RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 TRIM2Q9C040 744 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 B4GALT7Q9UBV7 327 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 CMAHPQ9Y471 501 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 CEP250Q9BV73 2442 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 PLD2O14939 933 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 ZFAND5O76080 213 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 BMP4P12644 408 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 CD1CP29017 333 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 CCL7P80098 99 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 TRAM2Q15035 370 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 AKIRIN2Q53H80 203 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 IDNKQ5T6J7 187 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 PAPD4Q6PIY7 484 aaKnown RBP9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 KIAA0907Q7Z7F0 614 aaPredicted RBP9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 ABI3BPQ7Z7G0 1075 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 BAHD1Q8TBE0 780 aaPredicted RBP9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 PCDHA9Q9Y5H5 950 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 CACNA1GO43497 2377 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 NPIPA5A0A0B4J1W7 369 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 AGAP5A6NIR3 686 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 NPIPA7E9PJI5 369 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 PLPP1O14494 284 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 OR5F1O95221 314 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 NPIPA8P0DM63 369 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 GMFBP60983 142 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 PDSS1Q5T2R2 415 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 CCNJQ5T5M9 372 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 TMEM225Q6GV28 225 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 GPAT4Q86UL3 456 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 AQP11Q8NBQ7 271 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 PSD4Q8NDX1 1056 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 RPL3LQ92901 407 aaKnown RBP9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 NUDT22Q9BRQ3 303 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 SMURF1Q9HCE7 757 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 TRBV11-1A0A0K0K1C0 115 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 A0A1B0GX78 115 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 PPM1DO15297 605 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 SOX14O95416 240 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 ENDOUP21128 410 aaKnown RBP9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 HOXC12P31275 282 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 STARD6P59095 220 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 TNFRSF17Q02223 184 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 PLK5Q496M5 336 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 AGAP6Q5VW22 663 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 CES4AQ5XG92 561 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 ADNP2Q6IQ32 1131 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 WASH2PQ6VEQ5 465 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 VTCN1Q7Z7D3 282 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 TSPYL5Q86VY4 417 aaPredicted RBP9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 AGAP4Q96P64 663 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 ERMAPQ96PL5 475 aaPredicted RBP9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 TUBB1Q9H4B7 451 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 WASH6PQ9NQA3 447 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 COQ3Q9NZJ6 369 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 NUFIP1Q9UHK0 495 aaKnown RBP9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 ANK1P16157 1881 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 INMT-MINDY4F8WBC2 141 aa9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 ZNF823P16415 610 aa9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 PGCP20142 388 aa9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 PRKACBP22694 351 aa9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 EPHA8P29322 1005 aaPredicted RBP9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 ERP29P30040 261 aaKnown RBP9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 NUP62P37198 522 aaPredicted RBP9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 HNRNPA0Q13151 305 aaKnown RBP9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 RPS26P11Q5JNZ5 115 aaPredicted RBP9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 TMEM71Q6P5X7 295 aa9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 OR6N1Q8NGY5 312 aa9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 OR51A7Q8NH64 312 aa9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 OR1F2PQ96R84 312 aa9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 SEC14L5O43304 696 aa9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 RCBTB2O95199 551 aa9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 DBIP07108 87 aaKnown RBP9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 CKMT1AP12532 417 aa9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 TNFRSF1BP20333 461 aa9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 ARG2P78540 354 aa9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 TCEAL6Q6IPX3 200 aa9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 SPRED1Q7Z699 444 aa9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 DEFB124Q8NES8 71 aa9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 TCEAL3Q969E4 200 aa9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 MS4A6EQ96DS6 147 aa9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 COX14Q96I36 57 aa9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 RACGAP1Q9H0H5 632 aa9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 SLITRK2Q9H156 845 aa9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 SEC61A2Q9H9S3 476 aa9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 SLAMF8Q9P0V8 285 aa9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 NUDT21O43809 227 aaKnown RBP9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 RLN1P04808 185 aa9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 ELOAQ14241 798 aaKnown RBP9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 SF3A2Q15428 464 aaKnown RBP9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 ZNF750Q32MQ0 723 aa9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 IL20RBQ6UXL0 311 aa9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 PAPD5Q8NDF8 572 aaKnown RBP9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 SNX33Q8WV41 574 aa9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 GTF2H4Q92759 462 aa9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 TESCQ96BS2 214 aa9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 TM4SF18Q96CE8 201 aa9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 CLMPQ9H6B4 373 aa9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 PLAC1Q9HBJ0 212 aa9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 DNAJC27Q9NZQ0 273 aa9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 SEC14L4Q9UDX3 406 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms