RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 ALG1L2C9J202 215 aa16.64■□□□□ 0.25
NEDD1-208ENST00000555806 H3BML4 177 aa16.64■□□□□ 0.25
NEDD1-208ENST00000555806 SEC14L5O43304 696 aa16.64■□□□□ 0.25
NEDD1-208ENST00000555806 RCBTB2O95199 551 aa16.64■□□□□ 0.25
NEDD1-208ENST00000555806 NGFRP08138 427 aa16.64■□□□□ 0.25
NEDD1-208ENST00000555806 KRT16P08779 473 aa16.64■□□□□ 0.25
NEDD1-208ENST00000555806 TBXA2RP21731 343 aa16.64■□□□□ 0.25
NEDD1-208ENST00000555806 CLDN8P56748 225 aa16.64■□□□□ 0.25
NEDD1-208ENST00000555806 FOXF2Q12947 444 aa16.64■□□□□ 0.25
NEDD1-208ENST00000555806 SMU1Q2TAY7 513 aa16.64■□□□□ 0.25
NEDD1-208ENST00000555806 FBXL19-AS1Q494R0 122 aa16.64■□□□□ 0.25
NEDD1-208ENST00000555806 CDC73Q6P1J9 531 aa16.64■□□□□ 0.25
NEDD1-208ENST00000555806 ADGRE4PQ86SQ3 457 aa16.64■□□□□ 0.25
NEDD1-208ENST00000555806 CDH24Q86UP0 819 aa16.64■□□□□ 0.25
NEDD1-208ENST00000555806 GCNT2Q8N0V5 402 aa16.64■□□□□ 0.25
NEDD1-208ENST00000555806 OR4C3Q8NH37 302 aa16.64■□□□□ 0.25
NEDD1-208ENST00000555806 GOT1L1Q8NHS2 421 aaPredicted RBP16.64■□□□□ 0.25
NEDD1-208ENST00000555806 PSMA8Q8TAA3 256 aa16.64■□□□□ 0.25
NEDD1-208ENST00000555806 SFXN5Q8TD22 340 aa16.64■□□□□ 0.25
NEDD1-208ENST00000555806 ADAMTS15Q8TE58 950 aa16.64■□□□□ 0.25
NEDD1-208ENST00000555806 UCN2Q96RP3 112 aa16.64■□□□□ 0.25
NEDD1-208ENST00000555806 SFXN3Q9BWM7 321 aa16.64■□□□□ 0.25
NEDD1-208ENST00000555806 ACTRT3Q9BYD9 372 aa16.64■□□□□ 0.25
NEDD1-208ENST00000555806 ACBD3Q9H3P7 528 aa16.64■□□□□ 0.25
NEDD1-208ENST00000555806 HHATLQ9HCP6 504 aa16.64■□□□□ 0.25
NEDD1-208ENST00000555806 DUSP22Q9NRW4 184 aa16.64■□□□□ 0.25
NEDD1-208ENST00000555806 FBXO34Q9NWN3 711 aa16.64■□□□□ 0.25
NEDD1-208ENST00000555806 ASIC5Q9NY37 505 aa16.64■□□□□ 0.25
NEDD1-208ENST00000555806 FOXD3Q9UJU5 478 aaPredicted RBP16.64■□□□□ 0.25
NEDD1-208ENST00000555806 VDAC3Q9Y277 283 aa16.64■□□□□ 0.25
NEDD1-208ENST00000555806 ZNF337Q9Y3M9 751 aa16.64■□□□□ 0.25
NEDD1-208ENST00000555806 PDZD2O15018 2839 aa16.64■□□□□ 0.25
NEDD1-208ENST00000555806 LINC01387J3KSC0 135 aa16.63■□□□□ 0.25
NEDD1-208ENST00000555806 SCDO00767 359 aa16.63■□□□□ 0.25
NEDD1-208ENST00000555806 HCRTR2O43614 444 aa16.63■□□□□ 0.25
NEDD1-208ENST00000555806 ERLIN1O75477 346 aa16.63■□□□□ 0.25
NEDD1-208ENST00000555806 ATP6V1C1P21283 382 aa16.63■□□□□ 0.25
NEDD1-208ENST00000555806 LCN1P31025 176 aa16.63■□□□□ 0.25
NEDD1-208ENST00000555806 EEFSECP57772 596 aaKnown RBP16.63■□□□□ 0.25
NEDD1-208ENST00000555806 GLYR1Q49A26 553 aaPredicted RBP16.63■□□□□ 0.25
NEDD1-208ENST00000555806 EXOSC6Q5RKV6 272 aaKnown RBP16.63■□□□□ 0.25
NEDD1-208ENST00000555806 OR5AK3PQ8NH89 298 aa16.63■□□□□ 0.25
NEDD1-208ENST00000555806 MGARPQ8TDB4 240 aa16.63■□□□□ 0.25
NEDD1-208ENST00000555806 MOAP1Q96BY2 351 aa16.63■□□□□ 0.25
NEDD1-208ENST00000555806 NUF2Q9BZD4 464 aa16.63■□□□□ 0.25
NEDD1-208ENST00000555806 DPY30Q9C005 99 aa16.63■□□□□ 0.25
NEDD1-208ENST00000555806 PIGUQ9H490 435 aa16.63■□□□□ 0.25
NEDD1-208ENST00000555806 UBQLN4Q9NRR5 601 aa16.63■□□□□ 0.25
NEDD1-208ENST00000555806 CRIM1Q9NZV1 1036 aa16.63■□□□□ 0.25
NEDD1-208ENST00000555806 SLC22A20A6NK97 555 aa16.62■□□□□ 0.25
NEDD1-208ENST00000555806 SHISA8B8ZZ34 492 aa16.62■□□□□ 0.25
NEDD1-208ENST00000555806 TGM6O95932 706 aa16.62■□□□□ 0.25
NEDD1-208ENST00000555806 CPA2P48052 419 aa16.62■□□□□ 0.25
NEDD1-208ENST00000555806 C21orf58P58505 322 aa16.62■□□□□ 0.25
NEDD1-208ENST00000555806 HBA1P69905 142 aa16.62■□□□□ 0.25
NEDD1-208ENST00000555806 BST1Q10588 318 aa16.62■□□□□ 0.25
NEDD1-208ENST00000555806 OR4F3Q6IEY1 312 aa16.62■□□□□ 0.25
NEDD1-208ENST00000555806 CAMKMTQ7Z624 323 aa16.62■□□□□ 0.25
NEDD1-208ENST00000555806 KIF18BQ86Y91 864 aa16.62■□□□□ 0.25
NEDD1-208ENST00000555806 SH3YL1Q96HL8 342 aaPredicted RBP16.62■□□□□ 0.25
NEDD1-208ENST00000555806 PNPOQ9NVS9 261 aa16.62■□□□□ 0.25
NEDD1-208ENST00000555806 GPATCH2Q9NW75 528 aa16.62■□□□□ 0.25
NEDD1-208ENST00000555806 GIN1Q9NXP7 522 aa16.62■□□□□ 0.25
NEDD1-208ENST00000555806 TACC2O95359 2948 aa16.62■□□□□ 0.25
NEDD1-208ENST00000555806 POLQO75417 2590 aa16.61■□□□□ 0.25
NEDD1-208ENST00000555806 TMEM120BA0PK00 339 aa16.61■□□□□ 0.25
NEDD1-208ENST00000555806 H0YC42 278 aa16.61■□□□□ 0.25
NEDD1-208ENST00000555806 ZNF41P51814 821 aaPredicted RBP16.61■□□□□ 0.25
NEDD1-208ENST00000555806 SUCLG1P53597 346 aaKnown RBP16.61■□□□□ 0.25
NEDD1-208ENST00000555806 TPD52P55327 224 aaPredicted RBP16.61■□□□□ 0.25
NEDD1-208ENST00000555806 CLDN20P56880 219 aa16.61■□□□□ 0.25
NEDD1-208ENST00000555806 FLYWCH1Q4VC44 716 aa16.61■□□□□ 0.25
NEDD1-208ENST00000555806 DCST2Q5T1A1 773 aa16.61■□□□□ 0.25
NEDD1-208ENST00000555806 BHLHB9Q6PI77 547 aa16.61■□□□□ 0.25
NEDD1-208ENST00000555806 LUZP2Q86TE4 346 aa16.61■□□□□ 0.25
NEDD1-208ENST00000555806 MISPQ8IVT2 679 aa16.61■□□□□ 0.25
NEDD1-208ENST00000555806 CLECL1Q8IZS7 167 aa16.61■□□□□ 0.25
NEDD1-208ENST00000555806 RBM24Q9BX46 236 aaKnown RBP16.61■□□□□ 0.25
NEDD1-208ENST00000555806 PINK1Q9BXM7 581 aa16.61■□□□□ 0.25
NEDD1-208ENST00000555806 JKAMPQ9P055 326 aa16.61■□□□□ 0.25
NEDD1-208ENST00000555806 HAO1Q9UJM8 370 aa16.61■□□□□ 0.25
NEDD1-208ENST00000555806 AP4B1Q9Y6B7 739 aa16.61■□□□□ 0.25
NEDD1-208ENST00000555806 CSMD2Q7Z408 3487 aa16.61■□□□□ 0.25
NEDD1-208ENST00000555806 A0A087WZY1 265 aa16.6■□□□□ 0.25
NEDD1-208ENST00000555806 NPIPA5A0A0B4J1W7 369 aa16.6■□□□□ 0.25
NEDD1-208ENST00000555806 NPIPA7E9PJI5 369 aa16.6■□□□□ 0.25
NEDD1-208ENST00000555806 NPIPA8P0DM63 369 aa16.6■□□□□ 0.25
NEDD1-208ENST00000555806 LBPP18428 481 aa16.6■□□□□ 0.25
NEDD1-208ENST00000555806 CLDN15P56746 228 aa16.6■□□□□ 0.25
NEDD1-208ENST00000555806 RPS3AP61247 264 aaKnown RBP16.6■□□□□ 0.25
NEDD1-208ENST00000555806 OR2A2Q6IF42 318 aa16.6■□□□□ 0.25
NEDD1-208ENST00000555806 ZNF527Q8NB42 609 aa16.6■□□□□ 0.25
NEDD1-208ENST00000555806 OR4A15Q8NGL6 344 aa16.6■□□□□ 0.25
NEDD1-208ENST00000555806 PHOSPHO1Q8TCT1 267 aa16.6■□□□□ 0.25
NEDD1-208ENST00000555806 FIG4Q92562 907 aa16.6■□□□□ 0.25
NEDD1-208ENST00000555806 OR7D2Q96RA2 312 aa16.6■□□□□ 0.25
NEDD1-208ENST00000555806 MEAF6Q9HAF1 191 aa16.6■□□□□ 0.25
NEDD1-208ENST00000555806 DNAJB12Q9NXW2 375 aaKnown RBP16.6■□□□□ 0.25
NEDD1-208ENST00000555806 STOML1Q9UBI4 398 aa16.6■□□□□ 0.25
NEDD1-208ENST00000555806 PCDHGB4Q9UN71 923 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms