RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 PTGES2Q9H7Z7 377 aa11.22□□□□□ -0.61
COPS7A-221ENST00000546229 SDHAF3Q9NRP4 125 aa11.22□□□□□ -0.61
COPS7A-221ENST00000546229 FBXO34Q9NWN3 711 aa11.22□□□□□ -0.61
COPS7A-221ENST00000546229 SENP1Q9P0U3 644 aa11.22□□□□□ -0.61
COPS7A-221ENST00000546229 CLEC4AQ9UMR7 237 aa11.22□□□□□ -0.61
COPS7A-221ENST00000546229 PTGDR2Q9Y5Y4 395 aa11.22□□□□□ -0.61
COPS7A-221ENST00000546229 A0A0J9YW62 118 aa11.21□□□□□ -0.61
COPS7A-221ENST00000546229 A0A1W2PRB8 838 aa11.21□□□□□ -0.61
COPS7A-221ENST00000546229 EIF1AYO14602 144 aaKnown RBP11.21□□□□□ -0.61
COPS7A-221ENST00000546229 HS3ST1O14792 307 aa11.21□□□□□ -0.61
COPS7A-221ENST00000546229 RIPK2O43353 540 aa11.21□□□□□ -0.61
COPS7A-221ENST00000546229 TBX19O60806 448 aa11.21□□□□□ -0.61
COPS7A-221ENST00000546229 TMCC2O75069 709 aa11.21□□□□□ -0.61
COPS7A-221ENST00000546229 GSTA1P08263 222 aa11.21□□□□□ -0.61
COPS7A-221ENST00000546229 PPP3CBP16298 524 aa11.21□□□□□ -0.61
COPS7A-221ENST00000546229 NTSP30990 170 aa11.21□□□□□ -0.61
COPS7A-221ENST00000546229 RPS3AP61247 264 aaKnown RBP11.21□□□□□ -0.61
COPS7A-221ENST00000546229 C17orf67Q0P5P2 114 aa11.21□□□□□ -0.61
COPS7A-221ENST00000546229 CD226Q15762 336 aa11.21□□□□□ -0.61
COPS7A-221ENST00000546229 WHAMMP3Q1A5X7 153 aa11.21□□□□□ -0.61
COPS7A-221ENST00000546229 LGSNQ5TDP6 509 aa11.21□□□□□ -0.61
COPS7A-221ENST00000546229 MFSD12Q6NUT3 480 aa11.21□□□□□ -0.61
COPS7A-221ENST00000546229 ADAM5Q6NVV9 412 aa11.21□□□□□ -0.61
COPS7A-221ENST00000546229 ZYG11AQ6WRX3 759 aa11.21□□□□□ -0.61
COPS7A-221ENST00000546229 PLEKHM3Q6ZWE6 761 aa11.21□□□□□ -0.61
COPS7A-221ENST00000546229 CHMP1BQ7LBR1 199 aa11.21□□□□□ -0.61
COPS7A-221ENST00000546229 CXXC5Q7LFL8 322 aaKnown RBP11.21□□□□□ -0.61
COPS7A-221ENST00000546229 ATG4DQ86TL0 474 aaPredicted RBP11.21□□□□□ -0.61
COPS7A-221ENST00000546229 EXOC3L1Q86VI1 746 aa11.21□□□□□ -0.61
COPS7A-221ENST00000546229 GABRG1Q8N1C3 465 aa11.21□□□□□ -0.61
COPS7A-221ENST00000546229 OR2T11Q8NH01 316 aa11.21□□□□□ -0.61
COPS7A-221ENST00000546229 ACMSDQ8TDX5 336 aa11.21□□□□□ -0.61
COPS7A-221ENST00000546229 RNF128Q8TEB7 428 aa11.21□□□□□ -0.61
COPS7A-221ENST00000546229 GFM2Q969S9 779 aaKnown RBP11.21□□□□□ -0.61
COPS7A-221ENST00000546229 CIDECQ96AQ7 238 aaPredicted RBP11.21□□□□□ -0.61
COPS7A-221ENST00000546229 KLHL4Q9C0H6 718 aa11.21□□□□□ -0.61
COPS7A-221ENST00000546229 MID1IP1Q9NPA3 183 aa11.21□□□□□ -0.61
COPS7A-221ENST00000546229 SIRT3Q9NTG7 399 aaPredicted RBP11.21□□□□□ -0.61
COPS7A-221ENST00000546229 MED17Q9NVC6 651 aa11.21□□□□□ -0.61
COPS7A-221ENST00000546229 VDAC3Q9Y277 283 aa11.21□□□□□ -0.61
COPS7A-221ENST00000546229 WBP11Q9Y2W2 641 aaKnown RBP11.21□□□□□ -0.61
COPS7A-221ENST00000546229 CADP27708 2225 aa11.2□□□□□ -0.62
COPS7A-221ENST00000546229 A0A087WZY1 265 aa11.2□□□□□ -0.62
COPS7A-221ENST00000546229 TTC36A6NLP5 189 aa11.2□□□□□ -0.62
COPS7A-221ENST00000546229 GOLGA8RI6L899 631 aa11.2□□□□□ -0.62
COPS7A-221ENST00000546229 EFNA2O43921 213 aa11.2□□□□□ -0.62
COPS7A-221ENST00000546229 CXCL13O43927 109 aa11.2□□□□□ -0.62
COPS7A-221ENST00000546229 PROCP04070 461 aa11.2□□□□□ -0.62
COPS7A-221ENST00000546229 LINGO3P0C6S8 592 aa11.2□□□□□ -0.62
COPS7A-221ENST00000546229 DANCRP0C864 163 aa11.2□□□□□ -0.62
COPS7A-221ENST00000546229 GABRA3P34903 492 aa11.2□□□□□ -0.62
COPS7A-221ENST00000546229 EIF1AXP47813 144 aaKnown RBP11.2□□□□□ -0.62
COPS7A-221ENST00000546229 KCNJ5P48544 419 aa11.2□□□□□ -0.62
COPS7A-221ENST00000546229 SLC18A2Q05940 514 aa11.2□□□□□ -0.62
COPS7A-221ENST00000546229 SLC29A2Q14542 456 aa11.2□□□□□ -0.62
COPS7A-221ENST00000546229 ZNF239Q16600 458 aaKnown RBP11.2□□□□□ -0.62
COPS7A-221ENST00000546229 DUSP5Q16690 384 aa11.2□□□□□ -0.62
COPS7A-221ENST00000546229 EXOC3L2Q2M3D2 409 aa11.2□□□□□ -0.62
COPS7A-221ENST00000546229 GLE1Q53GS7 698 aaKnown RBP11.2□□□□□ -0.62
COPS7A-221ENST00000546229 ANKRD26P1Q6NSI1 321 aa11.2□□□□□ -0.62
COPS7A-221ENST00000546229 TFAP2EQ6VUC0 442 aa11.2□□□□□ -0.62
COPS7A-221ENST00000546229 RNF165Q6ZSG1 346 aa11.2□□□□□ -0.62
COPS7A-221ENST00000546229 SLC16A11Q8NCK7 471 aa11.2□□□□□ -0.62
COPS7A-221ENST00000546229 OR2V1Q8NHB1 315 aa11.2□□□□□ -0.62
COPS7A-221ENST00000546229 CDC26Q8NHZ8 85 aa11.2□□□□□ -0.62
COPS7A-221ENST00000546229 RAB3IL1Q8TBN0 382 aa11.2□□□□□ -0.62
COPS7A-221ENST00000546229 ACTRT2Q8TDY3 377 aa11.2□□□□□ -0.62
COPS7A-221ENST00000546229 IFT81Q8WYA0 676 aa11.2□□□□□ -0.62
COPS7A-221ENST00000546229 SLC9A6Q92581 669 aa11.2□□□□□ -0.62
COPS7A-221ENST00000546229 PLPPR2Q96GM1 343 aa11.2□□□□□ -0.62
COPS7A-221ENST00000546229 RNF145Q96MT1 663 aa11.2□□□□□ -0.62
COPS7A-221ENST00000546229 TBL1XR1Q9BZK7 514 aa11.2□□□□□ -0.62
COPS7A-221ENST00000546229 ACTR6Q9GZN1 396 aa11.2□□□□□ -0.62
COPS7A-221ENST00000546229 TUBB1Q9H4B7 451 aa11.2□□□□□ -0.62
COPS7A-221ENST00000546229 COQ10BQ9H8M1 238 aa11.2□□□□□ -0.62
COPS7A-221ENST00000546229 MIEF1Q9NQG6 463 aa11.2□□□□□ -0.62
COPS7A-221ENST00000546229 ING1Q9UK53 422 aaPredicted RBP11.2□□□□□ -0.62
COPS7A-221ENST00000546229 NFU1Q9UMS0 254 aa11.2□□□□□ -0.62
COPS7A-221ENST00000546229 EMC9Q9Y3B6 208 aa11.2□□□□□ -0.62
COPS7A-221ENST00000546229 ABCA1O95477 2261 aa11.19□□□□□ -0.62
COPS7A-221ENST00000546229 RTTNQ86VV8 2226 aa11.19□□□□□ -0.62
COPS7A-221ENST00000546229 TNFSF11O14788 317 aa11.19□□□□□ -0.62
COPS7A-221ENST00000546229 OIP5O43482 229 aa11.19□□□□□ -0.62
COPS7A-221ENST00000546229 GMFGO60234 142 aa11.19□□□□□ -0.62
COPS7A-221ENST00000546229 CRLF1O75462 422 aa11.19□□□□□ -0.62
COPS7A-221ENST00000546229 KCNK2O95069 426 aa11.19□□□□□ -0.62
COPS7A-221ENST00000546229 NTN1O95631 604 aa11.19□□□□□ -0.62
COPS7A-221ENST00000546229 SOD3P08294 240 aa11.19□□□□□ -0.62
COPS7A-221ENST00000546229 PYGBP11216 843 aa11.19□□□□□ -0.62
COPS7A-221ENST00000546229 SDC1P18827 310 aa11.19□□□□□ -0.62
COPS7A-221ENST00000546229 PRIM2P49643 509 aa11.19□□□□□ -0.62
COPS7A-221ENST00000546229 PSMD4P55036 377 aaKnown RBP11.19□□□□□ -0.62
COPS7A-221ENST00000546229 NR1H2P55055 460 aa11.19□□□□□ -0.62
COPS7A-221ENST00000546229 RAC1P63000 192 aa11.19□□□□□ -0.62
COPS7A-221ENST00000546229 HSPB3Q12988 150 aa11.19□□□□□ -0.62
COPS7A-221ENST00000546229 TNK1Q13470 666 aa11.19□□□□□ -0.62
COPS7A-221ENST00000546229 SPDYAQ5MJ70 313 aa11.19□□□□□ -0.62
COPS7A-221ENST00000546229 Q6ZSR9 355 aa11.19□□□□□ -0.62
COPS7A-221ENST00000546229 ESPNLQ6ZVH7 1005 aa11.19□□□□□ -0.62
COPS7A-221ENST00000546229 FBXO30Q8TB52 745 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms