ARHGAP11BQ3KRB8 267 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 MTFR2Q6P444 385 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 DGAT2L6Q6ZPD8 337 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 LRRC74BQ6ZQY2 392 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 LANCL3Q6ZV70 420 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 PTOV1Q86YD1 416 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 ARMC8Q8IUR7 673 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 ZNF615Q8N8J6 731 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 OR8K3Q8NH51 312 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 FBXO30Q8TB52 745 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 WDR60Q8WVS4 1066 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 PROX1Q92786 737 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 CDS1Q92903 461 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 TP53INP1Q96A56 240 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 HSPBAP1Q96EW2 488 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 SLC35A4Q96G79 324 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 TMEM19Q96HH6 336 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 LCORQ96JN0 433 aaPredicted RBP10.84□□□□□ -0.67
LDLR-212ENST00000560467 TREX2Q9BQ50 279 aaPredicted RBP10.84□□□□□ -0.67
LDLR-212ENST00000560467 RNF32Q9H0A6 362 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 ZNF700Q9H0M5 742 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 TSPAN10Q9H1Z9 355 aaPredicted RBP10.84□□□□□ -0.67
LDLR-212ENST00000560467 DCLRE1BQ9H816 532 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 ANKRA2Q9H9E1 313 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 CBLCQ9ULV8 474 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 IFT52Q9Y366 437 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 WDR45Q9Y484 360 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 AP4S1Q9Y587 144 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 PCNX1Q96RV3 2341 aa10.84□□□□□ -0.67
LDLR-212ENST00000560467 ITPR3Q14573 2671 aa10.83□□□□□ -0.68
LDLR-212ENST00000560467 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.83□□□□□ -0.68
LDLR-212ENST00000560467 IGHV3-20A0A0C4DH32 117 aa10.83□□□□□ -0.68
LDLR-212ENST00000560467 OR5H15A6NDH6 313 aa10.83□□□□□ -0.68
LDLR-212ENST00000560467 M0QX08 132 aa10.83□□□□□ -0.68
LDLR-212ENST00000560467 NKX2-2O95096 273 aa10.83□□□□□ -0.68
LDLR-212ENST00000560467 PSMG1O95456 288 aa10.83□□□□□ -0.68
LDLR-212ENST00000560467 BAG2O95816 211 aa10.83□□□□□ -0.68
LDLR-212ENST00000560467 ENDOUP21128 410 aaKnown RBP10.83□□□□□ -0.68
LDLR-212ENST00000560467 IL12BP29460 328 aa10.83□□□□□ -0.68
LDLR-212ENST00000560467 SLC7A1P30825 629 aa10.83□□□□□ -0.68
LDLR-212ENST00000560467 LCN1P31025 176 aa10.83□□□□□ -0.68
LDLR-212ENST00000560467 IFNA8P32881 189 aa10.83□□□□□ -0.68
LDLR-212ENST00000560467 TRHRP34981 398 aaPredicted RBP10.83□□□□□ -0.68
LDLR-212ENST00000560467 ST13P50502 369 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms