RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 KIR3DX1Q9H7L2 352 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 NTMQ9P121 344 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 YARS2Q9Y2Z4 477 aaKnown RBP13.56□□□□□ -0.24
CDCA3-207ENST00000538862 PLEKHM1Q9Y4G2 1056 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 HEBP2Q9Y5Z4 205 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 RALGAPA1Q6GYQ0 2036 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 SNRNP200O75643 2136 aaKnown RBP13.56□□□□□ -0.24
CDCA3-207ENST00000538862 A0A1W2PS29 197 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 KLF4O43474 513 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 FRS3O43559 492 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 OR5F1O95221 314 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 APBB3O95704 486 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 HOXA6P31267 233 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 TRHRP34981 398 aaPredicted RBP13.56□□□□□ -0.24
CDCA3-207ENST00000538862 RGS8P57771 180 aaPredicted RBP13.56□□□□□ -0.24
CDCA3-207ENST00000538862 RAB8AP61006 207 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 MAP4K2Q12851 820 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 RPE65Q16518 533 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 SLC35F1Q5T1Q4 408 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 TYW3Q6IPR3 259 aaKnown RBP13.56□□□□□ -0.24
CDCA3-207ENST00000538862 METAP1DQ6UB28 335 aaPredicted RBP13.56□□□□□ -0.24
CDCA3-207ENST00000538862 NUDT18Q6ZVK8 323 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 MBOAT2Q6ZWT7 520 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 MEX3DQ86XN8 651 aaKnown RBP13.56□□□□□ -0.24
CDCA3-207ENST00000538862 CACUL1Q86Y37 369 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 RDH10Q8IZV5 341 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 ADAMTS15Q8TE58 950 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 SLC35A4Q96G79 324 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 ST6GAL2Q96JF0 529 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 TM9SF2Q99805 663 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 JAM3Q9BX67 310 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 MTHFD2LQ9H903 347 aaPredicted RBP13.56□□□□□ -0.24
CDCA3-207ENST00000538862 EQTNQ9NQ60 294 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 TOR4AQ9NXH8 423 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 SPHK1Q9NYA1 384 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 SERGEFQ9UGK8 458 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 SPTBN4Q9H254 2564 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 A0A1W2PP55 124 aa13.55□□□□□ -0.24
CDCA3-207ENST00000538862 FAM172BPA6NC97 362 aa13.55□□□□□ -0.24
CDCA3-207ENST00000538862 CCDC182A6NF36 153 aa13.55□□□□□ -0.24
CDCA3-207ENST00000538862 AKAP8O43823 692 aaKnown RBP13.55□□□□□ -0.24
CDCA3-207ENST00000538862 IDH3BO43837 385 aa13.55□□□□□ -0.24
CDCA3-207ENST00000538862 APOL3O95236 402 aa13.55□□□□□ -0.24
CDCA3-207ENST00000538862 HLA-DPB1P04440 258 aa13.55□□□□□ -0.24
CDCA3-207ENST00000538862 HMGN1P05114 100 aa13.55□□□□□ -0.24
CDCA3-207ENST00000538862 CHRM5P08912 532 aaPredicted RBP13.55□□□□□ -0.24
CDCA3-207ENST00000538862 NAT2P11245 290 aa13.55□□□□□ -0.24
CDCA3-207ENST00000538862 GNSP15586 552 aa13.55□□□□□ -0.24
CDCA3-207ENST00000538862 PTBP1P26599 531 aaKnown RBP eCLIP13.55□□□□□ -0.24
CDCA3-207ENST00000538862 FAM214AQ32MH5 1076 aa13.55□□□□□ -0.24
CDCA3-207ENST00000538862 EOGTQ5NDL2 527 aa13.55□□□□□ -0.24
CDCA3-207ENST00000538862 CLEC12AQ5QGZ9 265 aa13.55□□□□□ -0.24
CDCA3-207ENST00000538862 PLEKHM3Q6ZWE6 761 aa13.55□□□□□ -0.24
CDCA3-207ENST00000538862 LHFPL3Q86UP9 236 aa13.55□□□□□ -0.24
CDCA3-207ENST00000538862 NKAIN4Q8IVV8 208 aa13.55□□□□□ -0.24
CDCA3-207ENST00000538862 SAMD14Q8IZD0 417 aaPredicted RBP13.55□□□□□ -0.24
CDCA3-207ENST00000538862 KLHL36Q8N4N3 616 aa13.55□□□□□ -0.24
CDCA3-207ENST00000538862 CAMKK1Q8N5S9 505 aa13.55□□□□□ -0.24
CDCA3-207ENST00000538862 PSD4Q8NDX1 1056 aa13.55□□□□□ -0.24
CDCA3-207ENST00000538862 OR4Q3Q8NH05 313 aa13.55□□□□□ -0.24
CDCA3-207ENST00000538862 MCHR1Q99705 422 aa13.55□□□□□ -0.24
CDCA3-207ENST00000538862 RERGLQ9H628 205 aa13.55□□□□□ -0.24
CDCA3-207ENST00000538862 POLMQ9NP87 494 aaPredicted RBP13.55□□□□□ -0.24
CDCA3-207ENST00000538862 NLGN3Q9NZ94 848 aa13.55□□□□□ -0.24
CDCA3-207ENST00000538862 CLCA2Q9UQC9 943 aa13.55□□□□□ -0.24
CDCA3-207ENST00000538862 GPSM3Q9Y4H4 160 aa13.55□□□□□ -0.24
CDCA3-207ENST00000538862 COLEC10Q9Y6Z7 277 aa13.55□□□□□ -0.24
CDCA3-207ENST00000538862 GOLGA4Q13439 2230 aaKnown RBP13.55□□□□□ -0.24
CDCA3-207ENST00000538862 TBC1D3KA0A087X1G2 549 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 TCRBV21S2A2A0A5A6 115 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 TBC1D3FA6NER0 549 aaPredicted RBP13.54□□□□□ -0.24
CDCA3-207ENST00000538862 IGHA1P01876 353 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 HOXB2P14652 356 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 GALP22466 123 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 CFL1P23528 166 aaKnown RBP13.54□□□□□ -0.24
CDCA3-207ENST00000538862 HTR1FP30939 366 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 AVPR1BP47901 424 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 BTN3A2P78410 334 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 TAB1Q15750 504 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 PGGHGQ32M88 737 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 TBC1D3GQ6DHY5 549 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 MFSD12Q6NUT3 480 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 CDC73Q6P1J9 531 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 GDF7Q7Z4P5 450 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 VWA5B2Q8N398 1253 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 ARIH2OSQ8N7S6 290 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 OR52N1Q8NH53 320 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 HMGB4Q8WW32 186 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 KLK6Q92876 244 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 GAL3ST3Q96A11 431 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 SCARF2Q96GP6 870 aaPredicted RBP13.54□□□□□ -0.24
CDCA3-207ENST00000538862 SLC41A3Q96GZ6 507 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 C10orf90Q96M02 699 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 DEPDC7Q96QD5 511 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 SOSTQ9BQB4 213 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 KRCC1Q9NPI7 259 aaPredicted RBP13.54□□□□□ -0.24
CDCA3-207ENST00000538862 ASB6Q9NWX5 421 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 CASKO14936 926 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 FCMRO60667 390 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 HCN1O60741 890 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms