RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 GPR83Q9NYM4 423 aa14.72□□□□□ -0.05
PRPF40A-212ENST00000545856 STMN3Q9NZ72 180 aa14.72□□□□□ -0.05
PRPF40A-212ENST00000545856 GMPR2Q9P2T1 348 aaKnown RBP14.72□□□□□ -0.05
PRPF40A-212ENST00000545856 ANAPC2Q9UJX6 822 aa14.72□□□□□ -0.05
PRPF40A-212ENST00000545856 ZNF443Q9Y2A4 671 aaPredicted RBP14.72□□□□□ -0.05
PRPF40A-212ENST00000545856 PCDHGB6Q9Y5F9 930 aa14.72□□□□□ -0.05
PRPF40A-212ENST00000545856 MED19A0JLT2 244 aaPredicted RBP14.71□□□□□ -0.06
PRPF40A-212ENST00000545856 CDHR4A6H8M9 788 aa14.71□□□□□ -0.06
PRPF40A-212ENST00000545856 SERINC4A6NH21 518 aa14.71□□□□□ -0.06
PRPF40A-212ENST00000545856 FADS1O60427 444 aa14.71□□□□□ -0.06
PRPF40A-212ENST00000545856 EIF4E2O60573 245 aaKnown RBP14.71□□□□□ -0.06
PRPF40A-212ENST00000545856 FMO6PO60774 539 aa14.71□□□□□ -0.06
PRPF40A-212ENST00000545856 FCGR1AP12314 374 aa14.71□□□□□ -0.06
PRPF40A-212ENST00000545856 ITGA2P17301 1181 aa14.71□□□□□ -0.06
PRPF40A-212ENST00000545856 CD247P20963 164 aa14.71□□□□□ -0.06
PRPF40A-212ENST00000545856 EVI2BP34910 448 aa14.71□□□□□ -0.06
PRPF40A-212ENST00000545856 MSX2P35548 267 aaPredicted RBP14.71□□□□□ -0.06
PRPF40A-212ENST00000545856 CRYBA2P53672 197 aa14.71□□□□□ -0.06
PRPF40A-212ENST00000545856 SUMO3P55854 103 aaPredicted RBP14.71□□□□□ -0.06
PRPF40A-212ENST00000545856 KCNJ10P78508 379 aa14.71□□□□□ -0.06
PRPF40A-212ENST00000545856 CHRNB3Q05901 458 aa14.71□□□□□ -0.06
PRPF40A-212ENST00000545856 GK3PQ14409 553 aa14.71□□□□□ -0.06
PRPF40A-212ENST00000545856 DEFB109BQ30KR1 87 aa14.71□□□□□ -0.06
PRPF40A-212ENST00000545856 IFI44LQ53G44 452 aa14.71□□□□□ -0.06
PRPF40A-212ENST00000545856 RPS26P11Q5JNZ5 115 aaPredicted RBP14.71□□□□□ -0.06
PRPF40A-212ENST00000545856 ATP1A1-AS1Q5TC04 95 aa14.71□□□□□ -0.06
PRPF40A-212ENST00000545856 BORAQ6PGQ7 559 aa14.71□□□□□ -0.06
PRPF40A-212ENST00000545856 CYP2R1Q6VVX0 501 aa14.71□□□□□ -0.06
PRPF40A-212ENST00000545856 SPPL2CQ8IUH8 684 aa14.71□□□□□ -0.06
PRPF40A-212ENST00000545856 CYP4Z2PQ8N1L4 340 aa14.71□□□□□ -0.06
PRPF40A-212ENST00000545856 SIRT6Q8N6T7 355 aa14.71□□□□□ -0.06
PRPF40A-212ENST00000545856 FAM71CQ8NEG0 241 aa14.71□□□□□ -0.06
PRPF40A-212ENST00000545856 HAS2Q92819 552 aa14.71□□□□□ -0.06
PRPF40A-212ENST00000545856 STMN2Q93045 179 aa14.71□□□□□ -0.06
PRPF40A-212ENST00000545856 RSRC1Q96IZ7 334 aaKnown RBP14.71□□□□□ -0.06
PRPF40A-212ENST00000545856 TBL1XR1Q9BZK7 514 aa14.71□□□□□ -0.06
PRPF40A-212ENST00000545856 SH2D2AQ9NP31 389 aa14.71□□□□□ -0.06
PRPF40A-212ENST00000545856 TIMMDC1Q9NPL8 285 aa14.71□□□□□ -0.06
PRPF40A-212ENST00000545856 CCM2LQ9NUG4 571 aaPredicted RBP14.71□□□□□ -0.06
PRPF40A-212ENST00000545856 FRYQ5TBA9 3013 aa14.7□□□□□ -0.06
PRPF40A-212ENST00000545856 TPRP12270 2363 aaKnown RBP14.7□□□□□ -0.06
PRPF40A-212ENST00000545856 DMXL2Q8TDJ6 3036 aa14.7□□□□□ -0.06
PRPF40A-212ENST00000545856 PRAMEF25A6NGN4 478 aa14.7□□□□□ -0.06
PRPF40A-212ENST00000545856 FAAHO00519 579 aa14.7□□□□□ -0.06
PRPF40A-212ENST00000545856 ICOSLGO75144 302 aa14.7□□□□□ -0.06
PRPF40A-212ENST00000545856 DNAJB5O75953 348 aa14.7□□□□□ -0.06
PRPF40A-212ENST00000545856 SORBS2O94875 1100 aaKnown RBP14.7□□□□□ -0.06
PRPF40A-212ENST00000545856 ZNF682O95780 498 aa14.7□□□□□ -0.06
PRPF40A-212ENST00000545856 LGI1O95970 557 aa14.7□□□□□ -0.06
PRPF40A-212ENST00000545856 FESP07332 822 aa14.7□□□□□ -0.06
PRPF40A-212ENST00000545856 RAP2AP10114 183 aa14.7□□□□□ -0.06
PRPF40A-212ENST00000545856 UQCRBP14927 111 aa14.7□□□□□ -0.06
PRPF40A-212ENST00000545856 MSX1P28360 303 aa14.7□□□□□ -0.06
PRPF40A-212ENST00000545856 SLC7A1P30825 629 aa14.7□□□□□ -0.06
PRPF40A-212ENST00000545856 MAGEA2P43356 314 aa14.7□□□□□ -0.06
PRPF40A-212ENST00000545856 RFX3P48380 749 aa14.7□□□□□ -0.06
PRPF40A-212ENST00000545856 EEF1A1P68104 462 aaKnown RBP14.7□□□□□ -0.06
PRPF40A-212ENST00000545856 DMTNQ08495 405 aa14.7□□□□□ -0.06
PRPF40A-212ENST00000545856 KPNB1Q14974 876 aaKnown RBP14.7□□□□□ -0.06
PRPF40A-212ENST00000545856 GRAMD1BQ3KR37 738 aa14.7□□□□□ -0.06
PRPF40A-212ENST00000545856 PDZK1Q5T2W1 519 aa14.7□□□□□ -0.06
PRPF40A-212ENST00000545856 SLC22A10Q63ZE4 541 aa14.7□□□□□ -0.06
PRPF40A-212ENST00000545856 FKBP9P1Q75LS8 142 aa14.7□□□□□ -0.06
PRPF40A-212ENST00000545856 ZNF550Q7Z398 422 aa14.7□□□□□ -0.06
PRPF40A-212ENST00000545856 PIWIL3Q7Z3Z3 882 aaKnown RBP14.7□□□□□ -0.06
PRPF40A-212ENST00000545856 POGLUT1Q8NBL1 392 aa14.7□□□□□ -0.06
PRPF40A-212ENST00000545856 PAPD5Q8NDF8 572 aaKnown RBP14.7□□□□□ -0.06
PRPF40A-212ENST00000545856 FRMD6Q96NE9 622 aa14.7□□□□□ -0.06
PRPF40A-212ENST00000545856 SMAD5Q99717 465 aaKnown RBP14.7□□□□□ -0.06
PRPF40A-212ENST00000545856 ZNF552Q9H707 407 aaPredicted RBP14.7□□□□□ -0.06
PRPF40A-212ENST00000545856 ZBTB20Q9HC78 741 aaPredicted RBP14.7□□□□□ -0.06
PRPF40A-212ENST00000545856 ARMC1Q9NVT9 282 aa14.7□□□□□ -0.06
PRPF40A-212ENST00000545856 FBXO34Q9NWN3 711 aa14.7□□□□□ -0.06
PRPF40A-212ENST00000545856 RAXQ9Y2V3 346 aa14.7□□□□□ -0.06
PRPF40A-212ENST00000545856 CHCHD2Q9Y6H1 151 aaPredicted RBP14.7□□□□□ -0.06
PRPF40A-212ENST00000545856 IGLV3-32A0A0A0MS00 114 aa14.69□□□□□ -0.06
PRPF40A-212ENST00000545856 OR5H15A6NDH6 313 aa14.69□□□□□ -0.06
PRPF40A-212ENST00000545856 C1QTNF9BB2RNN3 333 aa14.69□□□□□ -0.06
PRPF40A-212ENST00000545856 DPM1O60762 260 aa14.69□□□□□ -0.06
PRPF40A-212ENST00000545856 ZNF354AO60765 605 aaPredicted RBP14.69□□□□□ -0.06
PRPF40A-212ENST00000545856 OR6B1O95007 311 aa14.69□□□□□ -0.06
PRPF40A-212ENST00000545856 SNX4O95219 450 aa14.69□□□□□ -0.06
PRPF40A-212ENST00000545856 IFNW1P05000 195 aa14.69□□□□□ -0.06
PRPF40A-212ENST00000545856 C1QTNF9P0C862 333 aa14.69□□□□□ -0.06
PRPF40A-212ENST00000545856 IFNA8P32881 189 aa14.69□□□□□ -0.06
PRPF40A-212ENST00000545856 SLC6A8P48029 635 aa14.69□□□□□ -0.06
PRPF40A-212ENST00000545856 C17orf67Q0P5P2 114 aa14.69□□□□□ -0.06
PRPF40A-212ENST00000545856 CCNIQ14094 377 aa14.69□□□□□ -0.06
PRPF40A-212ENST00000545856 NRF1Q16656 503 aa14.69□□□□□ -0.06
PRPF40A-212ENST00000545856 FNDC7Q5VTL7 733 aa14.69□□□□□ -0.06
PRPF40A-212ENST00000545856 IGFL3Q6UXB1 125 aa14.69□□□□□ -0.06
PRPF40A-212ENST00000545856 ZNF836Q6ZNA1 936 aa14.69□□□□□ -0.06
PRPF40A-212ENST00000545856 ZAR1Q86SH2 424 aa14.69□□□□□ -0.06
PRPF40A-212ENST00000545856 PRR22Q8IZ63 422 aa14.69□□□□□ -0.06
PRPF40A-212ENST00000545856 ADGRG5Q8IZF4 528 aa14.69□□□□□ -0.06
PRPF40A-212ENST00000545856 BEST3Q8N1M1 668 aa14.69□□□□□ -0.06
PRPF40A-212ENST00000545856 OR4C3Q8NH37 302 aa14.69□□□□□ -0.06
PRPF40A-212ENST00000545856 NTNG2Q96CW9 530 aa14.69□□□□□ -0.06
PRPF40A-212ENST00000545856 HSH2DQ96JZ2 352 aa14.69□□□□□ -0.06
PRPF40A-212ENST00000545856 DCBLD2Q96PD2 775 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms