RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 ZNF395Q9H8N7 513 aaPredicted RBP10.46□□□□□ -0.73
RTN3-209ENST00000538995 AKTIPQ9H8T0 292 aa10.46□□□□□ -0.73
RTN3-209ENST00000538995 UBQLN4Q9NRR5 601 aa10.46□□□□□ -0.73
RTN3-209ENST00000538995 MED11Q9P086 117 aa10.46□□□□□ -0.73
RTN3-209ENST00000538995 FAF1Q9UNN5 650 aaPredicted RBP10.46□□□□□ -0.73
RTN3-209ENST00000538995 TMEM120BA0PK00 339 aa10.45□□□□□ -0.74
RTN3-209ENST00000538995 C7orf72A4D263 438 aa10.45□□□□□ -0.74
RTN3-209ENST00000538995 RNASET2O00584 256 aaKnown RBP10.45□□□□□ -0.74
RTN3-209ENST00000538995 SCDO00767 359 aa10.45□□□□□ -0.74
RTN3-209ENST00000538995 NDUFB5O43674 189 aa10.45□□□□□ -0.74
RTN3-209ENST00000538995 CRHP06850 196 aa10.45□□□□□ -0.74
RTN3-209ENST00000538995 HPGDP15428 266 aa10.45□□□□□ -0.74
RTN3-209ENST00000538995 ATP6V1C1P21283 382 aa10.45□□□□□ -0.74
RTN3-209ENST00000538995 STARP49675 285 aa10.45□□□□□ -0.74
RTN3-209ENST00000538995 SORDQ00796 357 aa10.45□□□□□ -0.74
RTN3-209ENST00000538995 BST1Q10588 318 aa10.45□□□□□ -0.74
RTN3-209ENST00000538995 MYBPHQ13203 477 aa10.45□□□□□ -0.74
RTN3-209ENST00000538995 TP53BP2Q13625 1128 aa10.45□□□□□ -0.74
RTN3-209ENST00000538995 DPY19L1Q2PZI1 675 aa10.45□□□□□ -0.74
RTN3-209ENST00000538995 TMEM44Q2T9K0 475 aa10.45□□□□□ -0.74
RTN3-209ENST00000538995 OGFOD2Q6N063 350 aa10.45□□□□□ -0.74
RTN3-209ENST00000538995 FIGNL1Q6PIW4 674 aa10.45□□□□□ -0.74
RTN3-209ENST00000538995 APOOLQ6UXV4 268 aa10.45□□□□□ -0.74
RTN3-209ENST00000538995 KIF18BQ86Y91 864 aa10.45□□□□□ -0.74
RTN3-209ENST00000538995 GRAMD2AQ8IUY3 354 aa10.45□□□□□ -0.74
RTN3-209ENST00000538995 ZNF527Q8NB42 609 aa10.45□□□□□ -0.74
RTN3-209ENST00000538995 OR4C3Q8NH37 302 aa10.45□□□□□ -0.74
RTN3-209ENST00000538995 RAB3IL1Q8TBN0 382 aa10.45□□□□□ -0.74
RTN3-209ENST00000538995 ACTRT2Q8TDY3 377 aa10.45□□□□□ -0.74
RTN3-209ENST00000538995 TESCQ96BS2 214 aa10.45□□□□□ -0.74
RTN3-209ENST00000538995 C16orf58Q96GQ5 468 aa10.45□□□□□ -0.74
RTN3-209ENST00000538995 HOXD1Q9GZZ0 328 aa10.45□□□□□ -0.74
RTN3-209ENST00000538995 PIGMQ9H3S5 423 aa10.45□□□□□ -0.74
RTN3-209ENST00000538995 MEAF6Q9HAF1 191 aa10.45□□□□□ -0.74
RTN3-209ENST00000538995 GPATCH2Q9NW75 528 aa10.45□□□□□ -0.74
RTN3-209ENST00000538995 JKAMPQ9P055 326 aa10.45□□□□□ -0.74
RTN3-209ENST00000538995 STOML1Q9UBI4 398 aa10.45□□□□□ -0.74
RTN3-209ENST00000538995 ZNF175Q9Y473 711 aa10.45□□□□□ -0.74
RTN3-209ENST00000538995 AP4B1Q9Y6B7 739 aa10.45□□□□□ -0.74
RTN3-209ENST00000538995 FREM3P0C091 2139 aa10.45□□□□□ -0.74
RTN3-209ENST00000538995 HCFC1P51610 2035 aa10.45□□□□□ -0.74
RTN3-209ENST00000538995 ARHGAP21Q5T5U3 1957 aa10.45□□□□□ -0.74
RTN3-209ENST00000538995 AKAP9Q99996 3911 aa10.44□□□□□ -0.74
RTN3-209ENST00000538995 MED12Q93074 2177 aa10.44□□□□□ -0.74
RTN3-209ENST00000538995 OR2M5A3KFT3 312 aa10.44□□□□□ -0.74
RTN3-209ENST00000538995 EEF1E1-BLOC1S5C9J1V9 151 aa10.44□□□□□ -0.74
RTN3-209ENST00000538995 CFLARO15519 480 aa10.44□□□□□ -0.74
RTN3-209ENST00000538995 EEF1E1O43324 174 aaKnown RBP10.44□□□□□ -0.74
RTN3-209ENST00000538995 TNFRSF21O75509 655 aa10.44□□□□□ -0.74
RTN3-209ENST00000538995 AK1P00568 194 aa10.44□□□□□ -0.74
RTN3-209ENST00000538995 LBPP18428 481 aa10.44□□□□□ -0.74
RTN3-209ENST00000538995 TCEA1P23193 301 aaKnown RBP10.44□□□□□ -0.74
RTN3-209ENST00000538995 UQCRC1P31930 480 aa10.44□□□□□ -0.74
RTN3-209ENST00000538995 KIR2DL3P43628 341 aa10.44□□□□□ -0.74
RTN3-209ENST00000538995 CLNS1AP54105 237 aaKnown RBP10.44□□□□□ -0.74
RTN3-209ENST00000538995 HBA1P69905 142 aa10.44□□□□□ -0.74
RTN3-209ENST00000538995 PGS1Q32NB8 556 aa10.44□□□□□ -0.74
RTN3-209ENST00000538995 BEND6Q5SZJ8 279 aaPredicted RBP10.44□□□□□ -0.74
RTN3-209ENST00000538995 DCST2Q5T1A1 773 aa10.44□□□□□ -0.74
RTN3-209ENST00000538995 OR2A2Q6IF42 318 aa10.44□□□□□ -0.74
RTN3-209ENST00000538995 CHMP1BQ7LBR1 199 aa10.44□□□□□ -0.74
RTN3-209ENST00000538995 MTERF4Q7Z6M4 381 aaKnown RBP10.44□□□□□ -0.74
RTN3-209ENST00000538995 ZAR1Q86SH2 424 aa10.44□□□□□ -0.74
RTN3-209ENST00000538995 GTPBP8Q8N3Z3 284 aaPredicted RBP10.44□□□□□ -0.74
RTN3-209ENST00000538995 METTL25Q8N6Q8 603 aa10.44□□□□□ -0.74
RTN3-209ENST00000538995 ANKRD42Q8N9B4 389 aa10.44□□□□□ -0.74
RTN3-209ENST00000538995 ADAMTS15Q8TE58 950 aa10.44□□□□□ -0.74
RTN3-209ENST00000538995 FAM222BQ8WU58 562 aa10.44□□□□□ -0.74
RTN3-209ENST00000538995 CDS1Q92903 461 aa10.44□□□□□ -0.74
RTN3-209ENST00000538995 ZBTB8AQ96BR9 441 aa10.44□□□□□ -0.74
RTN3-209ENST00000538995 TLCD1Q96CP7 247 aa10.44□□□□□ -0.74
RTN3-209ENST00000538995 CHMP6Q96FZ7 201 aa10.44□□□□□ -0.74
RTN3-209ENST00000538995 PAIP2Q9BPZ3 127 aaKnown RBP10.44□□□□□ -0.74
RTN3-209ENST00000538995 YIPF4Q9BSR8 244 aa10.44□□□□□ -0.74
RTN3-209ENST00000538995 NUF2Q9BZD4 464 aa10.44□□□□□ -0.74
RTN3-209ENST00000538995 DPY30Q9C005 99 aa10.44□□□□□ -0.74
RTN3-209ENST00000538995 THAP1Q9NVV9 213 aa10.44□□□□□ -0.74
RTN3-209ENST00000538995 ANKRD17O75179 2603 aaKnown RBP10.43□□□□□ -0.74
RTN3-209ENST00000538995 SLC22A20A6NK97 555 aa10.43□□□□□ -0.74
RTN3-209ENST00000538995 DUXAA6NLW8 204 aa10.43□□□□□ -0.74
RTN3-209ENST00000538995 TRPC5OSA6NMA1 111 aa10.43□□□□□ -0.74
RTN3-209ENST00000538995 SLCO1B7G3V0H7 640 aa10.43□□□□□ -0.74
RTN3-209ENST00000538995 ANKRD28O15084 1053 aa10.43□□□□□ -0.74
RTN3-209ENST00000538995 SNNO75324 88 aaPredicted RBP10.43□□□□□ -0.74
RTN3-209ENST00000538995 GOSR1O95249 250 aa10.43□□□□□ -0.74
RTN3-209ENST00000538995 FCGR2AP12318 317 aa10.43□□□□□ -0.74
RTN3-209ENST00000538995 SOAT1P35610 550 aa10.43□□□□□ -0.74
RTN3-209ENST00000538995 PCYT1AP49585 367 aa10.43□□□□□ -0.74
RTN3-209ENST00000538995 ZNF41P51814 821 aaPredicted RBP10.43□□□□□ -0.74
RTN3-209ENST00000538995 SUMO3P55854 103 aaPredicted RBP10.43□□□□□ -0.74
RTN3-209ENST00000538995 WDR4P57081 412 aaKnown RBP10.43□□□□□ -0.74
RTN3-209ENST00000538995 KRTAP10-9P60411 292 aa10.43□□□□□ -0.74
RTN3-209ENST00000538995 RPS3AP61247 264 aaKnown RBP10.43□□□□□ -0.74
RTN3-209ENST00000538995 FGFBP1Q14512 234 aa10.43□□□□□ -0.74
RTN3-209ENST00000538995 FLYWCH1Q4VC44 716 aa10.43□□□□□ -0.74
RTN3-209ENST00000538995 CCNJQ5T5M9 372 aa10.43□□□□□ -0.74
RTN3-209ENST00000538995 ANXA8L1Q5VT79 327 aa10.43□□□□□ -0.74
RTN3-209ENST00000538995 ATG16L1Q676U5 607 aa10.43□□□□□ -0.74
RTN3-209ENST00000538995 OR4F3Q6IEY1 312 aa10.43□□□□□ -0.74
RTN3-209ENST00000538995 GALNT10Q86SR1 603 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms