RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 NME5P56597 212 aa11.89□□□□□ -0.51
LTBR-208ENST00000541005 RPS26P62854 115 aaKnown RBP11.89□□□□□ -0.51
LTBR-208ENST00000541005 PMPCAQ10713 525 aa11.89□□□□□ -0.51
LTBR-208ENST00000541005 STX5Q13190 355 aa11.89□□□□□ -0.51
LTBR-208ENST00000541005 SF3B4Q15427 424 aaKnown RBP eCLIP11.89□□□□□ -0.512e-10■■■■■ 32.9
LTBR-208ENST00000541005 GLYR1Q49A26 553 aaPredicted RBP11.89□□□□□ -0.51
LTBR-208ENST00000541005 CCNJQ5T5M9 372 aa11.89□□□□□ -0.51
LTBR-208ENST00000541005 RIPPLY2Q5TAB7 128 aa11.89□□□□□ -0.51
LTBR-208ENST00000541005 AP1ARQ63HQ0 302 aa11.89□□□□□ -0.51
LTBR-208ENST00000541005 HEPHL1Q6MZM0 1159 aa11.89□□□□□ -0.51
LTBR-208ENST00000541005 DUSP19Q8WTR2 217 aa11.89□□□□□ -0.51
LTBR-208ENST00000541005 SDCCAG3Q96C92 435 aa11.89□□□□□ -0.51
LTBR-208ENST00000541005 WDYHV1Q96HA8 205 aa11.89□□□□□ -0.51
LTBR-208ENST00000541005 OR52E6Q96RD3 313 aa11.89□□□□□ -0.51
LTBR-208ENST00000541005 CCDC28BQ9BUN5 200 aa11.89□□□□□ -0.51
LTBR-208ENST00000541005 NMUR2Q9GZQ4 415 aa11.89□□□□□ -0.51
LTBR-208ENST00000541005 HOXD1Q9GZZ0 328 aa11.89□□□□□ -0.51
LTBR-208ENST00000541005 DSN1Q9H410 356 aa11.89□□□□□ -0.51
LTBR-208ENST00000541005 PTGES2Q9H7Z7 377 aa11.89□□□□□ -0.51
LTBR-208ENST00000541005 TCF7L2Q9NQB0 619 aa11.89□□□□□ -0.51
LTBR-208ENST00000541005 RNF6Q9Y252 685 aa11.89□□□□□ -0.51
LTBR-208ENST00000541005 KCNE3Q9Y6H6 103 aa11.89□□□□□ -0.51
LTBR-208ENST00000541005 NBPF19A0A087WUL8 3843 aa11.89□□□□□ -0.51
LTBR-208ENST00000541005 CD8B2A6NJW9 211 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 C9JVG2 144 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 LINC01387J3KSC0 135 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 SCDO00767 359 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 POLR3GO15318 223 aaPredicted RBP11.88□□□□□ -0.51
LTBR-208ENST00000541005 NDUFB5O43674 189 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 CPSF4O95639 269 aaKnown RBP11.88□□□□□ -0.51
LTBR-208ENST00000541005 AGR2O95994 175 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 ZNF708P17019 499 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 ATP6V1C1P21283 382 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 MATN1P21941 496 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 MSX1P28360 303 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 HTR1EP28566 365 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 DCTP40126 519 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 IDH3AP50213 366 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 LHX2P50458 406 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 IRX1P78414 480 aaPredicted RBP11.88□□□□□ -0.51
LTBR-208ENST00000541005 TXNL4AP83876 142 aaKnown RBP11.88□□□□□ -0.51
LTBR-208ENST00000541005 BCL2A1Q16548 175 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 TMEM44Q2T9K0 475 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 KLHL26Q53HC5 615 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 HIST2H2BCQ6DN03 193 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 AAGABQ6PD74 315 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 ENPP6Q6UWR7 440 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 SEM1Q6ZVN7 128 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 MTERF4Q7Z6M4 381 aaKnown RBP11.88□□□□□ -0.51
LTBR-208ENST00000541005 ADGRE4PQ86SQ3 457 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 GALNT10Q86SR1 603 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 LACC1Q8IV20 430 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 CLEC4FQ8N1N0 589 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 MIER2Q8N344 545 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 TRIML2Q8N7C3 387 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 ZNF527Q8NB42 609 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 ACBD4Q8NC06 268 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 OR5D16Q8NGK9 328 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 LILRB4Q8NHJ6 448 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 ZPLD1Q8TCW7 415 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 CA5BP1Q8WTZ4 195 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 OIT3Q8WWZ8 545 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 CHMP6Q96FZ7 201 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 MARK4Q96L34 752 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 SFXN2Q96NB2 322 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 UCN2Q96RP3 112 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 SDF2Q99470 211 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 ZNF350Q9GZX5 532 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 CHST11Q9NPF2 352 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 MED11Q9P086 117 aa11.88□□□□□ -0.51
LTBR-208ENST00000541005 A0A087WZY1 265 aa11.87□□□□□ -0.51
LTBR-208ENST00000541005 A0A0G2JNJ9 132 aa11.87□□□□□ -0.51
LTBR-208ENST00000541005 C7orf72A4D263 438 aa11.87□□□□□ -0.51
LTBR-208ENST00000541005 CCDC154A6NI56 674 aa11.87□□□□□ -0.51
LTBR-208ENST00000541005 HPGDP15428 266 aa11.87□□□□□ -0.51
LTBR-208ENST00000541005 ZNF17P17021 662 aa11.87□□□□□ -0.51
LTBR-208ENST00000541005 HK1P19367 917 aa11.87□□□□□ -0.51
LTBR-208ENST00000541005 COL8A1P27658 744 aa11.87□□□□□ -0.51
LTBR-208ENST00000541005 GRNP28799 593 aaKnown RBP11.87□□□□□ -0.51
LTBR-208ENST00000541005 TIMP3P35625 211 aa11.87□□□□□ -0.51
LTBR-208ENST00000541005 ADH7P40394 386 aa11.87□□□□□ -0.51
LTBR-208ENST00000541005 CDKN2CP42773 168 aa11.87□□□□□ -0.51
LTBR-208ENST00000541005 MAGEA8P43361 318 aa11.87□□□□□ -0.51
LTBR-208ENST00000541005 KHKP50053 298 aa11.87□□□□□ -0.51
LTBR-208ENST00000541005 ATP12AP54707 1039 aa11.87□□□□□ -0.51
LTBR-208ENST00000541005 CLDN18P56856 261 aa11.87□□□□□ -0.51
LTBR-208ENST00000541005 CD226Q15762 336 aa11.87□□□□□ -0.51
LTBR-208ENST00000541005 ARHGAP11BQ3KRB8 267 aa11.87□□□□□ -0.51
LTBR-208ENST00000541005 NSUN5P2Q63ZY6 315 aa11.87□□□□□ -0.51
LTBR-208ENST00000541005 OR9I1Q8NGQ6 314 aa11.87□□□□□ -0.51
LTBR-208ENST00000541005 PANX1Q96RD7 426 aa11.87□□□□□ -0.51
LTBR-208ENST00000541005 EBF4Q9BQW3 602 aa11.87□□□□□ -0.51
LTBR-208ENST00000541005 SLC35A5Q9BS91 424 aa11.87□□□□□ -0.51
LTBR-208ENST00000541005 INPP5KQ9BT40 448 aa11.87□□□□□ -0.51
LTBR-208ENST00000541005 OR51I1Q9H343 314 aa11.87□□□□□ -0.51
LTBR-208ENST00000541005 CALHM2Q9HA72 323 aa11.87□□□□□ -0.51
LTBR-208ENST00000541005 POLE3Q9NRF9 147 aa11.87□□□□□ -0.51
LTBR-208ENST00000541005 EXD2Q9NVH0 621 aa11.87□□□□□ -0.51
LTBR-208ENST00000541005 TMEM45AQ9NWC5 275 aa11.87□□□□□ -0.51
LTBR-208ENST00000541005 Q9UFV3 132 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms