RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 C6orf47O95873 294 aa11.82□□□□□ -0.52
TNFRSF1A-215ENST00000543359 ALOX5P09917 674 aa11.82□□□□□ -0.52
TNFRSF1A-215ENST00000543359 PSMA4P25789 261 aaKnown RBP11.82□□□□□ -0.52
TNFRSF1A-215ENST00000543359 LCN1P31025 176 aa11.82□□□□□ -0.52
TNFRSF1A-215ENST00000543359 PEX19P40855 299 aa11.82□□□□□ -0.52
TNFRSF1A-215ENST00000543359 CCT3P49368 545 aaKnown RBP11.82□□□□□ -0.52
TNFRSF1A-215ENST00000543359 CLK3P49761 638 aaKnown RBP11.82□□□□□ -0.52
TNFRSF1A-215ENST00000543359 DGKQP52824 942 aa11.82□□□□□ -0.52
TNFRSF1A-215ENST00000543359 CLDN8P56748 225 aa11.82□□□□□ -0.52
TNFRSF1A-215ENST00000543359 LASP1Q14847 261 aaKnown RBP11.82□□□□□ -0.52
TNFRSF1A-215ENST00000543359 DAZAP2Q15038 168 aaPredicted RBP11.82□□□□□ -0.52
TNFRSF1A-215ENST00000543359 CEP85LQ5SZL2 805 aa11.82□□□□□ -0.52
TNFRSF1A-215ENST00000543359 CCNJQ5T5M9 372 aa11.82□□□□□ -0.52
TNFRSF1A-215ENST00000543359 RAET1LQ5VY80 246 aa11.82□□□□□ -0.52
TNFRSF1A-215ENST00000543359 NATD1Q8N6N6 113 aa11.82□□□□□ -0.52
TNFRSF1A-215ENST00000543359 GOT1L1Q8NHS2 421 aaPredicted RBP11.82□□□□□ -0.52
TNFRSF1A-215ENST00000543359 FAM222BQ8WU58 562 aa11.82□□□□□ -0.52
TNFRSF1A-215ENST00000543359 NRGNQ92686 78 aa11.82□□□□□ -0.52
TNFRSF1A-215ENST00000543359 STARD4Q96DR4 205 aa11.82□□□□□ -0.52
TNFRSF1A-215ENST00000543359 DTNBP1Q96EV8 351 aa11.82□□□□□ -0.52
TNFRSF1A-215ENST00000543359 TBL1XR1Q9BZK7 514 aa11.82□□□□□ -0.52
TNFRSF1A-215ENST00000543359 BHLHE41Q9C0J9 482 aaPredicted RBP11.82□□□□□ -0.52
TNFRSF1A-215ENST00000543359 PIGUQ9H490 435 aa11.82□□□□□ -0.52
TNFRSF1A-215ENST00000543359 PTGES2Q9H7Z7 377 aa11.82□□□□□ -0.52
TNFRSF1A-215ENST00000543359 ZCCHC3Q9NUD5 404 aaKnown RBP11.82□□□□□ -0.52
TNFRSF1A-215ENST00000543359 EIF3LQ9Y262 564 aaKnown RBP11.82□□□□□ -0.52
TNFRSF1A-215ENST00000543359 RAP2CQ9Y3L5 183 aa11.82□□□□□ -0.52
TNFRSF1A-215ENST00000543359 KCNE3Q9Y6H6 103 aa11.82□□□□□ -0.52
TNFRSF1A-215ENST00000543359 MED13LQ71F56 2210 aa11.82□□□□□ -0.52
TNFRSF1A-215ENST00000543359 FLNAP21333 2647 aaKnown RBP11.81□□□□□ -0.52
TNFRSF1A-215ENST00000543359 A0A1W2PNV4 684 aa11.81□□□□□ -0.52
TNFRSF1A-215ENST00000543359 A8MXE2 369 aa11.81□□□□□ -0.52
TNFRSF1A-215ENST00000543359 NPIPB9F8W1W9 429 aa11.81□□□□□ -0.52
TNFRSF1A-215ENST00000543359 ANKRD28O15084 1053 aa11.81□□□□□ -0.52
TNFRSF1A-215ENST00000543359 SCN2BO60939 215 aa11.81□□□□□ -0.52
TNFRSF1A-215ENST00000543359 ZWINTO95229 277 aa11.81□□□□□ -0.52
TNFRSF1A-215ENST00000543359 DDX5P17844 614 aaKnown RBP11.81□□□□□ -0.52
TNFRSF1A-215ENST00000543359 BGNP21810 368 aa11.81□□□□□ -0.52
TNFRSF1A-215ENST00000543359 SLC1A6P48664 564 aa11.81□□□□□ -0.52
TNFRSF1A-215ENST00000543359 PRIM2P49643 509 aa11.81□□□□□ -0.52
TNFRSF1A-215ENST00000543359 RPL14P50914 215 aaKnown RBP11.81□□□□□ -0.52
TNFRSF1A-215ENST00000543359 WDR4P57081 412 aaKnown RBP11.81□□□□□ -0.52
TNFRSF1A-215ENST00000543359 HBA1P69905 142 aa11.81□□□□□ -0.52
TNFRSF1A-215ENST00000543359 PHC1P78364 1004 aa11.81□□□□□ -0.52
TNFRSF1A-215ENST00000543359 OCRLQ01968 901 aa11.81□□□□□ -0.52
TNFRSF1A-215ENST00000543359 GUSBP1Q15486 140 aa11.81□□□□□ -0.52
TNFRSF1A-215ENST00000543359 CD226Q15762 336 aa11.81□□□□□ -0.52
TNFRSF1A-215ENST00000543359 PDCD2Q16342 344 aaPredicted RBP11.81□□□□□ -0.52
TNFRSF1A-215ENST00000543359 FLYWCH1Q4VC44 716 aa11.81□□□□□ -0.52
TNFRSF1A-215ENST00000543359 CDC73Q6P1J9 531 aa11.81□□□□□ -0.52
TNFRSF1A-215ENST00000543359 SZRD1Q7Z422 152 aa11.81□□□□□ -0.52
TNFRSF1A-215ENST00000543359 GGNQ86UU5 652 aa11.81□□□□□ -0.52
TNFRSF1A-215ENST00000543359 GCNT2Q8N0V5 402 aa11.81□□□□□ -0.52
TNFRSF1A-215ENST00000543359 COX18Q8N8Q8 333 aa11.81□□□□□ -0.52
TNFRSF1A-215ENST00000543359 SFXN5Q8TD22 340 aa11.81□□□□□ -0.52
TNFRSF1A-215ENST00000543359 FIG4Q92562 907 aa11.81□□□□□ -0.52
TNFRSF1A-215ENST00000543359 CDS1Q92903 461 aa11.81□□□□□ -0.52
TNFRSF1A-215ENST00000543359 ZNF845Q96IR2 970 aaPredicted RBP11.81□□□□□ -0.52
TNFRSF1A-215ENST00000543359 PIGQQ9BRB3 760 aa11.81□□□□□ -0.52
TNFRSF1A-215ENST00000543359 DUSP26Q9BV47 211 aa11.81□□□□□ -0.52
TNFRSF1A-215ENST00000543359 ACTRT3Q9BYD9 372 aa11.81□□□□□ -0.52
TNFRSF1A-215ENST00000543359 SERHL2Q9H4I8 314 aa11.81□□□□□ -0.52
TNFRSF1A-215ENST00000543359 UBQLN4Q9NRR5 601 aa11.81□□□□□ -0.52
TNFRSF1A-215ENST00000543359 RASSF1Q9NS23 344 aa11.81□□□□□ -0.52
TNFRSF1A-215ENST00000543359 ATAD3AQ9NVI7 634 aa11.81□□□□□ -0.52
TNFRSF1A-215ENST00000543359 SNX8Q9Y5X2 465 aa11.81□□□□□ -0.52
TNFRSF1A-215ENST00000543359 AP4B1Q9Y6B7 739 aa11.81□□□□□ -0.52
TNFRSF1A-215ENST00000543359 PRRC2AP48634 2157 aaKnown RBP11.81□□□□□ -0.52
TNFRSF1A-215ENST00000543359 A0A087WZY1 265 aa11.8□□□□□ -0.52
TNFRSF1A-215ENST00000543359 A0A1W2PQD3 144 aa11.8□□□□□ -0.52
TNFRSF1A-215ENST00000543359 C7orf72A4D263 438 aa11.8□□□□□ -0.52
TNFRSF1A-215ENST00000543359 A6NNC1 897 aa11.8□□□□□ -0.52
TNFRSF1A-215ENST00000543359 OIP5O43482 229 aa11.8□□□□□ -0.52
TNFRSF1A-215ENST00000543359 NDUFB5O43674 189 aa11.8□□□□□ -0.52
TNFRSF1A-215ENST00000543359 TNFRSF21O75509 655 aa11.8□□□□□ -0.52
TNFRSF1A-215ENST00000543359 SNUPNO95149 360 aaKnown RBP11.8□□□□□ -0.52
TNFRSF1A-215ENST00000543359 CRHP06850 196 aa11.8□□□□□ -0.52
TNFRSF1A-215ENST00000543359 TUBBP07437 444 aa11.8□□□□□ -0.52
TNFRSF1A-215ENST00000543359 MYZAPP0CAP1 466 aa11.8□□□□□ -0.52
TNFRSF1A-215ENST00000543359 EPXP11678 715 aa11.8□□□□□ -0.52
TNFRSF1A-215ENST00000543359 DNAJA1P31689 397 aaKnown RBP11.8□□□□□ -0.52
TNFRSF1A-215ENST00000543359 KIR2DL2P43627 348 aaPredicted RBP11.8□□□□□ -0.52
TNFRSF1A-215ENST00000543359 POU6F2P78424 691 aaPredicted RBP11.8□□□□□ -0.52
TNFRSF1A-215ENST00000543359 SORDQ00796 357 aa11.8□□□□□ -0.52
TNFRSF1A-215ENST00000543359 BST1Q10588 318 aa11.8□□□□□ -0.52
TNFRSF1A-215ENST00000543359 LSM12Q3MHD2 195 aaKnown RBP11.8□□□□□ -0.52
TNFRSF1A-215ENST00000543359 KLHL26Q53HC5 615 aa11.8□□□□□ -0.52
TNFRSF1A-215ENST00000543359 SPNS3Q6ZMD2 512 aa11.8□□□□□ -0.52
TNFRSF1A-215ENST00000543359 GRAMD2AQ8IUY3 354 aa11.8□□□□□ -0.52
TNFRSF1A-215ENST00000543359 UBQLNLQ8IYU4 475 aa11.8□□□□□ -0.52
TNFRSF1A-215ENST00000543359 GTPBP8Q8N3Z3 284 aaPredicted RBP11.8□□□□□ -0.52
TNFRSF1A-215ENST00000543359 METTL25Q8N6Q8 603 aa11.8□□□□□ -0.52
TNFRSF1A-215ENST00000543359 OR8J2Q8NGG1 315 aa11.8□□□□□ -0.52
TNFRSF1A-215ENST00000543359 OR56A1Q8NGH5 318 aa11.8□□□□□ -0.52
TNFRSF1A-215ENST00000543359 PPP1R14CQ8TAE6 165 aa11.8□□□□□ -0.52
TNFRSF1A-215ENST00000543359 LINC01560Q8TB33 94 aa11.8□□□□□ -0.52
TNFRSF1A-215ENST00000543359 POC1BQ8TC44 478 aa11.8□□□□□ -0.52
TNFRSF1A-215ENST00000543359 ACTRT2Q8TDY3 377 aa11.8□□□□□ -0.52
TNFRSF1A-215ENST00000543359 LRRC46Q96FV0 321 aa11.8□□□□□ -0.52
TNFRSF1A-215ENST00000543359 ADGRG7Q96K78 797 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms