RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 SAMD12Q8N8I0 201 aa13.17□□□□□ -0.3
INO80E-203ENST00000540562 OTUB2Q96DC9 234 aa13.17□□□□□ -0.3
INO80E-203ENST00000540562 FN3KQ9H479 309 aa13.17□□□□□ -0.3
INO80E-203ENST00000540562 RNF121Q9H920 327 aa13.17□□□□□ -0.3
INO80E-203ENST00000540562 RPRD1BQ9NQG5 326 aaKnown RBP13.17□□□□□ -0.3
INO80E-203ENST00000540562 PHPT1Q9NRX4 125 aaPredicted RBP13.17□□□□□ -0.3
INO80E-203ENST00000540562 ACSS1Q9NUB1 689 aaPredicted RBP13.17□□□□□ -0.3
INO80E-203ENST00000540562 NLGN3Q9NZ94 848 aa13.17□□□□□ -0.3
INO80E-203ENST00000540562 KIF26AQ9ULI4 1882 aaPredicted RBP13.17□□□□□ -0.3
INO80E-203ENST00000540562 GTPBP1O00178 669 aaKnown RBP13.17□□□□□ -0.3
INO80E-203ENST00000540562 CEACAM5P06731 702 aa13.17□□□□□ -0.3
INO80E-203ENST00000540562 CTSBP07858 339 aa13.17□□□□□ -0.3
INO80E-203ENST00000540562 F3P13726 295 aa13.17□□□□□ -0.3
INO80E-203ENST00000540562 NAA10P41227 235 aaPredicted RBP13.17□□□□□ -0.3
INO80E-203ENST00000540562 GAS1P54826 345 aa13.17□□□□□ -0.3
INO80E-203ENST00000540562 PPP1CAP62136 330 aa13.17□□□□□ -0.3
INO80E-203ENST00000540562 E2F1Q01094 437 aa13.17□□□□□ -0.3
INO80E-203ENST00000540562 ST3GAL3Q11203 375 aa13.17□□□□□ -0.3
INO80E-203ENST00000540562 NDUFAF6Q330K2 333 aa13.17□□□□□ -0.3
INO80E-203ENST00000540562 PUS10Q3MIT2 529 aaKnown RBP13.17□□□□□ -0.3
INO80E-203ENST00000540562 LYPD4Q6UWN0 246 aa13.17□□□□□ -0.3
INO80E-203ENST00000540562 ZNF438Q7Z4V0 828 aa13.17□□□□□ -0.3
INO80E-203ENST00000540562 ZAR1Q86SH2 424 aa13.17□□□□□ -0.3
INO80E-203ENST00000540562 YAF2Q8IY57 180 aa13.17□□□□□ -0.3
INO80E-203ENST00000540562 METTL27Q8N6F8 245 aaPredicted RBP13.17□□□□□ -0.3
INO80E-203ENST00000540562 PIGKQ92643 395 aa13.17□□□□□ -0.3
INO80E-203ENST00000540562 SMARCD2Q92925 531 aa13.17□□□□□ -0.3
INO80E-203ENST00000540562 UPRTQ96BW1 309 aa13.17□□□□□ -0.3
INO80E-203ENST00000540562 KLHL28Q9NXS3 571 aa13.17□□□□□ -0.3
INO80E-203ENST00000540562 NKIRAS2Q9NYR9 191 aa13.17□□□□□ -0.3
INO80E-203ENST00000540562 ZNF624Q9P2J8 865 aaPredicted RBP13.17□□□□□ -0.3
INO80E-203ENST00000540562 PRKAG2Q9UGJ0 569 aa13.17□□□□□ -0.3
INO80E-203ENST00000540562 KIAA1549LQ6ZVL6 1849 aa13.17□□□□□ -0.3
INO80E-203ENST00000540562 MEN1O00255 615 aa13.16□□□□□ -0.3
INO80E-203ENST00000540562 SOX30O94993 753 aa13.16□□□□□ -0.3
INO80E-203ENST00000540562 PCSK2P16519 638 aa13.16□□□□□ -0.3
INO80E-203ENST00000540562 OMPP47874 163 aa13.16□□□□□ -0.3
INO80E-203ENST00000540562 LCN1P1Q5VSP4 162 aa13.16□□□□□ -0.3
INO80E-203ENST00000540562 SLC48A1Q6P1K1 146 aa13.16□□□□□ -0.3
INO80E-203ENST00000540562 THSD4Q6ZMP0 1018 aa13.16□□□□□ -0.3
INO80E-203ENST00000540562 CXXC5Q7LFL8 322 aaKnown RBP13.16□□□□□ -0.3
INO80E-203ENST00000540562 ZNF784Q8NCA9 323 aaPredicted RBP13.16□□□□□ -0.3
INO80E-203ENST00000540562 OR2L5Q8NG80 312 aa13.16□□□□□ -0.3
INO80E-203ENST00000540562 HMGB4Q8WW32 186 aa13.16□□□□□ -0.3
INO80E-203ENST00000540562 SLC7A6Q92536 515 aa13.16□□□□□ -0.3
INO80E-203ENST00000540562 CLIP3Q96DZ5 547 aa13.16□□□□□ -0.3
INO80E-203ENST00000540562 FUZQ9BT04 418 aa13.16□□□□□ -0.3
INO80E-203ENST00000540562 IL23AQ9NPF7 189 aa13.16□□□□□ -0.3
INO80E-203ENST00000540562 ACAD8Q9UKU7 415 aa13.16□□□□□ -0.3
INO80E-203ENST00000540562 ANKRD34BA5PLL1 514 aa13.16□□□□□ -0.3
INO80E-203ENST00000540562 EEF1E1O43324 174 aaKnown RBP13.16□□□□□ -0.3
INO80E-203ENST00000540562 EMC8O43402 210 aa13.16□□□□□ -0.3
INO80E-203ENST00000540562 CLEC3AO75596 197 aa13.16□□□□□ -0.3
INO80E-203ENST00000540562 ELK1P19419 428 aa13.16□□□□□ -0.3
INO80E-203ENST00000540562 MAKP20794 623 aa13.16□□□□□ -0.3
INO80E-203ENST00000540562 MAP2K3P46734 347 aa13.16□□□□□ -0.3
INO80E-203ENST00000540562 RPE65Q16518 533 aa13.16□□□□□ -0.3
INO80E-203ENST00000540562 BCL2A1Q16548 175 aa13.16□□□□□ -0.3
INO80E-203ENST00000540562 TMEM201Q5SNT2 666 aa13.16□□□□□ -0.3
INO80E-203ENST00000540562 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.16□□□□□ -0.3
INO80E-203ENST00000540562 DIO2Q92813 273 aa13.16□□□□□ -0.3
INO80E-203ENST00000540562 SPATA5L1Q9BVQ7 753 aa13.16□□□□□ -0.3
INO80E-203ENST00000540562 TMEM168Q9H0V1 697 aa13.16□□□□□ -0.3
INO80E-203ENST00000540562 OR52D1Q9H346 318 aa13.16□□□□□ -0.3
INO80E-203ENST00000540562 UCKL1Q9NWZ5 548 aa13.16□□□□□ -0.3
INO80E-203ENST00000540562 ZNF346Q9UL40 294 aaKnown RBP13.16□□□□□ -0.3
INO80E-203ENST00000540562 ALAS2P22557 587 aa13.16□□□□□ -0.3
INO80E-203ENST00000540562 EVI2BP34910 448 aa13.16□□□□□ -0.3
INO80E-203ENST00000540562 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.16□□□□□ -0.3
INO80E-203ENST00000540562 TMEM52BQ4KMG9 183 aa13.16□□□□□ -0.3
INO80E-203ENST00000540562 ZNF836Q6ZNA1 936 aa13.16□□□□□ -0.3
INO80E-203ENST00000540562 C17orf47Q8NEP4 570 aa13.16□□□□□ -0.3
INO80E-203ENST00000540562 SLC27A6Q9Y2P4 619 aa13.16□□□□□ -0.3
INO80E-203ENST00000540562 SF3B6Q9Y3B4 125 aaKnown RBP13.16□□□□□ -0.3
INO80E-203ENST00000540562 DAPL1A0PJW8 107 aa13.15□□□□□ -0.3
INO80E-203ENST00000540562 ARRDC5A6NEK1 342 aa13.15□□□□□ -0.3
INO80E-203ENST00000540562 ANKRD61A6NGH8 418 aa13.15□□□□□ -0.3
INO80E-203ENST00000540562 CTSVO60911 334 aa13.15□□□□□ -0.3
INO80E-203ENST00000540562 IL1AP01583 271 aa13.15□□□□□ -0.3
INO80E-203ENST00000540562 IGFALSP35858 605 aa13.15□□□□□ -0.3
INO80E-203ENST00000540562 RAB40BQ12829 278 aa13.15□□□□□ -0.3
INO80E-203ENST00000540562 ZNF155Q12901 538 aaPredicted RBP13.15□□□□□ -0.3
INO80E-203ENST00000540562 RUNX3Q13761 415 aa13.15□□□□□ -0.3
INO80E-203ENST00000540562 ERV3-1Q14264 604 aa13.15□□□□□ -0.3
INO80E-203ENST00000540562 BCL2L15Q5TBC7 163 aa13.15□□□□□ -0.3
INO80E-203ENST00000540562 ADAMTSL4Q6UY14 1074 aa13.15□□□□□ -0.3
INO80E-203ENST00000540562 QSOX2Q6ZRP7 698 aa13.15□□□□□ -0.3
INO80E-203ENST00000540562 GATSQ8NAP1 163 aa13.15□□□□□ -0.3
INO80E-203ENST00000540562 TMEM52Q8NDY8 209 aa13.15□□□□□ -0.3
INO80E-203ENST00000540562 GNPDA2Q8TDQ7 276 aa13.15□□□□□ -0.3
INO80E-203ENST00000540562 ORAI3Q9BRQ5 295 aa13.15□□□□□ -0.3
INO80E-203ENST00000540562 ARHGAP9Q9BRR9 750 aa13.15□□□□□ -0.3
INO80E-203ENST00000540562 RNF32Q9H0A6 362 aa13.15□□□□□ -0.3
INO80E-203ENST00000540562 UBQLN3Q9H347 655 aa13.15□□□□□ -0.3
INO80E-203ENST00000540562 SRMSQ9H3Y6 488 aa13.15□□□□□ -0.3
INO80E-203ENST00000540562 HSPB11Q9Y547 144 aa13.15□□□□□ -0.3
INO80E-203ENST00000540562 PCDHGB2Q9Y5G2 931 aa13.15□□□□□ -0.3
INO80E-203ENST00000540562 CABIN1Q9Y6J0 2220 aa13.15□□□□□ -0.3
INO80E-203ENST00000540562 SURF4O15260 269 aa13.15□□□□□ -0.3
INO80E-203ENST00000540562 PROM1O43490 865 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms