RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 FAM47E-STBD1D6RA91 191 aa18.56■□□□□ 0.56
VTI1B-205ENST00000555543 E9PBE3 544 aa18.56■□□□□ 0.56
VTI1B-205ENST00000555543 NPIPA7E9PJI5 369 aa18.56■□□□□ 0.56
VTI1B-205ENST00000555543 H0Y3Z8 333 aa18.56■□□□□ 0.56
VTI1B-205ENST00000555543 ZNF195O14628 629 aa18.56■□□□□ 0.56
VTI1B-205ENST00000555543 NPIPA8P0DM63 369 aa18.56■□□□□ 0.56
VTI1B-205ENST00000555543 ZNF708P17019 499 aa18.56■□□□□ 0.56
VTI1B-205ENST00000555543 IGFBP2P18065 325 aa18.56■□□□□ 0.56
VTI1B-205ENST00000555543 HK1P19367 917 aa18.56■□□□□ 0.56
VTI1B-205ENST00000555543 CHMP24386 653 aa18.56■□□□□ 0.56
VTI1B-205ENST00000555543 MSX1P28360 303 aa18.56■□□□□ 0.56
VTI1B-205ENST00000555543 TIMP3P35625 211 aa18.56■□□□□ 0.56
VTI1B-205ENST00000555543 CLNS1AP54105 237 aaKnown RBP18.56■□□□□ 0.56
VTI1B-205ENST00000555543 C17orf67Q0P5P2 114 aa18.56■□□□□ 0.56
VTI1B-205ENST00000555543 GANABQ14697 944 aaKnown RBP18.56■□□□□ 0.56
VTI1B-205ENST00000555543 FAM174BQ3ZCQ3 159 aa18.56■□□□□ 0.56
VTI1B-205ENST00000555543 DCST2Q5T1A1 773 aa18.56■□□□□ 0.56
VTI1B-205ENST00000555543 RAET1LQ5VY80 246 aa18.56■□□□□ 0.56
VTI1B-205ENST00000555543 ARSKQ6UWY0 536 aa18.56■□□□□ 0.56
VTI1B-205ENST00000555543 SPATA19Q7Z5L4 167 aa18.56■□□□□ 0.56
VTI1B-205ENST00000555543 ADGRE4PQ86SQ3 457 aa18.56■□□□□ 0.56
VTI1B-205ENST00000555543 ZNF295-AS1Q8N0V1 137 aa18.56■□□□□ 0.56
VTI1B-205ENST00000555543 RELL2Q8NC24 303 aaPredicted RBP18.56■□□□□ 0.56
VTI1B-205ENST00000555543 OR5M1Q8NGP8 315 aa18.56■□□□□ 0.56
VTI1B-205ENST00000555543 ZPLD1Q8TCW7 415 aa18.56■□□□□ 0.56
VTI1B-205ENST00000555543 MAELQ96JY0 434 aaKnown RBP18.56■□□□□ 0.56
VTI1B-205ENST00000555543 MARK4Q96L34 752 aa18.56■□□□□ 0.56
VTI1B-205ENST00000555543 OR7D2Q96RA2 312 aa18.56■□□□□ 0.56
VTI1B-205ENST00000555543 TREX2Q9BQ50 279 aaPredicted RBP18.56■□□□□ 0.56
VTI1B-205ENST00000555543 KLHDC3Q9BQ90 382 aa18.56■□□□□ 0.56
VTI1B-205ENST00000555543 GPR45Q9Y5Y3 372 aa18.56■□□□□ 0.56
VTI1B-205ENST00000555543 PRSS51A0A1B0GVH4 220 aa18.55■□□□□ 0.56
VTI1B-205ENST00000555543 MBD3L4A6NDZ8 208 aaPredicted RBP18.55■□□□□ 0.56
VTI1B-205ENST00000555543 MBD3L3A6NE82 208 aaPredicted RBP18.55■□□□□ 0.56
VTI1B-205ENST00000555543 MBD3L5A6NJ08 208 aaPredicted RBP18.55■□□□□ 0.56
VTI1B-205ENST00000555543 HSPB2A8KAH6 182 aa18.55■□□□□ 0.56
VTI1B-205ENST00000555543 SHISA8B8ZZ34 492 aa18.55■□□□□ 0.56
VTI1B-205ENST00000555543 SLCO1B7G3V0H7 640 aa18.55■□□□□ 0.56
VTI1B-205ENST00000555543 NDUFB5O43674 189 aa18.55■□□□□ 0.56
VTI1B-205ENST00000555543 KRT16P08779 473 aa18.55■□□□□ 0.56
VTI1B-205ENST00000555543 LCN1P31025 176 aa18.55■□□□□ 0.56
VTI1B-205ENST00000555543 CD226Q15762 336 aa18.55■□□□□ 0.56
VTI1B-205ENST00000555543 HSPB2Q16082 182 aa18.55■□□□□ 0.56
VTI1B-205ENST00000555543 DPY19L1Q2PZI1 675 aa18.55■□□□□ 0.56
VTI1B-205ENST00000555543 POMZP3Q6PJE2 187 aa18.55■□□□□ 0.56
VTI1B-205ENST00000555543 MEX3BQ6ZN04 569 aaKnown RBP18.55■□□□□ 0.56
VTI1B-205ENST00000555543 C6orf120Q7Z4R8 191 aa18.55■□□□□ 0.56
VTI1B-205ENST00000555543 C9orf106Q8NAJ2 232 aa18.55■□□□□ 0.56
VTI1B-205ENST00000555543 MBD3L2Q8NHZ7 208 aaPredicted RBP18.55■□□□□ 0.56
VTI1B-205ENST00000555543 PIWIL2Q8TC59 973 aaKnown RBP18.55■□□□□ 0.56
VTI1B-205ENST00000555543 SPOCK3Q9BQ16 436 aa18.55■□□□□ 0.56
VTI1B-205ENST00000555543 PTGES2Q9H7Z7 377 aa18.55■□□□□ 0.56
VTI1B-205ENST00000555543 UBQLN4Q9NRR5 601 aa18.55■□□□□ 0.56
VTI1B-205ENST00000555543 INTS1Q8N201 2190 aaKnown RBP18.55■□□□□ 0.56
VTI1B-205ENST00000555543 OR2M5A3KFT3 312 aa18.54■□□□□ 0.56
VTI1B-205ENST00000555543 CPSF4O95639 269 aaKnown RBP18.54■□□□□ 0.56
VTI1B-205ENST00000555543 C1QCP02747 245 aa18.54■□□□□ 0.56
VTI1B-205ENST00000555543 RNF144AP50876 292 aaPredicted RBP18.54■□□□□ 0.56
VTI1B-205ENST00000555543 ZNF136P52737 540 aa18.54■□□□□ 0.56
VTI1B-205ENST00000555543 DGKQP52824 942 aa18.54■□□□□ 0.56
VTI1B-205ENST00000555543 CASP9P55211 416 aa18.54■□□□□ 0.56
VTI1B-205ENST00000555543 RCAN2Q14206 197 aa18.54■□□□□ 0.56
VTI1B-205ENST00000555543 SF3B4Q15427 424 aaKnown RBP eCLIP18.54■□□□□ 0.56
VTI1B-205ENST00000555543 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.54■□□□□ 0.56
VTI1B-205ENST00000555543 ANXA8L1Q5VT79 327 aa18.54■□□□□ 0.56
VTI1B-205ENST00000555543 NXNQ6DKJ4 435 aa18.54■□□□□ 0.56
VTI1B-205ENST00000555543 HDXQ7Z353 690 aa18.54■□□□□ 0.56
VTI1B-205ENST00000555543 SLC35G5Q96KT7 338 aa18.54■□□□□ 0.56
VTI1B-205ENST00000555543 OR52B2Q96RD2 323 aa18.54■□□□□ 0.56
VTI1B-205ENST00000555543 CALHM2Q9HA72 323 aa18.54■□□□□ 0.56
VTI1B-205ENST00000555543 CLCF1Q9UBD9 225 aa18.54■□□□□ 0.56
VTI1B-205ENST00000555543 ZNF337Q9Y3M9 751 aa18.54■□□□□ 0.56
VTI1B-205ENST00000555543 DOCK7Q96N67 2140 aa18.53■□□□□ 0.56
VTI1B-205ENST00000555543 A0A1W2PQD3 144 aa18.53■□□□□ 0.56
VTI1B-205ENST00000555543 CLCA1A8K7I4 914 aa18.53■□□□□ 0.56
VTI1B-205ENST00000555543 H0YC42 278 aa18.53■□□□□ 0.56
VTI1B-205ENST00000555543 SCDO00767 359 aa18.53■□□□□ 0.56
VTI1B-205ENST00000555543 IL2RAP01589 272 aa18.53■□□□□ 0.56
VTI1B-205ENST00000555543 ATP6V1C1P21283 382 aa18.53■□□□□ 0.56
VTI1B-205ENST00000555543 MATN1P21941 496 aa18.53■□□□□ 0.56
VTI1B-205ENST00000555543 BMP5P22003 454 aa18.53■□□□□ 0.56
VTI1B-205ENST00000555543 S100A3P33764 101 aa18.53■□□□□ 0.56
VTI1B-205ENST00000555543 TPD52P55327 224 aaPredicted RBP18.53■□□□□ 0.56
VTI1B-205ENST00000555543 CLDN15P56746 228 aa18.53■□□□□ 0.56
VTI1B-205ENST00000555543 TMEM44Q2T9K0 475 aa18.53■□□□□ 0.56
VTI1B-205ENST00000555543 SLC25A35Q3KQZ1 300 aa18.53■□□□□ 0.56
VTI1B-205ENST00000555543 BHLHB9Q6PI77 547 aa18.53■□□□□ 0.56
VTI1B-205ENST00000555543 OLIG3Q7RTU3 272 aa18.53■□□□□ 0.56
VTI1B-205ENST00000555543 UBQLNLQ8IYU4 475 aa18.53■□□□□ 0.56
VTI1B-205ENST00000555543 ACTRT2Q8TDY3 377 aa18.53■□□□□ 0.56
VTI1B-205ENST00000555543 SH3YL1Q96HL8 342 aaPredicted RBP18.53■□□□□ 0.56
VTI1B-205ENST00000555543 CCDC115Q96NT0 180 aa18.53■□□□□ 0.56
VTI1B-205ENST00000555543 NPAS1Q99742 590 aa18.53■□□□□ 0.56
VTI1B-205ENST00000555543 SLCO1B3Q9NPD5 702 aa18.53■□□□□ 0.56
VTI1B-205ENST00000555543 ARGLU1Q9NWB6 273 aaPredicted RBP18.53■□□□□ 0.56
VTI1B-205ENST00000555543 PCDHGB4Q9UN71 923 aa18.53■□□□□ 0.56
VTI1B-205ENST00000555543 VDAC3Q9Y277 283 aa18.53■□□□□ 0.56
VTI1B-205ENST00000555543 NPIPB9F8W1W9 429 aa18.52■□□□□ 0.56
VTI1B-205ENST00000555543 OIP5O43482 229 aa18.52■□□□□ 0.56
VTI1B-205ENST00000555543 HPGDP15428 266 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms