RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 GIMAP5Q96F15 307 aa7□□□□□ -1.29
PTCSC3-201ENST00000556013 ADGRG7Q96K78 797 aa7□□□□□ -1.29
PTCSC3-201ENST00000556013 FAM111AQ96PZ2 611 aa7□□□□□ -1.29
PTCSC3-201ENST00000556013 MED18Q9BUE0 208 aa7□□□□□ -1.29
PTCSC3-201ENST00000556013 HDHD5Q9BXW7 423 aa7□□□□□ -1.29
PTCSC3-201ENST00000556013 RTN4RQ9BZR6 473 aa7□□□□□ -1.29
PTCSC3-201ENST00000556013 EML4Q9HC35 981 aaKnown RBP7□□□□□ -1.29
PTCSC3-201ENST00000556013 DUSP22Q9NRW4 184 aa7□□□□□ -1.29
PTCSC3-201ENST00000556013 MKS1Q9NXB0 559 aa7□□□□□ -1.29
PTCSC3-201ENST00000556013 SH3BP4Q9P0V3 963 aa7□□□□□ -1.29
PTCSC3-201ENST00000556013 ATP6V1HQ9UI12 483 aa7□□□□□ -1.29
PTCSC3-201ENST00000556013 MCTS1Q9ULC4 181 aaKnown RBP7□□□□□ -1.29
PTCSC3-201ENST00000556013 GPR52Q9Y2T5 361 aa7□□□□□ -1.29
PTCSC3-201ENST00000556013 EMC9Q9Y3B6 208 aa7□□□□□ -1.29
PTCSC3-201ENST00000556013 DNAJC15Q9Y5T4 150 aa7□□□□□ -1.29
PTCSC3-201ENST00000556013 ABCA2Q9BZC7 2435 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 MAP1AP78559 2803 aaPredicted RBP6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 A0A1W2PPR1 153 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 LSM1O15116 133 aaKnown RBP6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 SS18L1O75177 396 aaPredicted RBP6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 SMNDC1O75940 238 aaKnown RBP eCLIP6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 KCNK2O95069 426 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 OXSR1O95747 527 aaPredicted RBP6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 KRT16P08779 473 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 INHBBP09529 407 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 ALOX5P09917 674 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 HPGDP15428 266 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 PAX1P15863 534 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 KRT4P19013 534 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 PSMA4P25789 261 aaKnown RBP6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 MAPK1P28482 360 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 NR1H2P55055 460 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 CLDN20P56880 219 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 GRAMD1BQ3KR37 738 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 LSM12Q3MHD2 195 aaKnown RBP6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 UGT3A2Q3SY77 523 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 RFTN2Q52LD8 501 aaPredicted RBP6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 BEX5Q5H9J7 111 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 AP1ARQ63HQ0 302 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 KANK2Q63ZY3 851 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 SSX8Q7RTT4 187 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 ZNF551Q7Z340 670 aaPredicted RBP6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 GGNQ86UU5 652 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 TRABD2AQ86V40 505 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 C10orf107Q8IVU9 208 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 UBQLNLQ8IYU4 475 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 ZNF610Q8N9Z0 462 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 CCDC63Q8NA47 563 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 SLC16A11Q8NCK7 471 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 WFDC11Q8NEX6 87 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 OR4C3Q8NH37 302 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 CDC26Q8NHZ8 85 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 FNDC9Q8TBE3 224 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 OIT3Q8WWZ8 545 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 MOAP1Q96BY2 351 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 MARK4Q96L34 752 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 PPP3R2Q96LZ3 170 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 MS4A4EQ96PG1 132 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 PRPF18Q99633 342 aaKnown RBP6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 RHOXF2Q9BQY4 288 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 BDH2Q9BUT1 245 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 GATA5Q9BWX5 397 aaPredicted RBP6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 BTBD2Q9BX70 525 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 PRRG4Q9BZD6 226 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 ROPN1BQ9BZX4 212 aaPredicted RBP6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 PIGUQ9H490 435 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 TUBB1Q9H4B7 451 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 ROPN1Q9HAT0 212 aaPredicted RBP6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 TIGARQ9NQ88 270 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 TRAF6Q9Y4K3 522 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 ACTL7BQ9Y614 415 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 PCNX3Q9H6A9 2034 aa6.99□□□□□ -1.29
PTCSC3-201ENST00000556013 NIPBLQ6KC79 2804 aaeCLIP6.98□□□□□ -1.29
PTCSC3-201ENST00000556013 A0A1W2PRB8 838 aa6.98□□□□□ -1.29
PTCSC3-201ENST00000556013 GXYLT2A0PJZ3 443 aa6.98□□□□□ -1.29
PTCSC3-201ENST00000556013 GJE1A6NN92 205 aa6.98□□□□□ -1.29
PTCSC3-201ENST00000556013 H0YC42 278 aa6.98□□□□□ -1.29
PTCSC3-201ENST00000556013 H3BML4 177 aa6.98□□□□□ -1.29
PTCSC3-201ENST00000556013 SCDO00767 359 aa6.98□□□□□ -1.29
PTCSC3-201ENST00000556013 SEC14L5O43304 696 aa6.98□□□□□ -1.29
PTCSC3-201ENST00000556013 SMPD2O60906 423 aa6.98□□□□□ -1.29
PTCSC3-201ENST00000556013 SYNGR4O95473 234 aa6.98□□□□□ -1.29
PTCSC3-201ENST00000556013 IGKV1D-16P01601 117 aa6.98□□□□□ -1.29
PTCSC3-201ENST00000556013 BCKDHAP12694 445 aa6.98□□□□□ -1.29
PTCSC3-201ENST00000556013 SDC1P18827 310 aa6.98□□□□□ -1.29
PTCSC3-201ENST00000556013 PSMB1P20618 241 aaKnown RBP6.98□□□□□ -1.29
PTCSC3-201ENST00000556013 ME2P23368 584 aa6.98□□□□□ -1.29
PTCSC3-201ENST00000556013 ELK4P28324 431 aa6.98□□□□□ -1.29
PTCSC3-201ENST00000556013 CPOXP36551 454 aa6.98□□□□□ -1.29
PTCSC3-201ENST00000556013 EIF1AXP47813 144 aaKnown RBP6.98□□□□□ -1.29
PTCSC3-201ENST00000556013 KCNJ5P48544 419 aa6.98□□□□□ -1.29
PTCSC3-201ENST00000556013 PRKAG1P54619 331 aa6.98□□□□□ -1.29
PTCSC3-201ENST00000556013 TPD52P55327 224 aaPredicted RBP6.98□□□□□ -1.29
PTCSC3-201ENST00000556013 SUMO3P55854 103 aaPredicted RBP6.98□□□□□ -1.29
PTCSC3-201ENST00000556013 CTBP2P56545 445 aa6.98□□□□□ -1.29
PTCSC3-201ENST00000556013 POU6F2P78424 691 aaPredicted RBP6.98□□□□□ -1.29
PTCSC3-201ENST00000556013 HSPB3Q12988 150 aa6.98□□□□□ -1.29
PTCSC3-201ENST00000556013 SMU1Q2TAY7 513 aa6.98□□□□□ -1.29
PTCSC3-201ENST00000556013 CLEC6AQ6EIG7 209 aa6.98□□□□□ -1.29
PTCSC3-201ENST00000556013 MFSD12Q6NUT3 480 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms