RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 CBFA2T3O75081 653 aa11.53□□□□□ -0.56
SHMT2-233ENST00000557529 RFPL3O75679 317 aa11.53□□□□□ -0.56
SHMT2-233ENST00000557529 SMNDC1O75940 238 aaKnown RBP eCLIP11.53□□□□□ -0.566e-6■□□□□ 8.8
SHMT2-233ENST00000557529 CCL4P13236 92 aa11.53□□□□□ -0.56
SHMT2-233ENST00000557529 GSTM3P21266 225 aa11.53□□□□□ -0.56
SHMT2-233ENST00000557529 FUT4P22083 530 aa11.53□□□□□ -0.56
SHMT2-233ENST00000557529 SLC5A2P31639 672 aa11.53□□□□□ -0.56
SHMT2-233ENST00000557529 GGT2P36268 569 aa11.53□□□□□ -0.56
SHMT2-233ENST00000557529 RAB15P59190 212 aa11.53□□□□□ -0.56
SHMT2-233ENST00000557529 FOXD4Q12950 439 aaPredicted RBP11.53□□□□□ -0.56
SHMT2-233ENST00000557529 RAPSNQ13702 412 aa11.53□□□□□ -0.56
SHMT2-233ENST00000557529 FGFBP1Q14512 234 aa11.53□□□□□ -0.56
SHMT2-233ENST00000557529 EBPQ15125 230 aaKnown RBP11.53□□□□□ -0.56
SHMT2-233ENST00000557529 C6orf141Q5SZD1 244 aa11.53□□□□□ -0.56
SHMT2-233ENST00000557529 ISLR2Q6UXK2 745 aa11.53□□□□□ -0.56
SHMT2-233ENST00000557529 CD300LDQ6UXZ3 194 aa11.53□□□□□ -0.56
SHMT2-233ENST00000557529 ZNF730Q6ZMV8 503 aa11.53□□□□□ -0.56
SHMT2-233ENST00000557529 SHISA6Q6ZSJ9 500 aa11.53□□□□□ -0.56
SHMT2-233ENST00000557529 LANCL3Q6ZV70 420 aa11.53□□□□□ -0.56
SHMT2-233ENST00000557529 RRM2BQ7LG56 351 aa11.53□□□□□ -0.56
SHMT2-233ENST00000557529 ZNF550Q7Z398 422 aa11.53□□□□□ -0.56
SHMT2-233ENST00000557529 ZNF614Q8N883 585 aa11.53□□□□□ -0.56
SHMT2-233ENST00000557529 ZNF527Q8NB42 609 aa11.53□□□□□ -0.56
SHMT2-233ENST00000557529 ZSCAN1Q8NBB4 408 aa11.53□□□□□ -0.56
SHMT2-233ENST00000557529 ADAMTS16Q8TE57 1224 aa11.53□□□□□ -0.56
SHMT2-233ENST00000557529 ACOT11Q8WXI4 607 aaPredicted RBP11.53□□□□□ -0.56
SHMT2-233ENST00000557529 RNF31Q96EP0 1072 aa11.53□□□□□ -0.56
SHMT2-233ENST00000557529 HSPBAP1Q96EW2 488 aa11.53□□□□□ -0.56
SHMT2-233ENST00000557529 GAL3ST4Q96RP7 486 aa11.53□□□□□ -0.56
SHMT2-233ENST00000557529 WWTR1Q9GZV5 400 aa11.53□□□□□ -0.56
SHMT2-233ENST00000557529 NXF5Q9H1B4 397 aaKnown RBP11.53□□□□□ -0.56
SHMT2-233ENST00000557529 KRCC1Q9NPI7 259 aaPredicted RBP11.53□□□□□ -0.56
SHMT2-233ENST00000557529 CTPS2Q9NRF8 586 aa11.53□□□□□ -0.56
SHMT2-233ENST00000557529 SEMA4GQ9NTN9 838 aa11.53□□□□□ -0.56
SHMT2-233ENST00000557529 PPIEQ9UNP9 301 aaKnown RBP11.53□□□□□ -0.56
SHMT2-233ENST00000557529 NINQ8N4C6 2090 aa11.52□□□□□ -0.57
SHMT2-233ENST00000557529 ASCC3Q8N3C0 2202 aaKnown RBP11.52□□□□□ -0.57
SHMT2-233ENST00000557529 GPR179Q6PRD1 2367 aa11.52□□□□□ -0.57
SHMT2-233ENST00000557529 SERINC4A6NH21 518 aa11.52□□□□□ -0.57
SHMT2-233ENST00000557529 SAGE2PA6NJ88 616 aa11.52□□□□□ -0.57
SHMT2-233ENST00000557529 C9J4A7 227 aa11.52□□□□□ -0.57
SHMT2-233ENST00000557529 TNFRSF10AO00220 468 aa11.52□□□□□ -0.57
SHMT2-233ENST00000557529 LRP3O75074 770 aa11.52□□□□□ -0.57
SHMT2-233ENST00000557529 OSMP13725 252 aa11.52□□□□□ -0.57
SHMT2-233ENST00000557529 POU2F1P14859 743 aa11.52□□□□□ -0.57
SHMT2-233ENST00000557529 EPHA2P29317 976 aa11.52□□□□□ -0.57
SHMT2-233ENST00000557529 KRT20P35900 424 aa11.52□□□□□ -0.57
SHMT2-233ENST00000557529 RPL5P46777 297 aaKnown RBP11.52□□□□□ -0.57
SHMT2-233ENST00000557529 CRISP1P54107 249 aa11.52□□□□□ -0.57
SHMT2-233ENST00000557529 HOXC5Q00444 222 aa11.52□□□□□ -0.57
SHMT2-233ENST00000557529 ALDH6A1Q02252 535 aaKnown RBP11.52□□□□□ -0.57
SHMT2-233ENST00000557529 TARDBPQ13148 414 aaKnown RBP eCLIP11.52□□□□□ -0.57
SHMT2-233ENST00000557529 FAAH2Q6GMR7 532 aa11.52□□□□□ -0.57
SHMT2-233ENST00000557529 MRPL14Q6P1L8 145 aaKnown RBP11.52□□□□□ -0.57
SHMT2-233ENST00000557529 C1orf94Q6P1W5 598 aa11.52□□□□□ -0.57
SHMT2-233ENST00000557529 ZNF613Q6PF04 617 aa11.52□□□□□ -0.57
SHMT2-233ENST00000557529 KLHL17Q6TDP4 642 aa11.52□□□□□ -0.57
SHMT2-233ENST00000557529 GDF7Q7Z4P5 450 aa11.52□□□□□ -0.57
SHMT2-233ENST00000557529 C9orf40Q8IXQ3 194 aa11.52□□□□□ -0.57
SHMT2-233ENST00000557529 ZNF440Q8IYI8 595 aa11.52□□□□□ -0.57
SHMT2-233ENST00000557529 DEPDC4Q8N2C3 294 aa11.52□□□□□ -0.57
SHMT2-233ENST00000557529 B3GNT7Q8NFL0 401 aa11.52□□□□□ -0.57
SHMT2-233ENST00000557529 PIGXQ8TBF5 258 aa11.52□□□□□ -0.57
SHMT2-233ENST00000557529 GNPDA2Q8TDQ7 276 aa11.52□□□□□ -0.57
SHMT2-233ENST00000557529 CNOT9Q92600 299 aaKnown RBP11.52□□□□□ -0.57
SHMT2-233ENST00000557529 SPSB2Q99619 263 aa11.52□□□□□ -0.57
SHMT2-233ENST00000557529 ZPBPQ9BS86 351 aa11.52□□□□□ -0.57
SHMT2-233ENST00000557529 CRB3Q9BUF7 120 aa11.52□□□□□ -0.57
SHMT2-233ENST00000557529 PRR14Q9BWN1 585 aa11.52□□□□□ -0.57
SHMT2-233ENST00000557529 ULBP3Q9BZM4 244 aa11.52□□□□□ -0.57
SHMT2-233ENST00000557529 TRIM2Q9C040 744 aa11.52□□□□□ -0.57
SHMT2-233ENST00000557529 ADNPQ9H2P0 1102 aa11.52□□□□□ -0.57
SHMT2-233ENST00000557529 TMEM27Q9HBJ8 222 aa11.52□□□□□ -0.57
SHMT2-233ENST00000557529 UBQLN4Q9NRR5 601 aa11.52□□□□□ -0.57
SHMT2-233ENST00000557529 DNAJB12Q9NXW2 375 aaKnown RBP11.52□□□□□ -0.57
SHMT2-233ENST00000557529 SLC35A3Q9Y2D2 325 aa11.52□□□□□ -0.57
SHMT2-233ENST00000557529 LOXL2Q9Y4K0 774 aa11.52□□□□□ -0.57
SHMT2-233ENST00000557529 FER1L5A0AVI2 2057 aa11.52□□□□□ -0.57
SHMT2-233ENST00000557529 A0A087WUU8 490 aa11.51□□□□□ -0.57
SHMT2-233ENST00000557529 CD63P08962 238 aa11.51□□□□□ -0.57
SHMT2-233ENST00000557529 CCDC159P0C7I6 412 aa11.51□□□□□ -0.57
SHMT2-233ENST00000557529 GKN3PP0CG01 181 aa11.51□□□□□ -0.57
SHMT2-233ENST00000557529 PRG2P13727 222 aa11.51□□□□□ -0.57
SHMT2-233ENST00000557529 ATP6V1B1P15313 513 aa11.51□□□□□ -0.57
SHMT2-233ENST00000557529 HPGDP15428 266 aa11.51□□□□□ -0.57
SHMT2-233ENST00000557529 HTR2AP28223 471 aa11.51□□□□□ -0.57
SHMT2-233ENST00000557529 ELK4P28324 431 aa11.51□□□□□ -0.57
SHMT2-233ENST00000557529 ADH7P40394 386 aa11.51□□□□□ -0.57
SHMT2-233ENST00000557529 HLCSP50747 726 aa11.51□□□□□ -0.57
SHMT2-233ENST00000557529 GPR143P51810 404 aa11.51□□□□□ -0.57
SHMT2-233ENST00000557529 NR1H2P55055 460 aa11.51□□□□□ -0.57
SHMT2-233ENST00000557529 GABARAPL2P60520 117 aa11.51□□□□□ -0.57
SHMT2-233ENST00000557529 CXCR4P61073 352 aa11.51□□□□□ -0.57
SHMT2-233ENST00000557529 CSNK2BP67870 215 aa11.51□□□□□ -0.57
SHMT2-233ENST00000557529 SPEM2Q0P670 501 aa11.51□□□□□ -0.57
SHMT2-233ENST00000557529 CDK5R2Q13319 367 aa11.51□□□□□ -0.57
SHMT2-233ENST00000557529 MAD2L1BPQ15013 274 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-233ENST00000557529 OR1Q1Q15612 314 aa11.51□□□□□ -0.57
SHMT2-233ENST00000557529 CSRP2Q16527 193 aa11.51□□□□□ -0.57
SHMT2-233ENST00000557529 MEP1AQ16819 746 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms