RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 MTHFD2LQ9H903 347 aaPredicted RBP14.17□□□□□ -0.14
DDB1-216ENST00000539739 UBQLN4Q9NRR5 601 aa14.17□□□□□ -0.14
DDB1-216ENST00000539739 CNIH4Q9P003 139 aa14.17□□□□□ -0.14
DDB1-216ENST00000539739 MKLN1Q9UL63 735 aa14.17□□□□□ -0.14
DDB1-216ENST00000539739 PCDHGA10Q9Y5H3 936 aa14.17□□□□□ -0.14
DDB1-216ENST00000539739 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.17□□□□□ -0.14
DDB1-216ENST00000539739 PKD1L2Q7Z442 2459 aa14.17□□□□□ -0.14
DDB1-216ENST00000539739 GSTA4O15217 222 aa14.16□□□□□ -0.14
DDB1-216ENST00000539739 FCMRO60667 390 aa14.16□□□□□ -0.14
DDB1-216ENST00000539739 DPM1O60762 260 aa14.16□□□□□ -0.14
DDB1-216ENST00000539739 ICOSLGO75144 302 aa14.16□□□□□ -0.14
DDB1-216ENST00000539739 SLC25A12O75746 678 aa14.16□□□□□ -0.14
DDB1-216ENST00000539739 P04436 131 aa14.16□□□□□ -0.14
DDB1-216ENST00000539739 HNRNPCP07910 306 aaKnown RBP eCLIP14.16□□□□□ -0.14
DDB1-216ENST00000539739 CD46P15529 392 aa14.16□□□□□ -0.14
DDB1-216ENST00000539739 PCGF2P35227 344 aa14.16□□□□□ -0.14
DDB1-216ENST00000539739 ATP12AP54707 1039 aa14.16□□□□□ -0.14
DDB1-216ENST00000539739 TUBA4AP68366 448 aa14.16□□□□□ -0.14
DDB1-216ENST00000539739 TYW3Q6IPR3 259 aaKnown RBP14.16□□□□□ -0.14
DDB1-216ENST00000539739 MICU2Q8IYU8 434 aa14.16□□□□□ -0.14
DDB1-216ENST00000539739 ZNF619Q8N2I2 560 aa14.16□□□□□ -0.14
DDB1-216ENST00000539739 SPPL2AQ8TCT8 520 aa14.16□□□□□ -0.14
DDB1-216ENST00000539739 PAQR8Q8TEZ7 354 aa14.16□□□□□ -0.14
DDB1-216ENST00000539739 C5orf34Q96MH7 638 aa14.16□□□□□ -0.14
DDB1-216ENST00000539739 SIGLEC12Q96PQ1 595 aa14.16□□□□□ -0.14
DDB1-216ENST00000539739 ZNF607Q96SK3 696 aa14.16□□□□□ -0.14
DDB1-216ENST00000539739 TREX2Q9BQ50 279 aaPredicted RBP14.16□□□□□ -0.14
DDB1-216ENST00000539739 SLC38A1Q9H2H9 487 aa14.16□□□□□ -0.14
DDB1-216ENST00000539739 METTL7AQ9H8H3 244 aa14.16□□□□□ -0.14
DDB1-216ENST00000539739 BCL2L10Q9HD36 194 aa14.16□□□□□ -0.14
DDB1-216ENST00000539739 SACM1LQ9NTJ5 587 aa14.16□□□□□ -0.14
DDB1-216ENST00000539739 CHCHD2Q9Y6H1 151 aaPredicted RBP14.16□□□□□ -0.14
DDB1-216ENST00000539739 CPAMD8Q8IZJ3 1885 aa14.16□□□□□ -0.14
DDB1-216ENST00000539739 TRAV17A0A0B4J275 112 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 PRORSD1PA6NEY8 169 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 ERVH48-1M5A8F1 160 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 SCDO00767 359 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 KIAA0513O60268 411 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 GMNNO75496 209 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 NEURL1O76050 574 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 PGM3O95394 542 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 NGFRP08138 427 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 SFTPCP11686 197 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 HSD17B1P14061 328 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 TBXA2RP21731 343 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 DCTP40126 519 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 TNFSF10P50591 281 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 VEZF1Q14119 521 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 MAPK11Q15759 364 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 GRAMD1BQ3KR37 738 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 TMEM81Q6P7N7 255 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 ASB18Q6ZVZ8 466 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 ZAR1Q86SH2 424 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 KRT73Q86Y46 540 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 RNF148Q8N7C7 305 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 PSD4Q8NDX1 1056 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 OIT3Q8WWZ8 545 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 NODALQ96S42 347 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 THTPAQ9BU02 230 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 RUBCNLQ9H714 662 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 SH2D2AQ9NP31 389 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 KLRF1Q9NZS2 232 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 SUCOQ9UBS9 1254 aaKnown RBP14.15□□□□□ -0.14
DDB1-216ENST00000539739 ABCG2Q9UNQ0 655 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 TP53TG5Q9Y2B4 290 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 SMIM31A0A1B0GVY4 71 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 PRAMEF25A6NGN4 478 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 PDE9AO76083 593 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 OXSR1O95747 527 aaPredicted RBP14.15□□□□□ -0.14
DDB1-216ENST00000539739 CCL3P10147 92 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 ETS2P15036 469 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 TCN1P20061 433 aaPredicted RBP14.15□□□□□ -0.14
DDB1-216ENST00000539739 HTR1EP28566 365 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 EVI2BP34910 448 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 SNTA1Q13424 505 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 RCN1Q15293 331 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 RPS26P11Q5JNZ5 115 aaPredicted RBP14.15□□□□□ -0.14
DDB1-216ENST00000539739 TBCELQ5QJ74 424 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 DESI1Q6ICB0 168 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 SLC25A25Q6KCM7 469 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 ASRGL1Q7L266 308 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 OLIG3Q7RTU3 272 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 MDGA2Q7Z553 956 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 FBXW8Q8N3Y1 598 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 MDS2Q8NDY4 140 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 CATSPER1Q8NEC5 780 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 OR4C3Q8NH37 302 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 MCUR1Q96AQ8 359 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 SPATA5L1Q9BVQ7 753 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 TBL1XR1Q9BZK7 514 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 STOML1Q9UBI4 398 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 CD300AQ9UGN4 299 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 PACSIN3Q9UKS6 424 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 USP22Q9UPT9 525 aa14.15□□□□□ -0.14
DDB1-216ENST00000539739 KLF13Q9Y2Y9 288 aaPredicted RBP14.15□□□□□ -0.14
DDB1-216ENST00000539739 DSPP15924 2871 aaKnown RBP14.14□□□□□ -0.15
DDB1-216ENST00000539739 NPIPA5A0A0B4J1W7 369 aa14.14□□□□□ -0.15
DDB1-216ENST00000539739 NPIPA7E9PJI5 369 aa14.14□□□□□ -0.15
DDB1-216ENST00000539739 H3BNH8 94 aa14.14□□□□□ -0.15
DDB1-216ENST00000539739 SERPINB7O75635 380 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms