RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 KCTD19Q17RG1 926 aaPredicted RBP3.78□□□□□ -1.8
GPHN-215ENST00000557654 NADK2Q4G0N4 442 aa3.78□□□□□ -1.8
GPHN-215ENST00000557654 C1orf146Q5VVC0 180 aa3.78□□□□□ -1.8
GPHN-215ENST00000557654 TCEAL6Q6IPX3 200 aa3.78□□□□□ -1.8
GPHN-215ENST00000557654 PPP1R2P3Q6NXS1 205 aa3.78□□□□□ -1.8
GPHN-215ENST00000557654 RAPH1Q70E73 1250 aa3.78□□□□□ -1.8
GPHN-215ENST00000557654 TMEM110Q86TL2 294 aa3.78□□□□□ -1.8
GPHN-215ENST00000557654 ZNF410Q86VK4 478 aa3.78□□□□□ -1.8
GPHN-215ENST00000557654 C4orf33Q8N1A6 199 aa3.78□□□□□ -1.8
GPHN-215ENST00000557654 KLHL30-AS1Q8NEE0 82 aa3.78□□□□□ -1.8
GPHN-215ENST00000557654 RHOXF1Q8NHV9 184 aa3.78□□□□□ -1.8
GPHN-215ENST00000557654 TCP10LQ8TDR4 215 aa3.78□□□□□ -1.8
GPHN-215ENST00000557654 DQX1Q8TE96 717 aaKnown RBP3.78□□□□□ -1.8
GPHN-215ENST00000557654 C17orf50Q8WW18 174 aa3.78□□□□□ -1.8
GPHN-215ENST00000557654 CRYGNQ8WXF5 182 aa3.78□□□□□ -1.8
GPHN-215ENST00000557654 SHC3Q92529 594 aa3.78□□□□□ -1.8
GPHN-215ENST00000557654 C9orf72Q96LT7 481 aa3.78□□□□□ -1.8
GPHN-215ENST00000557654 TNFRSF13CQ96RJ3 184 aa3.78□□□□□ -1.8
GPHN-215ENST00000557654 FERMT1Q9BQL6 677 aa3.78□□□□□ -1.8
GPHN-215ENST00000557654 FRMD8P1Q9BZ68 369 aaPredicted RBP3.78□□□□□ -1.8
GPHN-215ENST00000557654 NMUR2Q9GZQ4 415 aa3.78□□□□□ -1.8
GPHN-215ENST00000557654 UBQLN3Q9H347 655 aa3.78□□□□□ -1.8
GPHN-215ENST00000557654 FAM96AQ9H5X1 160 aa3.78□□□□□ -1.8
GPHN-215ENST00000557654 MINDY3Q9H8M7 445 aa3.78□□□□□ -1.8
GPHN-215ENST00000557654 PLEKHA3Q9HB20 300 aa3.78□□□□□ -1.8
GPHN-215ENST00000557654 AGPAT3Q9NRZ7 376 aa3.78□□□□□ -1.8
GPHN-215ENST00000557654 RHBDL2Q9NX52 303 aa3.78□□□□□ -1.8
GPHN-215ENST00000557654 C6orf203Q9P0P8 240 aaPredicted RBP3.78□□□□□ -1.8
GPHN-215ENST00000557654 SUN2Q9UH99 717 aa3.78□□□□□ -1.8
GPHN-215ENST00000557654 ITGA11Q9UKX5 1188 aa3.78□□□□□ -1.8
GPHN-215ENST00000557654 NIP7Q9Y221 180 aaKnown RBP eCLIP3.78□□□□□ -1.8
GPHN-215ENST00000557654 FADS3Q9Y5Q0 445 aa3.78□□□□□ -1.8
GPHN-215ENST00000557654 AUP1Q9Y679 476 aa3.78□□□□□ -1.8
GPHN-215ENST00000557654 COL24A1Q17RW2 1714 aa3.78□□□□□ -1.8
GPHN-215ENST00000557654 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.78□□□□□ -1.8
GPHN-215ENST00000557654 NUP98P52948 1817 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 SF3B1O75533 1304 aaKnown RBP eCLIP3.77□□□□□ -1.814e-6■■■■■ 120.3
GPHN-215ENST00000557654 IQANK1A0A1B0GTG1 560 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 ARHGEF37A1IGU5 675 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 HTR3EA5X5Y0 456 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 C5orf52A6NGY3 159 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 SDR42E2A6NKP2 422 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 TRIM64CA6NLI5 447 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 TCP10L2B9ZVM9 353 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 TXNL1O43396 289 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 SELENOFO60613 162 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 DKC1O60832 514 aaKnown RBP eCLIP3.77□□□□□ -1.81
GPHN-215ENST00000557654 SPAG6O75602 509 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 SERPINB7O75635 380 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 ZNF189O75820 626 aaPredicted RBP3.77□□□□□ -1.81
GPHN-215ENST00000557654 PDE5AO76074 875 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 OR6B1O95007 311 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 KLHL2O95198 593 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 GOLGA8HP0CJ92 632 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 TIA1P31483 386 aaKnown RBP eCLIP3.77□□□□□ -1.816e-6■■□□□ 11.4
GPHN-215ENST00000557654 RFC4P35249 363 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 OR3A3P47888 321 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 RIDAP52758 137 aaKnown RBP3.77□□□□□ -1.81
GPHN-215ENST00000557654 MTTPP55157 894 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 BACE1P56817 501 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 NUP107P57740 925 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 GPX6P59796 221 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 NOP14P78316 857 aaKnown RBP3.77□□□□□ -1.81
GPHN-215ENST00000557654 GSTO1P78417 241 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 FOLH1Q04609 750 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 PPIDQ08752 370 aaKnown RBP3.77□□□□□ -1.81
GPHN-215ENST00000557654 OVGP1Q12889 678 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 BFSP1Q12934 665 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 PPA1Q15181 289 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 CLPPQ16740 277 aaPredicted RBP3.77□□□□□ -1.81
GPHN-215ENST00000557654 TMEM44Q2T9K0 475 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 RABGAP1LQ5R372 815 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 LRRC38Q5VT99 294 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 RWDD4Q6NW29 188 aaKnown RBP3.77□□□□□ -1.81
GPHN-215ENST00000557654 SLC27A4Q6P1M0 643 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 C1orf186Q6ZWK4 172 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 ZNF720Q7Z2F6 126 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 SPATA19Q7Z5L4 167 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 MEX3DQ86XN8 651 aaKnown RBP3.77□□□□□ -1.81
GPHN-215ENST00000557654 ZNF677Q86XU0 584 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 ICA1LQ8NDH6 482 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 SAP25Q8TEE9 199 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 PYROXD1Q8WU10 500 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 DCAKDQ8WVC6 231 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 SNRNP27Q8WVK2 155 aaKnown RBP3.77□□□□□ -1.81
GPHN-215ENST00000557654 SGF29Q96ES7 293 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 DYNLL2Q96FJ2 89 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 TSPAN18Q96SJ8 248 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 CGREF1Q99674 301 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 CCT7Q99832 543 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 DHX33Q9H6R0 707 aaKnown RBP3.77□□□□□ -1.81
GPHN-215ENST00000557654 VPS37BQ9H9H4 285 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 TMEM165Q9HC07 324 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 TUFT1Q9NNX1 390 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 PALMDQ9NP74 551 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 PFDN4Q9NQP4 134 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 FBXO6Q9NRD1 293 aaPredicted RBP3.77□□□□□ -1.81
GPHN-215ENST00000557654 INIPQ9NRY2 104 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 DEPPQ9NTK1 212 aa3.77□□□□□ -1.81
GPHN-215ENST00000557654 DNAJC17Q9NVM6 304 aaKnown RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms