RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 MASP1P48740 699 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 HLCSP50747 726 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 CCL11P51671 97 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 CCR4P51679 360 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 SOX8P57073 446 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 FBXW4P57775 412 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 COPZ1P61923 177 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 TLE3Q04726 772 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 Q0VFX4 171 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 SRSF6Q13247 344 aaKnown RBP10.3□□□□□ -0.76
SHMT2-220ENST00000555634 MFAP5Q13361 173 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 SNTA1Q13424 505 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 ZNF141Q15928 474 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 GRAMD1BQ3KR37 738 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 DHRS4L2Q6PKH6 230 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 IL20RBQ6UXL0 311 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 ZNF550Q7Z398 422 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 BEST3Q8N1M1 668 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 SMYD1Q8NB12 490 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 PHOSPHO1Q8TCT1 267 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 SLC35B4Q969S0 331 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 TAMM41Q96BW9 452 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 SDCCAG3Q96C92 435 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 PYURFQ96I23 114 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 SEPHS2Q99611 448 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 DENND2DQ9H6A0 471 aaPredicted RBP10.3□□□□□ -0.76
SHMT2-220ENST00000555634 SACM1LQ9NTJ5 587 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 PPP4R1LQ9P1A2 415 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 RPS6KB2Q9UBS0 482 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 B4GALT7Q9UBV7 327 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 TESQ9UGI8 421 aaKnown RBP10.3□□□□□ -0.76
SHMT2-220ENST00000555634 RAXQ9Y2V3 346 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 ATRXP46100 2492 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 NPIPA5A0A0B4J1W7 369 aa10.29□□□□□ -0.76
SHMT2-220ENST00000555634 TCRBV3S1A0A5B6 114 aa10.29□□□□□ -0.76
SHMT2-220ENST00000555634 SERINC4A6NH21 518 aa10.29□□□□□ -0.76
SHMT2-220ENST00000555634 NPIPA7E9PJI5 369 aa10.29□□□□□ -0.76
SHMT2-220ENST00000555634 GNGT2O14610 69 aa10.29□□□□□ -0.76
SHMT2-220ENST00000555634 ZNF264O43296 627 aa10.29□□□□□ -0.76
SHMT2-220ENST00000555634 HNRNPRO43390 633 aaKnown RBP10.29□□□□□ -0.76
SHMT2-220ENST00000555634 UGT2B11O75310 529 aa10.29□□□□□ -0.76
SHMT2-220ENST00000555634 UGT2B17O75795 530 aa10.29□□□□□ -0.76
SHMT2-220ENST00000555634 CYP7B1O75881 506 aa10.29□□□□□ -0.76
SHMT2-220ENST00000555634 PRKD3O94806 890 aa10.29□□□□□ -0.76
SHMT2-220ENST00000555634 MFN2O95140 757 aa10.29□□□□□ -0.76
SHMT2-220ENST00000555634 NADKO95544 446 aaPredicted RBP10.29□□□□□ -0.76
SHMT2-220ENST00000555634 NUDT14O95848 222 aa10.29□□□□□ -0.76
SHMT2-220ENST00000555634 FESP07332 822 aa10.29□□□□□ -0.76
SHMT2-220ENST00000555634 NPIPA8P0DM63 369 aa10.29□□□□□ -0.76
SHMT2-220ENST00000555634 CD46P15529 392 aa10.29□□□□□ -0.76
SHMT2-220ENST00000555634 SUMO3P55854 103 aaPredicted RBP10.29□□□□□ -0.76
SHMT2-220ENST00000555634 KCNJ10P78508 379 aa10.29□□□□□ -0.76
SHMT2-220ENST00000555634 MS4A2Q01362 244 aa10.29□□□□□ -0.76
SHMT2-220ENST00000555634 DMTNQ08495 405 aa10.29□□□□□ -0.76
SHMT2-220ENST00000555634 FGFBP1Q14512 234 aa10.29□□□□□ -0.76
SHMT2-220ENST00000555634 MRPL2Q5T653 305 aaKnown RBP10.29□□□□□ -0.76
SHMT2-220ENST00000555634 SLC22A10Q63ZE4 541 aa10.29□□□□□ -0.76
SHMT2-220ENST00000555634 SLC30A6Q6NXT4 461 aa10.29□□□□□ -0.76
SHMT2-220ENST00000555634 AAGABQ6PD74 315 aa10.29□□□□□ -0.76
SHMT2-220ENST00000555634 ZNF836Q6ZNA1 936 aa10.29□□□□□ -0.76
SHMT2-220ENST00000555634 LINC00696Q6ZRV3 163 aa10.29□□□□□ -0.76
SHMT2-220ENST00000555634 PACS2Q86VP3 889 aa10.29□□□□□ -0.76
SHMT2-220ENST00000555634 TMEM178AQ8NBL3 297 aa10.29□□□□□ -0.76
SHMT2-220ENST00000555634 FAM98AQ8NCA5 519 aaKnown RBP10.29□□□□□ -0.76
SHMT2-220ENST00000555634 TOR1AIP2Q8NFQ8 470 aa10.29□□□□□ -0.76
SHMT2-220ENST00000555634 VANGL1Q8TAA9 524 aaPredicted RBP10.29□□□□□ -0.76
SHMT2-220ENST00000555634 ZNF597Q96LX8 424 aa10.29□□□□□ -0.76
SHMT2-220ENST00000555634 LMF1Q96S06 567 aa10.29□□□□□ -0.76
SHMT2-220ENST00000555634 ZNF347Q96SE7 839 aa10.29□□□□□ -0.76
SHMT2-220ENST00000555634 ARHGAP9Q9BRR9 750 aa10.29□□□□□ -0.76
SHMT2-220ENST00000555634 POLR2J2Q9GZM3 115 aaKnown RBP10.29□□□□□ -0.76
SHMT2-220ENST00000555634 RNF32Q9H0A6 362 aa10.29□□□□□ -0.76
SHMT2-220ENST00000555634 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.29□□□□□ -0.76
SHMT2-220ENST00000555634 QRSL1Q9H0R6 528 aaKnown RBP10.29□□□□□ -0.76
SHMT2-220ENST00000555634 POLR2J3Q9H1A7 115 aaKnown RBP10.29□□□□□ -0.76
SHMT2-220ENST00000555634 PTGES2Q9H7Z7 377 aa10.29□□□□□ -0.76
SHMT2-220ENST00000555634 LRFN1Q9P244 771 aa10.29□□□□□ -0.76
SHMT2-220ENST00000555634 GMPR2Q9P2T1 348 aaKnown RBP10.29□□□□□ -0.76
SHMT2-220ENST00000555634 KLF13Q9Y2Y9 288 aaPredicted RBP10.29□□□□□ -0.76
SHMT2-220ENST00000555634 SH3GLB1Q9Y371 365 aa10.29□□□□□ -0.76
SHMT2-220ENST00000555634 AP4S1Q9Y587 144 aa10.29□□□□□ -0.76
SHMT2-220ENST00000555634 WIF1Q9Y5W5 379 aa10.29□□□□□ -0.76
SHMT2-220ENST00000555634 KCNMB2Q9Y691 235 aa10.29□□□□□ -0.76
SHMT2-220ENST00000555634 ACACAQ13085 2346 aa10.29□□□□□ -0.76
SHMT2-220ENST00000555634 TPRP12270 2363 aaKnown RBP10.29□□□□□ -0.76
SHMT2-220ENST00000555634 PRAMEF27A3QJZ7 478 aa10.28□□□□□ -0.76
SHMT2-220ENST00000555634 CDHR4A6H8M9 788 aa10.28□□□□□ -0.76
SHMT2-220ENST00000555634 OR5H15A6NDH6 313 aa10.28□□□□□ -0.76
SHMT2-220ENST00000555634 C1QTNF9BB2RNN3 333 aa10.28□□□□□ -0.76
SHMT2-220ENST00000555634 ALG1L2C9J202 215 aa10.28□□□□□ -0.76
SHMT2-220ENST00000555634 K7ENP7 123 aa10.28□□□□□ -0.76
SHMT2-220ENST00000555634 ADAMDEC1O15204 470 aa10.28□□□□□ -0.76
SHMT2-220ENST00000555634 HCRTR2O43614 444 aa10.28□□□□□ -0.76
SHMT2-220ENST00000555634 ENTPD5O75356 428 aa10.28□□□□□ -0.76
SHMT2-220ENST00000555634 DEAF1O75398 565 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-220ENST00000555634 SLC25A12O75746 678 aa10.28□□□□□ -0.76
SHMT2-220ENST00000555634 OR6B1O95007 311 aa10.28□□□□□ -0.76
SHMT2-220ENST00000555634 SNX4O95219 450 aa10.28□□□□□ -0.76
SHMT2-220ENST00000555634 IGKV1D-16P01601 117 aa10.28□□□□□ -0.76
SHMT2-220ENST00000555634 ITGB2P05107 769 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms