RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 HMGN2P05204 90 aaKnown RBP13.3□□□□□ -0.28
IDH3A-219ENST00000560414 THBS1P07996 1170 aa13.3□□□□□ -0.28
IDH3A-219ENST00000560414 ALOX5P09917 674 aa13.3□□□□□ -0.28
IDH3A-219ENST00000560414 MYZAPP0CAP1 466 aa13.3□□□□□ -0.28
IDH3A-219ENST00000560414 HK1P19367 917 aa13.3□□□□□ -0.28
IDH3A-219ENST00000560414 PRPS1L1P21108 318 aa13.3□□□□□ -0.28
IDH3A-219ENST00000560414 CHMP24386 653 aa13.3□□□□□ -0.28
IDH3A-219ENST00000560414 CLK3P49761 638 aaKnown RBP13.3□□□□□ -0.28
IDH3A-219ENST00000560414 RPL14P50914 215 aaKnown RBP13.3□□□□□ -0.28
IDH3A-219ENST00000560414 DIO3P55073 304 aa13.3□□□□□ -0.28
IDH3A-219ENST00000560414 CLDN18P56856 261 aa13.3□□□□□ -0.28
IDH3A-219ENST00000560414 PRR5P85299 388 aa13.3□□□□□ -0.28
IDH3A-219ENST00000560414 STX3Q13277 289 aa13.3□□□□□ -0.28
IDH3A-219ENST00000560414 LASP1Q14847 261 aaKnown RBP13.3□□□□□ -0.28
IDH3A-219ENST00000560414 EXOSC6Q5RKV6 272 aaKnown RBP13.3□□□□□ -0.28
IDH3A-219ENST00000560414 CCNJQ5T5M9 372 aa13.3□□□□□ -0.28
IDH3A-219ENST00000560414 RAET1LQ5VY80 246 aa13.3□□□□□ -0.28
IDH3A-219ENST00000560414 CROCCP2Q86T23 111 aa13.3□□□□□ -0.28
IDH3A-219ENST00000560414 GATSQ8NAP1 163 aa13.3□□□□□ -0.28
IDH3A-219ENST00000560414 MBD3L2Q8NHZ7 208 aaPredicted RBP13.3□□□□□ -0.28
IDH3A-219ENST00000560414 FAM110BQ8TC76 370 aa13.3□□□□□ -0.28
IDH3A-219ENST00000560414 OR5P2Q8WZ92 322 aa13.3□□□□□ -0.28
IDH3A-219ENST00000560414 ZNF837Q96EG3 531 aaPredicted RBP13.3□□□□□ -0.28
IDH3A-219ENST00000560414 CHMP6Q96FZ7 201 aa13.3□□□□□ -0.28
IDH3A-219ENST00000560414 PRPF18Q99633 342 aaKnown RBP13.3□□□□□ -0.28
IDH3A-219ENST00000560414 ATAD3AQ9NVI7 634 aa13.3□□□□□ -0.28
IDH3A-219ENST00000560414 PNPOQ9NVS9 261 aa13.3□□□□□ -0.28
IDH3A-219ENST00000560414 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.3□□□□□ -0.28
IDH3A-219ENST00000560414 POLQO75417 2590 aa13.3□□□□□ -0.28
IDH3A-219ENST00000560414 CLCA1A8K7I4 914 aa13.29□□□□□ -0.28
IDH3A-219ENST00000560414 CFLARO15519 480 aa13.29□□□□□ -0.28
IDH3A-219ENST00000560414 OXSR1O95747 527 aaPredicted RBP13.29□□□□□ -0.28
IDH3A-219ENST00000560414 ZNF708P17019 499 aa13.29□□□□□ -0.28
IDH3A-219ENST00000560414 UQCRC1P31930 480 aa13.29□□□□□ -0.28
IDH3A-219ENST00000560414 CCT3P49368 545 aaKnown RBP13.29□□□□□ -0.28
IDH3A-219ENST00000560414 PRIM2P49643 509 aa13.29□□□□□ -0.28
IDH3A-219ENST00000560414 DGKQP52824 942 aa13.29□□□□□ -0.28
IDH3A-219ENST00000560414 CLDN8P56748 225 aa13.29□□□□□ -0.28
IDH3A-219ENST00000560414 BST1Q10588 318 aa13.29□□□□□ -0.28
IDH3A-219ENST00000560414 FOXF2Q12947 444 aa13.29□□□□□ -0.28
IDH3A-219ENST00000560414 MYBPHQ13203 477 aa13.29□□□□□ -0.28
IDH3A-219ENST00000560414 MAD2L1Q13257 205 aaPredicted RBP13.29□□□□□ -0.28
IDH3A-219ENST00000560414 TP53BP2Q13625 1128 aa13.29□□□□□ -0.28
IDH3A-219ENST00000560414 PGS1Q32NB8 556 aa13.29□□□□□ -0.28
IDH3A-219ENST00000560414 SPDYE7PQ495Y7 208 aa13.29□□□□□ -0.28
IDH3A-219ENST00000560414 HHATQ5VTY9 493 aa13.29□□□□□ -0.28
IDH3A-219ENST00000560414 ZCCHC12Q6PEW1 402 aa13.29□□□□□ -0.28
IDH3A-219ENST00000560414 ARSKQ6UWY0 536 aa13.29□□□□□ -0.28
IDH3A-219ENST00000560414 BTLAQ7Z6A9 289 aa13.29□□□□□ -0.28
IDH3A-219ENST00000560414 ADGRE4PQ86SQ3 457 aa13.29□□□□□ -0.28
IDH3A-219ENST00000560414 TREML1Q86YW5 311 aa13.29□□□□□ -0.28
IDH3A-219ENST00000560414 UBQLNLQ8IYU4 475 aa13.29□□□□□ -0.28
IDH3A-219ENST00000560414 COX18Q8N8Q8 333 aa13.29□□□□□ -0.28
IDH3A-219ENST00000560414 MGARPQ8TDB4 240 aa13.29□□□□□ -0.28
IDH3A-219ENST00000560414 CDS1Q92903 461 aa13.29□□□□□ -0.28
IDH3A-219ENST00000560414 C1GALT1C1Q96EU7 318 aa13.29□□□□□ -0.28
IDH3A-219ENST00000560414 DTNBP1Q96EV8 351 aa13.29□□□□□ -0.28
IDH3A-219ENST00000560414 DOCK7Q96N67 2140 aa13.29□□□□□ -0.28
IDH3A-219ENST00000560414 DUSP26Q9BV47 211 aa13.29□□□□□ -0.28
IDH3A-219ENST00000560414 NUF2Q9BZD4 464 aa13.29□□□□□ -0.28
IDH3A-219ENST00000560414 PTGES2Q9H7Z7 377 aa13.29□□□□□ -0.28
IDH3A-219ENST00000560414 MCCC2Q9HCC0 563 aa13.29□□□□□ -0.28
IDH3A-219ENST00000560414 NOP53Q9NZM5 478 aaKnown RBP13.29□□□□□ -0.28
IDH3A-219ENST00000560414 ZNF629Q9UEG4 869 aaPredicted RBP13.29□□□□□ -0.28
IDH3A-219ENST00000560414 ZNF337Q9Y3M9 751 aa13.29□□□□□ -0.28
IDH3A-219ENST00000560414 L3MBTL1Q9Y468 752 aa13.29□□□□□ -0.28
IDH3A-219ENST00000560414 TMEM120BA0PK00 339 aa13.28□□□□□ -0.28
IDH3A-219ENST00000560414 OR2M5A3KFT3 312 aa13.28□□□□□ -0.28
IDH3A-219ENST00000560414 SHISA8B8ZZ34 492 aa13.28□□□□□ -0.28
IDH3A-219ENST00000560414 ALG1L2C9J202 215 aa13.28□□□□□ -0.28
IDH3A-219ENST00000560414 H0YC42 278 aa13.28□□□□□ -0.28
IDH3A-219ENST00000560414 SYT5O00445 386 aa13.28□□□□□ -0.28
IDH3A-219ENST00000560414 TMIGD3P0DMS9 266 aaPredicted RBP13.28□□□□□ -0.28
IDH3A-219ENST00000560414 TBXA2RP21731 343 aa13.28□□□□□ -0.28
IDH3A-219ENST00000560414 CTSSP25774 331 aa13.28□□□□□ -0.28
IDH3A-219ENST00000560414 ASCL1P50553 236 aa13.28□□□□□ -0.28
IDH3A-219ENST00000560414 TPD52P55327 224 aaPredicted RBP13.28□□□□□ -0.28
IDH3A-219ENST00000560414 HBA1P69905 142 aa13.28□□□□□ -0.28
IDH3A-219ENST00000560414 POU6F2P78424 691 aaPredicted RBP13.28□□□□□ -0.28
IDH3A-219ENST00000560414 C17orf67Q0P5P2 114 aa13.28□□□□□ -0.28
IDH3A-219ENST00000560414 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.28□□□□□ -0.28
IDH3A-219ENST00000560414 LSM12Q3MHD2 195 aaKnown RBP13.28□□□□□ -0.28
IDH3A-219ENST00000560414 SAMD5Q5TGI4 173 aa13.28□□□□□ -0.28
IDH3A-219ENST00000560414 OR4F3Q6IEY1 312 aa13.28□□□□□ -0.28
IDH3A-219ENST00000560414 CLECL1Q8IZS7 167 aa13.28□□□□□ -0.28
IDH3A-219ENST00000560414 OR5AK3PQ8NH89 298 aa13.28□□□□□ -0.28
IDH3A-219ENST00000560414 PSMA8Q8TAA3 256 aa13.28□□□□□ -0.28
IDH3A-219ENST00000560414 SH3GL2Q99962 352 aa13.28□□□□□ -0.28
IDH3A-219ENST00000560414 ZNF559Q9BR84 538 aa13.28□□□□□ -0.28
IDH3A-219ENST00000560414 BTBD2Q9BX70 525 aa13.28□□□□□ -0.28
IDH3A-219ENST00000560414 BHLHE41Q9C0J9 482 aaPredicted RBP13.28□□□□□ -0.28
IDH3A-219ENST00000560414 PIGUQ9H490 435 aa13.28□□□□□ -0.28
IDH3A-219ENST00000560414 GPATCH2Q9NW75 528 aa13.28□□□□□ -0.28
IDH3A-219ENST00000560414 ASIC5Q9NY37 505 aa13.28□□□□□ -0.28
IDH3A-219ENST00000560414 CLCF1Q9UBD9 225 aa13.28□□□□□ -0.28
IDH3A-219ENST00000560414 HAO1Q9UJM8 370 aa13.28□□□□□ -0.28
IDH3A-219ENST00000560414 KCNE3Q9Y6H6 103 aa13.28□□□□□ -0.28
IDH3A-219ENST00000560414 IGLV3-32A0A0A0MS00 114 aa13.27□□□□□ -0.29
IDH3A-219ENST00000560414 ENO4A6NNW6 628 aa13.27□□□□□ -0.29
IDH3A-219ENST00000560414 EEF1E1-BLOC1S5C9J1V9 151 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms