RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 NKX2-8O15522 239 aa13.67□□□□□ -0.22
VPS18-202ENST00000558474 RRP8O43159 456 aaKnown RBP13.67□□□□□ -0.22
VPS18-202ENST00000558474 TPST1O60507 370 aa13.67□□□□□ -0.22
VPS18-202ENST00000558474 UGT2B11O75310 529 aa13.67□□□□□ -0.22
VPS18-202ENST00000558474 FASP25445 335 aa13.67□□□□□ -0.22
VPS18-202ENST00000558474 SNTA1Q13424 505 aa13.67□□□□□ -0.22
VPS18-202ENST00000558474 RCN1Q15293 331 aa13.67□□□□□ -0.22
VPS18-202ENST00000558474 ACER2Q5QJU3 275 aa13.67□□□□□ -0.22
VPS18-202ENST00000558474 FNDC7Q5VTL7 733 aa13.67□□□□□ -0.22
VPS18-202ENST00000558474 ERMP1Q7Z2K6 904 aa13.67□□□□□ -0.22
VPS18-202ENST00000558474 ZDHHC21Q8IVQ6 265 aa13.67□□□□□ -0.22
VPS18-202ENST00000558474 APLFQ8IW19 511 aaPredicted RBP13.67□□□□□ -0.22
VPS18-202ENST00000558474 PRR22Q8IZ63 422 aa13.67□□□□□ -0.22
VPS18-202ENST00000558474 GALNT16Q8N428 558 aa13.67□□□□□ -0.22
VPS18-202ENST00000558474 BRIX1Q8TDN6 353 aaKnown RBP13.67□□□□□ -0.22
VPS18-202ENST00000558474 GATA6Q92908 595 aa13.67□□□□□ -0.22
VPS18-202ENST00000558474 SGCZQ96LD1 299 aa13.67□□□□□ -0.22
VPS18-202ENST00000558474 ZBTB20Q9HC78 741 aaPredicted RBP13.67□□□□□ -0.22
VPS18-202ENST00000558474 EXOSC3Q9NQT5 275 aaKnown RBP13.67□□□□□ -0.22
VPS18-202ENST00000558474 SH3GLB1Q9Y371 365 aa13.67□□□□□ -0.22
VPS18-202ENST00000558474 CPAMD8Q8IZJ3 1885 aa13.67□□□□□ -0.22
VPS18-202ENST00000558474 PIEZO1Q92508 2521 aa13.66□□□□□ -0.22
VPS18-202ENST00000558474 EFSO43281 561 aa13.66□□□□□ -0.22
VPS18-202ENST00000558474 FADS1O60427 444 aa13.66□□□□□ -0.22
VPS18-202ENST00000558474 EIF4E2O60573 245 aaKnown RBP13.66□□□□□ -0.22
VPS18-202ENST00000558474 ZNF354AO60765 605 aaPredicted RBP13.66□□□□□ -0.22
VPS18-202ENST00000558474 FMO6PO60774 539 aa13.66□□□□□ -0.22
VPS18-202ENST00000558474 ICOSLGO75144 302 aa13.66□□□□□ -0.22
VPS18-202ENST00000558474 DEAF1O75398 565 aaPredicted RBP13.66□□□□□ -0.22
VPS18-202ENST00000558474 CAPNS1P04632 268 aa13.66□□□□□ -0.22
VPS18-202ENST00000558474 ANPEPP15144 967 aa13.66□□□□□ -0.22
VPS18-202ENST00000558474 RHCEP18577 417 aa13.66□□□□□ -0.22
VPS18-202ENST00000558474 ITGA3P26006 1051 aa13.66□□□□□ -0.22
VPS18-202ENST00000558474 EVI2BP34910 448 aa13.66□□□□□ -0.22
VPS18-202ENST00000558474 EIF2S3P41091 472 aaKnown RBP13.66□□□□□ -0.22
VPS18-202ENST00000558474 ERFP50548 548 aa13.66□□□□□ -0.22
VPS18-202ENST00000558474 ATP6AP1Q15904 470 aa13.66□□□□□ -0.22
VPS18-202ENST00000558474 MRPL2Q5T653 305 aaKnown RBP13.66□□□□□ -0.22
VPS18-202ENST00000558474 BROXQ5VW32 411 aa13.66□□□□□ -0.22
VPS18-202ENST00000558474 ZNF550Q7Z398 422 aa13.66□□□□□ -0.22
VPS18-202ENST00000558474 CYP4Z1Q86W10 505 aa13.66□□□□□ -0.22
VPS18-202ENST00000558474 CARM1Q86X55 608 aa13.66□□□□□ -0.22
VPS18-202ENST00000558474 PQLC1Q8N2U9 271 aa13.66□□□□□ -0.22
VPS18-202ENST00000558474 TMEM156Q8N614 296 aa13.66□□□□□ -0.22
VPS18-202ENST00000558474 FAM71CQ8NEG0 241 aa13.66□□□□□ -0.22
VPS18-202ENST00000558474 ZNF300Q96RE9 604 aaPredicted RBP13.66□□□□□ -0.22
VPS18-202ENST00000558474 BDH2Q9BUT1 245 aa13.66□□□□□ -0.22
VPS18-202ENST00000558474 RSPO3Q9BXY4 272 aaPredicted RBP13.66□□□□□ -0.22
VPS18-202ENST00000558474 TBL1XR1Q9BZK7 514 aa13.66□□□□□ -0.22
VPS18-202ENST00000558474 SDHAF3Q9NRP4 125 aa13.66□□□□□ -0.22
VPS18-202ENST00000558474 AGPAT4Q9NRZ5 378 aa13.66□□□□□ -0.22
VPS18-202ENST00000558474 CHST2Q9Y4C5 530 aa13.66□□□□□ -0.22
VPS18-202ENST00000558474 ENPP4Q9Y6X5 453 aa13.66□□□□□ -0.22
VPS18-202ENST00000558474 V9GYQ6 96 aa13.66□□□□□ -0.22
VPS18-202ENST00000558474 NPIPA5A0A0B4J1W7 369 aa13.65□□□□□ -0.22
VPS18-202ENST00000558474 ANKRD33BA6NCL7 494 aa13.65□□□□□ -0.22
VPS18-202ENST00000558474 ARGFXA6NJG6 315 aa13.65□□□□□ -0.22
VPS18-202ENST00000558474 NPIPA7E9PJI5 369 aa13.65□□□□□ -0.22
VPS18-202ENST00000558474 CLOCKO15516 846 aa13.65□□□□□ -0.22
VPS18-202ENST00000558474 DNAJB5O75953 348 aa13.65□□□□□ -0.22
VPS18-202ENST00000558474 EPPINO95925 133 aa13.65□□□□□ -0.22
VPS18-202ENST00000558474 CSTAP01040 98 aa13.65□□□□□ -0.22
VPS18-202ENST00000558474 NPIPA8P0DM63 369 aa13.65□□□□□ -0.22
VPS18-202ENST00000558474 WT1P19544 449 aaPredicted RBP13.65□□□□□ -0.22
VPS18-202ENST00000558474 IFNA8P32881 189 aa13.65□□□□□ -0.22
VPS18-202ENST00000558474 SOX3P41225 446 aa13.65□□□□□ -0.22
VPS18-202ENST00000558474 HLCSP50747 726 aa13.65□□□□□ -0.22
VPS18-202ENST00000558474 UCNP55089 124 aa13.65□□□□□ -0.22
VPS18-202ENST00000558474 VLDLRP98155 873 aa13.65□□□□□ -0.22
VPS18-202ENST00000558474 SLC34A1Q06495 639 aa13.65□□□□□ -0.22
VPS18-202ENST00000558474 SRSF6Q13247 344 aaKnown RBP13.65□□□□□ -0.22
VPS18-202ENST00000558474 GLIPR1L2Q4G1C9 344 aa13.65□□□□□ -0.22
VPS18-202ENST00000558474 IQCCQ4KMZ1 466 aa13.65□□□□□ -0.22
VPS18-202ENST00000558474 ABHD17BQ5VST6 288 aa13.65□□□□□ -0.22
VPS18-202ENST00000558474 C16orf47Q6ZP98 133 aaPredicted RBP13.65□□□□□ -0.22
VPS18-202ENST00000558474 RANBP3LQ86VV4 465 aaPredicted RBP13.65□□□□□ -0.22
VPS18-202ENST00000558474 CLIP4Q8N3C7 705 aa13.65□□□□□ -0.22
VPS18-202ENST00000558474 AMER2Q8N7J2 671 aa13.65□□□□□ -0.22
VPS18-202ENST00000558474 POGLUT1Q8NBL1 392 aa13.65□□□□□ -0.22
VPS18-202ENST00000558474 TOR1AIP2Q8NFQ8 470 aa13.65□□□□□ -0.22
VPS18-202ENST00000558474 OR10Q1Q8NGQ4 319 aa13.65□□□□□ -0.22
VPS18-202ENST00000558474 CENPNQ96H22 339 aaPredicted RBP13.65□□□□□ -0.22
VPS18-202ENST00000558474 NAF1Q96HR8 494 aaKnown RBP13.65□□□□□ -0.22
VPS18-202ENST00000558474 AMBRA1Q9C0C7 1298 aa13.65□□□□□ -0.22
VPS18-202ENST00000558474 RNF32Q9H0A6 362 aa13.65□□□□□ -0.22
VPS18-202ENST00000558474 ING2Q9H160 280 aa13.65□□□□□ -0.22
VPS18-202ENST00000558474 CPNE5Q9HCH3 593 aa13.65□□□□□ -0.22
VPS18-202ENST00000558474 SH2D2AQ9NP31 389 aa13.65□□□□□ -0.22
VPS18-202ENST00000558474 WDR70Q9NW82 654 aa13.65□□□□□ -0.22
VPS18-202ENST00000558474 HPF1Q9NWY4 346 aa13.65□□□□□ -0.22
VPS18-202ENST00000558474 STMN3Q9NZ72 180 aa13.65□□□□□ -0.22
VPS18-202ENST00000558474 CNIH4Q9P003 139 aa13.65□□□□□ -0.22
VPS18-202ENST00000558474 NDUFAF4Q9P032 175 aa13.65□□□□□ -0.22
VPS18-202ENST00000558474 DNAJB9Q9UBS3 223 aa13.65□□□□□ -0.22
VPS18-202ENST00000558474 TESQ9UGI8 421 aaKnown RBP13.65□□□□□ -0.22
VPS18-202ENST00000558474 ACAD8Q9UKU7 415 aa13.65□□□□□ -0.22
VPS18-202ENST00000558474 FAM32AQ9Y421 112 aaKnown RBP13.65□□□□□ -0.22
VPS18-202ENST00000558474 CENPVL1A0A0U1RR11 272 aa13.64□□□□□ -0.23
VPS18-202ENST00000558474 H0Y3Z8 333 aa13.64□□□□□ -0.23
VPS18-202ENST00000558474 FAAHO00519 579 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms