RNA–Protein interactions for RNA: ENST00000558937.1

SMAD6-203, Transcript of SMAD family member 6, humanhuman

TSL 5

Gene SMAD6, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-203ENST00000558937 ZNF845Q96IR2 970 aaPredicted RBP13.61□□□□□ -0.23
SMAD6-203ENST00000558937 PKNOX2Q96KN3 472 aa13.61□□□□□ -0.23
SMAD6-203ENST00000558937 CCM2LQ9NUG4 571 aaPredicted RBP13.61□□□□□ -0.23
SMAD6-203ENST00000558937 VDAC3Q9Y277 283 aa13.61□□□□□ -0.23
SMAD6-203ENST00000558937 PLEKHA6Q9Y2H5 1048 aa13.61□□□□□ -0.23
SMAD6-203ENST00000558937 ZNF175Q9Y473 711 aa13.61□□□□□ -0.23
SMAD6-203ENST00000558937 NUP214P35658 2090 aaPredicted RBP13.6□□□□□ -0.23
SMAD6-203ENST00000558937 A0A1W2PRB8 838 aa13.6□□□□□ -0.23
SMAD6-203ENST00000558937 A8MXE2 369 aa13.6□□□□□ -0.23
SMAD6-203ENST00000558937 MSTNO14793 375 aa13.6□□□□□ -0.23
SMAD6-203ENST00000558937 TNFRSF21O75509 655 aa13.6□□□□□ -0.23
SMAD6-203ENST00000558937 SMNDC1O75940 238 aaKnown RBP eCLIP13.6□□□□□ -0.23
SMAD6-203ENST00000558937 HMGN2P05204 90 aaKnown RBP13.6□□□□□ -0.23
SMAD6-203ENST00000558937 TBXA2RP21731 343 aa13.6□□□□□ -0.23
SMAD6-203ENST00000558937 PRRC2AP48634 2157 aaKnown RBP13.6□□□□□ -0.23
SMAD6-203ENST00000558937 SIRPAP78324 504 aa13.6□□□□□ -0.23
SMAD6-203ENST00000558937 POU6F2P78424 691 aaPredicted RBP13.6□□□□□ -0.23
SMAD6-203ENST00000558937 LASP1Q14847 261 aaKnown RBP13.6□□□□□ -0.23
SMAD6-203ENST00000558937 KRT71Q3SY84 523 aa13.6□□□□□ -0.23
SMAD6-203ENST00000558937 IL23RQ5VWK5 629 aa13.6□□□□□ -0.23
SMAD6-203ENST00000558937 FBXW10Q5XX13 1052 aa13.6□□□□□ -0.23
SMAD6-203ENST00000558937 MREGQ8N565 214 aa13.6□□□□□ -0.23
SMAD6-203ENST00000558937 METTL25Q8N6Q8 603 aa13.6□□□□□ -0.23
SMAD6-203ENST00000558937 CNEP1R1Q8N9A8 125 aa13.6□□□□□ -0.23
SMAD6-203ENST00000558937 FNDC5Q8NAU1 212 aa13.6□□□□□ -0.23
SMAD6-203ENST00000558937 FNDC9Q8TBE3 224 aa13.6□□□□□ -0.23
SMAD6-203ENST00000558937 NUDT8Q8WV74 236 aa13.6□□□□□ -0.23
SMAD6-203ENST00000558937 STARD4Q96DR4 205 aa13.6□□□□□ -0.23
SMAD6-203ENST00000558937 CHMP6Q96FZ7 201 aa13.6□□□□□ -0.23
SMAD6-203ENST00000558937 FOXC2Q99958 501 aa13.6□□□□□ -0.23
SMAD6-203ENST00000558937 SNX8Q9Y5X2 465 aa13.6□□□□□ -0.23
SMAD6-203ENST00000558937 AP4B1Q9Y6B7 739 aa13.6□□□□□ -0.23
SMAD6-203ENST00000558937 SH3D21A4FU49 640 aa13.59□□□□□ -0.23
SMAD6-203ENST00000558937 LYPLA1O75608 230 aaPredicted RBP13.59□□□□□ -0.23
SMAD6-203ENST00000558937 GOSR1O95249 250 aa13.59□□□□□ -0.23
SMAD6-203ENST00000558937 C6orf47O95873 294 aa13.59□□□□□ -0.23
SMAD6-203ENST00000558937 ZNF17P17021 662 aa13.59□□□□□ -0.23
SMAD6-203ENST00000558937 LCN1P31025 176 aa13.59□□□□□ -0.23
SMAD6-203ENST00000558937 KIR2DL2P43627 348 aaPredicted RBP13.59□□□□□ -0.23
SMAD6-203ENST00000558937 SERPINB4P48594 390 aa13.59□□□□□ -0.23
SMAD6-203ENST00000558937 RPS3AP61247 264 aaKnown RBP13.59□□□□□ -0.23
SMAD6-203ENST00000558937 ZNF844Q08AG5 666 aa13.59□□□□□ -0.23
SMAD6-203ENST00000558937 PON3Q15166 354 aa13.59□□□□□ -0.23
SMAD6-203ENST00000558937 POU4F3Q15319 338 aa13.59□□□□□ -0.23
SMAD6-203ENST00000558937 CPTPQ5TA50 214 aa13.59□□□□□ -0.23
SMAD6-203ENST00000558937 PAMR1Q6UXH9 720 aa13.59□□□□□ -0.23
SMAD6-203ENST00000558937 BTLAQ7Z6A9 289 aa13.59□□□□□ -0.23
SMAD6-203ENST00000558937 GGNQ86UU5 652 aa13.59□□□□□ -0.23
SMAD6-203ENST00000558937 KRTCAP2Q8N6L1 136 aa13.59□□□□□ -0.23
SMAD6-203ENST00000558937 PSMA8Q8TAA3 256 aa13.59□□□□□ -0.23
SMAD6-203ENST00000558937 OR5P2Q8WZ92 322 aa13.59□□□□□ -0.23
SMAD6-203ENST00000558937 CDS1Q92903 461 aa13.59□□□□□ -0.23
SMAD6-203ENST00000558937 TUBGCP3Q96CW5 907 aa13.59□□□□□ -0.23
SMAD6-203ENST00000558937 SH3YL1Q96HL8 342 aaPredicted RBP13.59□□□□□ -0.23
SMAD6-203ENST00000558937 DACH2Q96NX9 599 aa13.59□□□□□ -0.23
SMAD6-203ENST00000558937 STACQ99469 402 aa13.59□□□□□ -0.23
SMAD6-203ENST00000558937 NPAS1Q99742 590 aa13.59□□□□□ -0.23
SMAD6-203ENST00000558937 BTBD2Q9BX70 525 aa13.59□□□□□ -0.23
SMAD6-203ENST00000558937 CXXC4Q9H2H0 198 aa13.59□□□□□ -0.23
SMAD6-203ENST00000558937 CXorf36Q9H7Y0 433 aa13.59□□□□□ -0.23
SMAD6-203ENST00000558937 RNF122Q9H9V4 155 aa13.59□□□□□ -0.23
SMAD6-203ENST00000558937 HHATLQ9HCP6 504 aa13.59□□□□□ -0.23
SMAD6-203ENST00000558937 UBQLN4Q9NRR5 601 aa13.59□□□□□ -0.23
SMAD6-203ENST00000558937 DUSP22Q9NRW4 184 aa13.59□□□□□ -0.23
SMAD6-203ENST00000558937 ATAD3AQ9NVI7 634 aa13.59□□□□□ -0.23
SMAD6-203ENST00000558937 A0A087WZY1 265 aa13.58□□□□□ -0.24
SMAD6-203ENST00000558937 WDR91A4D1P6 747 aa13.58□□□□□ -0.24
SMAD6-203ENST00000558937 CTIFO43310 598 aaKnown RBP13.58□□□□□ -0.24
SMAD6-203ENST00000558937 ITM2AO43736 263 aa13.58□□□□□ -0.24
SMAD6-203ENST00000558937 HSPA4LO95757 839 aa13.58□□□□□ -0.24
SMAD6-203ENST00000558937 HRGP04196 525 aa13.58□□□□□ -0.24
SMAD6-203ENST00000558937 DNASE1P24855 282 aa13.58□□□□□ -0.24
SMAD6-203ENST00000558937 TP53BP2Q13625 1128 aa13.58□□□□□ -0.24
SMAD6-203ENST00000558937 CD226Q15762 336 aa13.58□□□□□ -0.24
SMAD6-203ENST00000558937 SPDYE7PQ495Y7 208 aa13.58□□□□□ -0.24
SMAD6-203ENST00000558937 CDC73Q6P1J9 531 aa13.58□□□□□ -0.24
SMAD6-203ENST00000558937 NUDCD3Q8IVD9 361 aa13.58□□□□□ -0.24
SMAD6-203ENST00000558937 MISPQ8IVT2 679 aa13.58□□□□□ -0.24
SMAD6-203ENST00000558937 RIMKLAQ8IXN7 391 aa13.58□□□□□ -0.24
SMAD6-203ENST00000558937 GTPBP8Q8N3Z3 284 aaPredicted RBP13.58□□□□□ -0.24
SMAD6-203ENST00000558937 OR56A1Q8NGH5 318 aa13.58□□□□□ -0.24
SMAD6-203ENST00000558937 PPP1R14CQ8TAE6 165 aa13.58□□□□□ -0.24
SMAD6-203ENST00000558937 SFXN5Q8TD22 340 aa13.58□□□□□ -0.24
SMAD6-203ENST00000558937 COQ8BQ96D53 544 aa13.58□□□□□ -0.24
SMAD6-203ENST00000558937 PGM2Q96G03 612 aa13.58□□□□□ -0.24
SMAD6-203ENST00000558937 KLHDC3Q9BQ90 382 aa13.58□□□□□ -0.24
SMAD6-203ENST00000558937 OPN3Q9H1Y3 402 aaPredicted RBP13.58□□□□□ -0.24
SMAD6-203ENST00000558937 PIGUQ9H490 435 aa13.58□□□□□ -0.24
SMAD6-203ENST00000558937 MED17Q9NVC6 651 aa13.58□□□□□ -0.24
SMAD6-203ENST00000558937 EIF3LQ9Y262 564 aaKnown RBP13.58□□□□□ -0.24
SMAD6-203ENST00000558937 TESMINQ9Y4I5 508 aa13.58□□□□□ -0.24
SMAD6-203ENST00000558937 CELSR1Q9NYQ6 3014 aa13.58□□□□□ -0.24
SMAD6-203ENST00000558937 NPIPA5A0A0B4J1W7 369 aa13.57□□□□□ -0.24
SMAD6-203ENST00000558937 A0A1W2PQD3 144 aa13.57□□□□□ -0.24
SMAD6-203ENST00000558937 C7orf72A4D263 438 aa13.57□□□□□ -0.24
SMAD6-203ENST00000558937 NPIPA7E9PJI5 369 aa13.57□□□□□ -0.24
SMAD6-203ENST00000558937 SCDO00767 359 aa13.57□□□□□ -0.24
SMAD6-203ENST00000558937 EIF1AYO14602 144 aaKnown RBP13.57□□□□□ -0.24
SMAD6-203ENST00000558937 RGS16O15492 202 aaPredicted RBP13.57□□□□□ -0.24
SMAD6-203ENST00000558937 AQP8O94778 261 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms