RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 AKAP6Q13023 2319 aa14.34□□□□□ -0.11
CDK4-215ENST00000553237 A6NNC1 897 aa14.34□□□□□ -0.11
CDK4-215ENST00000553237 HCRTR2O43614 444 aa14.34□□□□□ -0.11
CDK4-215ENST00000553237 NDUFB5O43674 189 aa14.34□□□□□ -0.11
CDK4-215ENST00000553237 HMGN2P05204 90 aaKnown RBP14.34□□□□□ -0.11
CDK4-215ENST00000553237 DNAJA1P31689 397 aaKnown RBP14.34□□□□□ -0.11
CDK4-215ENST00000553237 RPL3P39023 403 aaKnown RBP14.34□□□□□ -0.11
CDK4-215ENST00000553237 CPA2P48052 419 aa14.34□□□□□ -0.11
CDK4-215ENST00000553237 SLC1A6P48664 564 aa14.34□□□□□ -0.11
CDK4-215ENST00000553237 PRIM2P49643 509 aa14.34□□□□□ -0.11
CDK4-215ENST00000553237 DIO3P55073 304 aa14.34□□□□□ -0.11
CDK4-215ENST00000553237 CLDN20P56880 219 aa14.34□□□□□ -0.11
CDK4-215ENST00000553237 WDR4P57081 412 aaKnown RBP14.34□□□□□ -0.11
CDK4-215ENST00000553237 STX3Q13277 289 aa14.34□□□□□ -0.11
CDK4-215ENST00000553237 LASP1Q14847 261 aaKnown RBP14.34□□□□□ -0.11
CDK4-215ENST00000553237 MLC1Q15049 377 aa14.34□□□□□ -0.11
CDK4-215ENST00000553237 ZCCHC12Q6PEW1 402 aa14.34□□□□□ -0.11
CDK4-215ENST00000553237 COX18Q8N8Q8 333 aa14.34□□□□□ -0.11
CDK4-215ENST00000553237 MGARPQ8TDB4 240 aa14.34□□□□□ -0.11
CDK4-215ENST00000553237 OR5P2Q8WZ92 322 aa14.34□□□□□ -0.11
CDK4-215ENST00000553237 FIG4Q92562 907 aa14.34□□□□□ -0.11
CDK4-215ENST00000553237 PIGQQ9BRB3 760 aa14.34□□□□□ -0.11
CDK4-215ENST00000553237 C20orf27Q9GZN8 174 aa14.34□□□□□ -0.11
CDK4-215ENST00000553237 CLEC4MQ9H2X3 399 aaPredicted RBP14.34□□□□□ -0.11
CDK4-215ENST00000553237 LIME1Q9H400 295 aa14.34□□□□□ -0.11
CDK4-215ENST00000553237 VDAC3Q9Y277 283 aa14.34□□□□□ -0.11
CDK4-215ENST00000553237 AKAP9Q99996 3911 aa14.34□□□□□ -0.11
CDK4-215ENST00000553237 IGLV3-32A0A0A0MS00 114 aa14.33□□□□□ -0.12
CDK4-215ENST00000553237 A0A1W2PNV4 684 aa14.33□□□□□ -0.12
CDK4-215ENST00000553237 SLC22A20A6NK97 555 aa14.33□□□□□ -0.12
CDK4-215ENST00000553237 ALG1L2C9J202 215 aa14.33□□□□□ -0.12
CDK4-215ENST00000553237 C6orf47O95873 294 aa14.33□□□□□ -0.12
CDK4-215ENST00000553237 G6PDP11413 515 aa14.33□□□□□ -0.12
CDK4-215ENST00000553237 TBXA2RP21731 343 aa14.33□□□□□ -0.12
CDK4-215ENST00000553237 CCT3P49368 545 aaKnown RBP14.33□□□□□ -0.12
CDK4-215ENST00000553237 POU6F2P78424 691 aaPredicted RBP14.33□□□□□ -0.12
CDK4-215ENST00000553237 PDCD2Q16342 344 aaPredicted RBP14.33□□□□□ -0.12
CDK4-215ENST00000553237 SPDYE7PQ495Y7 208 aa14.33□□□□□ -0.12
CDK4-215ENST00000553237 ZNF781Q8N8C0 355 aa14.33□□□□□ -0.12
CDK4-215ENST00000553237 CNEP1R1Q8N9A8 125 aa14.33□□□□□ -0.12
CDK4-215ENST00000553237 GOT1L1Q8NHS2 421 aaPredicted RBP14.33□□□□□ -0.12
CDK4-215ENST00000553237 CDS1Q92903 461 aa14.33□□□□□ -0.12
CDK4-215ENST00000553237 ARL8AQ96BM9 186 aa14.33□□□□□ -0.12
CDK4-215ENST00000553237 SH3YL1Q96HL8 342 aaPredicted RBP14.33□□□□□ -0.12
CDK4-215ENST00000553237 ZNF845Q96IR2 970 aaPredicted RBP14.33□□□□□ -0.12
CDK4-215ENST00000553237 PRPF18Q99633 342 aaKnown RBP14.33□□□□□ -0.12
CDK4-215ENST00000553237 PINK1Q9BXM7 581 aa14.33□□□□□ -0.12
CDK4-215ENST00000553237 ACBD3Q9H3P7 528 aa14.33□□□□□ -0.12
CDK4-215ENST00000553237 CXorf36Q9H7Y0 433 aa14.33□□□□□ -0.12
CDK4-215ENST00000553237 ARGLU1Q9NWB6 273 aaPredicted RBP14.33□□□□□ -0.12
CDK4-215ENST00000553237 GALNT8Q9NY28 637 aa14.33□□□□□ -0.12
CDK4-215ENST00000553237 NKIRAS1Q9NYS0 192 aa14.33□□□□□ -0.12
CDK4-215ENST00000553237 EIF3LQ9Y262 564 aaKnown RBP14.33□□□□□ -0.12
CDK4-215ENST00000553237 RAP2CQ9Y3L5 183 aa14.33□□□□□ -0.12
CDK4-215ENST00000553237 MED12LQ86YW9 2145 aa14.32□□□□□ -0.12
CDK4-215ENST00000553237 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.32□□□□□ -0.12
CDK4-215ENST00000553237 FAM221AA4D161 298 aa14.32□□□□□ -0.12
CDK4-215ENST00000553237 A8MXE2 369 aa14.32□□□□□ -0.12
CDK4-215ENST00000553237 LINC01387J3KSC0 135 aa14.32□□□□□ -0.12
CDK4-215ENST00000553237 CFLARO15519 480 aa14.32□□□□□ -0.12
CDK4-215ENST00000553237 TNFSF13O75888 250 aa14.32□□□□□ -0.12
CDK4-215ENST00000553237 SMNDC1O75940 238 aaKnown RBP eCLIP14.32□□□□□ -0.12
CDK4-215ENST00000553237 OPN1LWP04000 364 aa14.32□□□□□ -0.12
CDK4-215ENST00000553237 EPXP11678 715 aa14.32□□□□□ -0.12
CDK4-215ENST00000553237 HPGDP15428 266 aa14.32□□□□□ -0.12
CDK4-215ENST00000553237 PRPS1L1P21108 318 aa14.32□□□□□ -0.12
CDK4-215ENST00000553237 RNF144AP50876 292 aaPredicted RBP14.32□□□□□ -0.12
CDK4-215ENST00000553237 ART1P52961 327 aa14.32□□□□□ -0.12
CDK4-215ENST00000553237 IST1P53990 364 aa14.32□□□□□ -0.12
CDK4-215ENST00000553237 SLC18A1P54219 525 aa14.32□□□□□ -0.12
CDK4-215ENST00000553237 EEFSECP57772 596 aaKnown RBP14.32□□□□□ -0.12
CDK4-215ENST00000553237 SIRPAP78324 504 aa14.32□□□□□ -0.12
CDK4-215ENST00000553237 BST1Q10588 318 aa14.32□□□□□ -0.12
CDK4-215ENST00000553237 TP53BP2Q13625 1128 aa14.32□□□□□ -0.12
CDK4-215ENST00000553237 DAZAP2Q15038 168 aaPredicted RBP14.32□□□□□ -0.12
CDK4-215ENST00000553237 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.32□□□□□ -0.12
CDK4-215ENST00000553237 PGS1Q32NB8 556 aa14.32□□□□□ -0.12
CDK4-215ENST00000553237 LSM12Q3MHD2 195 aaKnown RBP14.32□□□□□ -0.12
CDK4-215ENST00000553237 GLYR1Q49A26 553 aaPredicted RBP14.32□□□□□ -0.12
CDK4-215ENST00000553237 EXOSC6Q5RKV6 272 aaKnown RBP14.32□□□□□ -0.12
CDK4-215ENST00000553237 AGBL2Q5U5Z8 902 aa14.32□□□□□ -0.12
CDK4-215ENST00000553237 FBXW10Q5XX13 1052 aa14.32□□□□□ -0.12
CDK4-215ENST00000553237 CDC20BQ86Y33 519 aa14.32□□□□□ -0.12
CDK4-215ENST00000553237 COQ8BQ96D53 544 aa14.32□□□□□ -0.12
CDK4-215ENST00000553237 SORT1Q99523 831 aa14.32□□□□□ -0.12
CDK4-215ENST00000553237 NPAS1Q99742 590 aa14.32□□□□□ -0.12
CDK4-215ENST00000553237 BTBD2Q9BX70 525 aa14.32□□□□□ -0.12
CDK4-215ENST00000553237 PIGMQ9H3S5 423 aa14.32□□□□□ -0.12
CDK4-215ENST00000553237 UBQLN4Q9NRR5 601 aa14.32□□□□□ -0.12
CDK4-215ENST00000553237 ATAD3AQ9NVI7 634 aa14.32□□□□□ -0.12
CDK4-215ENST00000553237 GIN1Q9NXP7 522 aa14.32□□□□□ -0.12
CDK4-215ENST00000553237 PACSIN3Q9UKS6 424 aa14.32□□□□□ -0.12
CDK4-215ENST00000553237 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.32□□□□□ -0.12
CDK4-215ENST00000553237 KCNE3Q9Y6H6 103 aa14.32□□□□□ -0.12
CDK4-215ENST00000553237 NPIPA5A0A0B4J1W7 369 aa14.31□□□□□ -0.12
CDK4-215ENST00000553237 NPIPA7E9PJI5 369 aa14.31□□□□□ -0.12
CDK4-215ENST00000553237 SCDO00767 359 aa14.31□□□□□ -0.12
CDK4-215ENST00000553237 TNFRSF21O75509 655 aa14.31□□□□□ -0.12
CDK4-215ENST00000553237 SNUPNO95149 360 aaKnown RBP14.31□□□□□ -0.12
CDK4-215ENST00000553237 NGFRP08138 427 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms