RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 GLB1L3Q8NCI6 653 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-219ENST00000555563 OR10Q1Q8NGQ4 319 aa12.44□□□□□ -0.42
SHMT2-219ENST00000555563 CKAP2Q8WWK9 683 aa12.44□□□□□ -0.42
SHMT2-219ENST00000555563 ASB5Q8WWX0 329 aa12.44□□□□□ -0.42
SHMT2-219ENST00000555563 C1GALT1C1Q96EU7 318 aa12.44□□□□□ -0.42
SHMT2-219ENST00000555563 OR52E6Q96RD3 313 aa12.44□□□□□ -0.42
SHMT2-219ENST00000555563 SLC35A5Q9BS91 424 aa12.44□□□□□ -0.42
SHMT2-219ENST00000555563 INPP5KQ9BT40 448 aa12.44□□□□□ -0.42
SHMT2-219ENST00000555563 PTGES2Q9H7Z7 377 aa12.44□□□□□ -0.42
SHMT2-219ENST00000555563 UBQLN4Q9NRR5 601 aa12.44□□□□□ -0.42
SHMT2-219ENST00000555563 Q9UFV3 132 aa12.44□□□□□ -0.42
SHMT2-219ENST00000555563 BTNL2Q9UIR0 455 aa12.44□□□□□ -0.42
SHMT2-219ENST00000555563 MRPS18CQ9Y3D5 142 aaKnown RBP12.44□□□□□ -0.42
SHMT2-219ENST00000555563 NUP214P35658 2090 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-219ENST00000555563 ARHGAP21Q5T5U3 1957 aa12.43□□□□□ -0.42
SHMT2-219ENST00000555563 KIAA1549Q9HCM3 1950 aa12.43□□□□□ -0.42
SHMT2-219ENST00000555563 C19orf84I3L1E1 186 aa12.43□□□□□ -0.42
SHMT2-219ENST00000555563 SLC22A3O75751 556 aa12.43□□□□□ -0.42
SHMT2-219ENST00000555563 TOXO94900 526 aa12.43□□□□□ -0.42
SHMT2-219ENST00000555563 C1QCP02747 245 aa12.43□□□□□ -0.42
SHMT2-219ENST00000555563 HPGDP15428 266 aa12.43□□□□□ -0.42
SHMT2-219ENST00000555563 CDKN2CP42773 168 aa12.43□□□□□ -0.42
SHMT2-219ENST00000555563 ZFP36L2P47974 494 aaKnown RBP12.43□□□□□ -0.42
SHMT2-219ENST00000555563 STARP49675 285 aa12.43□□□□□ -0.42
SHMT2-219ENST00000555563 LHX2P50458 406 aa12.43□□□□□ -0.42
SHMT2-219ENST00000555563 RNF144AP50876 292 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-219ENST00000555563 RIPPLY2Q5TAB7 128 aa12.43□□□□□ -0.42
SHMT2-219ENST00000555563 RAET1LQ5VY80 246 aa12.43□□□□□ -0.42
SHMT2-219ENST00000555563 SAXO2Q658L1 398 aa12.43□□□□□ -0.42
SHMT2-219ENST00000555563 TNFAIP8L2Q6P589 184 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-219ENST00000555563 AAGABQ6PD74 315 aa12.43□□□□□ -0.42
SHMT2-219ENST00000555563 ENPP6Q6UWR7 440 aa12.43□□□□□ -0.42
SHMT2-219ENST00000555563 DNAJC14Q6Y2X3 702 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-219ENST00000555563 LACC1Q8IV20 430 aa12.43□□□□□ -0.42
SHMT2-219ENST00000555563 CHDHQ8NE62 594 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-219ENST00000555563 OR9I1Q8NGQ6 314 aa12.43□□□□□ -0.42
SHMT2-219ENST00000555563 GOT1L1Q8NHS2 421 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-219ENST00000555563 MIPOL1Q8TD10 442 aa12.43□□□□□ -0.42
SHMT2-219ENST00000555563 NEURL3Q96EH8 262 aa12.43□□□□□ -0.42
SHMT2-219ENST00000555563 PANX1Q96RD7 426 aa12.43□□□□□ -0.42
SHMT2-219ENST00000555563 TRIB1Q96RU8 372 aa12.43□□□□□ -0.42
SHMT2-219ENST00000555563 EBF4Q9BQW3 602 aa12.43□□□□□ -0.42
SHMT2-219ENST00000555563 OR51I1Q9H343 314 aa12.43□□□□□ -0.42
SHMT2-219ENST00000555563 ACBD3Q9H3P7 528 aa12.43□□□□□ -0.42
SHMT2-219ENST00000555563 TCF7L2Q9NQB0 619 aa12.43□□□□□ -0.42
SHMT2-219ENST00000555563 ZIM2Q9NZV7 527 aa12.43□□□□□ -0.42
SHMT2-219ENST00000555563 CACNA1CQ13936 2221 aa12.43□□□□□ -0.42
SHMT2-219ENST00000555563 MED12Q93074 2177 aa12.43□□□□□ -0.42
SHMT2-219ENST00000555563 A0A1W2PQD3 144 aa12.42□□□□□ -0.42
SHMT2-219ENST00000555563 NKX2-6A6NCS4 301 aa12.42□□□□□ -0.42
SHMT2-219ENST00000555563 DUXAA6NLW8 204 aa12.42□□□□□ -0.42
SHMT2-219ENST00000555563 NPIPB9F8W1W9 429 aa12.42□□□□□ -0.42
SHMT2-219ENST00000555563 H0Y3Z8 333 aa12.42□□□□□ -0.42
SHMT2-219ENST00000555563 POLR3GO15318 223 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-219ENST00000555563 SOX30O94993 753 aa12.42□□□□□ -0.42
SHMT2-219ENST00000555563 TGDSO95455 350 aa12.42□□□□□ -0.42
SHMT2-219ENST00000555563 EPPINO95925 133 aa12.42□□□□□ -0.42
SHMT2-219ENST00000555563 CPN1P15169 458 aa12.42□□□□□ -0.42
SHMT2-219ENST00000555563 ZNF708P17019 499 aa12.42□□□□□ -0.42
SHMT2-219ENST00000555563 CHMP24386 653 aa12.42□□□□□ -0.42
SHMT2-219ENST00000555563 CHI3L1P36222 383 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-219ENST00000555563 KHKP50053 298 aa12.42□□□□□ -0.42
SHMT2-219ENST00000555563 IDH3AP50213 366 aa12.42□□□□□ -0.42
SHMT2-219ENST00000555563 AQP5P55064 265 aa12.42□□□□□ -0.42
SHMT2-219ENST00000555563 CLDN18P56856 261 aa12.42□□□□□ -0.42
SHMT2-219ENST00000555563 SRYQ05066 204 aa12.42□□□□□ -0.42
SHMT2-219ENST00000555563 FLYWCH1Q4VC44 716 aa12.42□□□□□ -0.42
SHMT2-219ENST00000555563 TIGD2Q4W5G0 525 aa12.42□□□□□ -0.42
SHMT2-219ENST00000555563 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.42□□□□□ -0.42
SHMT2-219ENST00000555563 NSUN5P2Q63ZY6 315 aa12.42□□□□□ -0.42
SHMT2-219ENST00000555563 SP5Q6BEB4 398 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-219ENST00000555563 ARSKQ6UWY0 536 aa12.42□□□□□ -0.42
SHMT2-219ENST00000555563 OLIG3Q7RTU3 272 aa12.42□□□□□ -0.42
SHMT2-219ENST00000555563 MIER2Q8N344 545 aa12.42□□□□□ -0.42
SHMT2-219ENST00000555563 ZNF527Q8NB42 609 aa12.42□□□□□ -0.42
SHMT2-219ENST00000555563 NAXEQ8NCW5 288 aa12.42□□□□□ -0.42
SHMT2-219ENST00000555563 OR5M1Q8NGP8 315 aa12.42□□□□□ -0.42
SHMT2-219ENST00000555563 LILRB4Q8NHJ6 448 aa12.42□□□□□ -0.42
SHMT2-219ENST00000555563 RAB8BQ92930 207 aa12.42□□□□□ -0.42
SHMT2-219ENST00000555563 SH3YL1Q96HL8 342 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-219ENST00000555563 MAGEB18Q96M61 343 aa12.42□□□□□ -0.42
SHMT2-219ENST00000555563 SDF2Q99470 211 aa12.42□□□□□ -0.42
SHMT2-219ENST00000555563 KLHDC3Q9BQ90 382 aa12.42□□□□□ -0.42
SHMT2-219ENST00000555563 TUBA1CQ9BQE3 449 aa12.42□□□□□ -0.42
SHMT2-219ENST00000555563 UCK2Q9BZX2 261 aa12.42□□□□□ -0.42
SHMT2-219ENST00000555563 HHATLQ9HCP6 504 aa12.42□□□□□ -0.42
SHMT2-219ENST00000555563 CHST11Q9NPF2 352 aa12.42□□□□□ -0.42
SHMT2-219ENST00000555563 CCDC154A6NI56 674 aa12.41□□□□□ -0.42
SHMT2-219ENST00000555563 CD8B2A6NJW9 211 aa12.41□□□□□ -0.42
SHMT2-219ENST00000555563 SHISA8B8ZZ34 492 aa12.41□□□□□ -0.42
SHMT2-219ENST00000555563 FAM47E-STBD1D6RA91 191 aa12.41□□□□□ -0.42
SHMT2-219ENST00000555563 TNFRSF21O75509 655 aa12.41□□□□□ -0.42
SHMT2-219ENST00000555563 AK1P00568 194 aa12.41□□□□□ -0.42
SHMT2-219ENST00000555563 IL6P05231 212 aa12.41□□□□□ -0.42
SHMT2-219ENST00000555563 GSNP06396 782 aa12.41□□□□□ -0.42
SHMT2-219ENST00000555563 OR12D1P0DN82 309 aa12.41□□□□□ -0.42
SHMT2-219ENST00000555563 POU3F2P20265 443 aaPredicted RBP12.41□□□□□ -0.42
SHMT2-219ENST00000555563 ZNF117Q03924 483 aa12.41□□□□□ -0.42
SHMT2-219ENST00000555563 LRRC74AQ0VAA2 488 aa12.41□□□□□ -0.42
SHMT2-219ENST00000555563 FUT5Q11128 374 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms