RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	RNASE6	Q93091	150 aa	Known RBP	12.12	□□□□□ -0.47
POLE-222	ENST00000545015	LRRC46	Q96FV0	321 aa		12.12	□□□□□ -0.47
POLE-222	ENST00000545015	PIGQ	Q9BRB3	760 aa		12.12	□□□□□ -0.47
POLE-222	ENST00000545015	SFXN3	Q9BWM7	321 aa		12.12	□□□□□ -0.47
POLE-222	ENST00000545015	ACBD3	Q9H3P7	528 aa		12.12	□□□□□ -0.47
POLE-222	ENST00000545015	TMBIM4	Q9HC24	238 aa		12.12	□□□□□ -0.47
POLE-222	ENST00000545015	THAP1	Q9NVV9	213 aa		12.12	□□□□□ -0.47
POLE-222	ENST00000545015	INTS1	Q8N201	2190 aa	Known RBP	12.12	□□□□□ -0.47
POLE-222	ENST00000545015	MED12	Q93074	2177 aa		12.11	□□□□□ -0.47
POLE-222	ENST00000545015	OR2M5	A3KFT3	312 aa		12.11	□□□□□ -0.47
POLE-222	ENST00000545015	TNFRSF21	O75509	655 aa		12.11	□□□□□ -0.47
POLE-222	ENST00000545015	CRH	P06850	196 aa		12.11	□□□□□ -0.47
POLE-222	ENST00000545015	ZNF17	P17021	662 aa		12.11	□□□□□ -0.47
POLE-222	ENST00000545015	LBP	P18428	481 aa		12.11	□□□□□ -0.47
POLE-222	ENST00000545015	BMP5	P22003	454 aa		12.11	□□□□□ -0.47
POLE-222	ENST00000545015	PCYT1A	P49585	367 aa		12.11	□□□□□ -0.47
POLE-222	ENST00000545015	CLDN15	P56746	228 aa		12.11	□□□□□ -0.47
POLE-222	ENST00000545015	EEFSEC	P57772	596 aa	Known RBP	12.11	□□□□□ -0.47
POLE-222	ENST00000545015	DPY19L1	Q2PZI1	675 aa		12.11	□□□□□ -0.47
POLE-222	ENST00000545015	HHAT	Q5VTY9	493 aa		12.11	□□□□□ -0.47
POLE-222	ENST00000545015	FIGNL1	Q6PIW4	674 aa		12.11	□□□□□ -0.47
POLE-222	ENST00000545015	ARSK	Q6UWY0	536 aa		12.11	□□□□□ -0.47
POLE-222	ENST00000545015	SZRD1	Q7Z422	152 aa		12.11	□□□□□ -0.47
POLE-222	ENST00000545015	MTERF4	Q7Z6M4	381 aa	Known RBP	12.11	□□□□□ -0.47
POLE-222	ENST00000545015	FBXO30	Q8TB52	745 aa		12.11	□□□□□ -0.47
POLE-222	ENST00000545015	MIPOL1	Q8TD10	442 aa		12.11	□□□□□ -0.47
POLE-222	ENST00000545015	HOXD1	Q9GZZ0	328 aa		12.11	□□□□□ -0.47
POLE-222	ENST00000545015	FBXO34	Q9NWN3	711 aa		12.11	□□□□□ -0.47
POLE-222	ENST00000545015	RPH3A	Q9Y2J0	694 aa	Predicted RBP	12.11	□□□□□ -0.47
POLE-222	ENST00000545015	SNX8	Q9Y5X2	465 aa		12.11	□□□□□ -0.47
POLE-222	ENST00000545015	AP4B1	Q9Y6B7	739 aa		12.11	□□□□□ -0.47
POLE-222	ENST00000545015	FAM221A	A4D161	298 aa		12.1	□□□□□ -0.47
POLE-222	ENST00000545015	NPIPB9	F8W1W9	429 aa		12.1	□□□□□ -0.47
POLE-222	ENST00000545015	NDUFB5	O43674	189 aa		12.1	□□□□□ -0.47
POLE-222	ENST00000545015	GUSB	P08236	651 aa		12.1	□□□□□ -0.47
POLE-222	ENST00000545015	TMIGD3	P0DMS9	266 aa	Predicted RBP	12.1	□□□□□ -0.47
POLE-222	ENST00000545015	RFX3	P48380	749 aa		12.1	□□□□□ -0.47
POLE-222	ENST00000545015	MAGOH	P61326	146 aa	Known RBP	12.1	□□□□□ -0.47
POLE-222	ENST00000545015	SORD	Q00796	357 aa		12.1	□□□□□ -0.47
POLE-222	ENST00000545015	SRY	Q05066	204 aa		12.1	□□□□□ -0.47
POLE-222	ENST00000545015	STX5	Q13190	355 aa		12.1	□□□□□ -0.47
POLE-222	ENST00000545015	KLHL26	Q53HC5	615 aa		12.1	□□□□□ -0.47
POLE-222	ENST00000545015	RAET1L	Q5VY80	246 aa		12.1	□□□□□ -0.47
POLE-222	ENST00000545015	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	12.1	□□□□□ -0.47
POLE-222	ENST00000545015	MEIOB	Q8N635	442 aa		12.1	□□□□□ -0.47
POLE-222	ENST00000545015	METTL25	Q8N6Q8	603 aa		12.1	□□□□□ -0.47
POLE-222	ENST00000545015	ANKRD42	Q8N9B4	389 aa		12.1	□□□□□ -0.47
POLE-222	ENST00000545015	CHDH	Q8NE62	594 aa	Predicted RBP	12.1	□□□□□ -0.47
POLE-222	ENST00000545015	ADAMTS15	Q8TE58	950 aa		12.1	□□□□□ -0.47
POLE-222	ENST00000545015	CDS1	Q92903	461 aa		12.1	□□□□□ -0.47
POLE-222	ENST00000545015	YIPF4	Q9BSR8	244 aa		12.1	□□□□□ -0.47
POLE-222	ENST00000545015	NUF2	Q9BZD4	464 aa		12.1	□□□□□ -0.47
POLE-222	ENST00000545015	DPY30	Q9C005	99 aa		12.1	□□□□□ -0.47
POLE-222	ENST00000545015	PNPO	Q9NVS9	261 aa		12.1	□□□□□ -0.47
POLE-222	ENST00000545015	FAF1	Q9UNN5	650 aa	Predicted RBP	12.1	□□□□□ -0.47
POLE-222	ENST00000545015	ZNF337	Q9Y3M9	751 aa		12.1	□□□□□ -0.47
POLE-222	ENST00000545015	ZNF175	Q9Y473	711 aa		12.1	□□□□□ -0.47
POLE-222	ENST00000545015	TACC2	O95359	2948 aa		12.09	□□□□□ -0.47
POLE-222	ENST00000545015	PRSS51	A0A1B0GVH4	220 aa		12.09	□□□□□ -0.47
POLE-222	ENST00000545015	DUXA	A6NLW8	204 aa		12.09	□□□□□ -0.47
POLE-222	ENST00000545015	SLCO1B7	G3V0H7	640 aa		12.09	□□□□□ -0.47
POLE-222	ENST00000545015	SCD	O00767	359 aa		12.09	□□□□□ -0.47
POLE-222	ENST00000545015	SDHD	O14521	159 aa		12.09	□□□□□ -0.47
POLE-222	ENST00000545015	KLF11	O14901	512 aa		12.09	□□□□□ -0.47
POLE-222	ENST00000545015	HDAC3	O15379	428 aa		12.09	□□□□□ -0.47
POLE-222	ENST00000545015	AK1	P00568	194 aa		12.09	□□□□□ -0.47
POLE-222	ENST00000545015	POU3F2	P20265	443 aa	Predicted RBP	12.09	□□□□□ -0.47
POLE-222	ENST00000545015	PSMA4	P25789	261 aa	Known RBP	12.09	□□□□□ -0.47
POLE-222	ENST00000545015	DGKQ	P52824	942 aa		12.09	□□□□□ -0.47
POLE-222	ENST00000545015	CLNS1A	P54105	237 aa	Known RBP	12.09	□□□□□ -0.47
POLE-222	ENST00000545015	KRTAP10-9	P60411	292 aa		12.09	□□□□□ -0.47
POLE-222	ENST00000545015	PHC1	P78364	1004 aa		12.09	□□□□□ -0.47
POLE-222	ENST00000545015	TP53BP2	Q13625	1128 aa		12.09	□□□□□ -0.47
POLE-222	ENST00000545015	SPDYE7P	Q495Y7	208 aa		12.09	□□□□□ -0.47
POLE-222	ENST00000545015	DCST2	Q5T1A1	773 aa		12.09	□□□□□ -0.47
POLE-222	ENST00000545015	CCNJ	Q5T5M9	372 aa		12.09	□□□□□ -0.47
POLE-222	ENST00000545015	ANXA8L1	Q5VT79	327 aa		12.09	□□□□□ -0.47
POLE-222	ENST00000545015	ATG16L1	Q676U5	607 aa		12.09	□□□□□ -0.47
POLE-222	ENST00000545015	OR4F3	Q6IEY1	312 aa		12.09	□□□□□ -0.47
POLE-222	ENST00000545015	OR2A2	Q6IF42	318 aa		12.09	□□□□□ -0.47
POLE-222	ENST00000545015	SPATA19	Q7Z5L4	167 aa		12.09	□□□□□ -0.47
POLE-222	ENST00000545015	VPS37A	Q8NEZ2	397 aa		12.09	□□□□□ -0.47
POLE-222	ENST00000545015	OIT3	Q8WWZ8	545 aa		12.09	□□□□□ -0.47
POLE-222	ENST00000545015	JADE3	Q92613	823 aa		12.09	□□□□□ -0.47
POLE-222	ENST00000545015	ZBTB8A	Q96BR9	441 aa		12.09	□□□□□ -0.47
POLE-222	ENST00000545015	MAEL	Q96JY0	434 aa	Known RBP	12.09	□□□□□ -0.47
POLE-222	ENST00000545015	OR7D2	Q96RA2	312 aa		12.09	□□□□□ -0.47
POLE-222	ENST00000545015	PAIP2	Q9BPZ3	127 aa	Known RBP	12.09	□□□□□ -0.47
POLE-222	ENST00000545015	ZNF559	Q9BR84	538 aa		12.09	□□□□□ -0.47
POLE-222	ENST00000545015	PIGM	Q9H3S5	423 aa		12.09	□□□□□ -0.47
POLE-222	ENST00000545015	KCNE3	Q9Y6H6	103 aa		12.09	□□□□□ -0.47
POLE-222	ENST00000545015	ANKHD1	Q8IWZ3	2542 aa	Known RBP	12.09	□□□□□ -0.47
POLE-222	ENST00000545015	OTOG	Q6ZRI0	2925 aa		12.09	□□□□□ -0.47
POLE-222	ENST00000545015	CSMD2	Q7Z408	3487 aa		12.09	□□□□□ -0.47
POLE-222	ENST00000545015	KIAA1549	Q9HCM3	1950 aa		12.09	□□□□□ -0.47
POLE-222	ENST00000545015	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		12.08	□□□□□ -0.48
POLE-222	ENST00000545015	TRPC5OS	A6NMA1	111 aa		12.08	□□□□□ -0.48
POLE-222	ENST00000545015	CFLAR	O15519	480 aa		12.08	□□□□□ -0.48
POLE-222	ENST00000545015	TNFSF13	O75888	250 aa		12.08	□□□□□ -0.48
POLE-222	ENST00000545015	TGM6	O95932	706 aa		12.08	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms