RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 THBS1P07996 1170 aa9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 CYP4B1P13584 511 aa9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ANPEPP15144 967 aa9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 CD247P20963 164 aa9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ITPKBP27987 946 aa9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 PRKAR1BP31321 381 aa9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 MAP3K8P41279 467 aa9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 OR1E2P47887 323 aa9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 KCNJ5P48544 419 aa9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 CCL11P51671 97 aa9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 PCBP3P57721 371 aaKnown RBP9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 COPZ1P61923 177 aa9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 KCNJ10P78508 379 aa9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 KCNC4Q03721 635 aa9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 FUT5Q11128 374 aa9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 FXNQ16595 210 aa9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 GRAMD1BQ3KR37 738 aa9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ATP1A1-AS1Q5TC04 95 aa9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 RRM2BQ7LG56 351 aa9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ZNF550Q7Z398 422 aa9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 CARM1Q86X55 608 aa9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ADGRG5Q8IZF4 528 aa9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 GATSQ8NAP1 163 aa9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ICA1LQ8NDH6 482 aa9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 FAM110BQ8TC76 370 aa9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 HOXB13Q92826 284 aaPredicted RBP9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ZNF347Q96SE7 839 aa9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 FNDC11Q9BVV2 318 aa9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 VCX3BQ9H321 246 aa9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 EVA1AQ9H8M9 152 aa9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 HHATLQ9HCP6 504 aa9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ZNF223Q9UK11 482 aaPredicted RBP9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 SLC35A3Q9Y2D2 325 aa9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 MED19A0JLT2 244 aaPredicted RBP9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 SERINC4A6NH21 518 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 GMFGO60234 142 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 MGRN1O60291 552 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ICOSLGO75144 302 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 OXSR1O95747 527 aaPredicted RBP9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 IGKV1D-16P01601 117 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 P04436 131 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 GUSBP08236 651 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 UBTFL6P0CB48 400 aaPredicted RBP9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 NID1P14543 1247 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 TNFRSF1BP20333 461 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 TBXA2RP21731 343 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 RYKP34925 604 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 SOX3P41225 446 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 YAP1P46937 504 aaKnown RBP9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 FBXW4P57775 412 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 MLF1P58340 268 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 SMIM11AP58511 58 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 TAS2R41P59536 307 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 SPIBQ01892 262 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 SLC34A1Q06495 639 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 CDC20Q12834 499 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 CHAF1BQ13112 559 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 RIPK1Q13546 671 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 RAPSNQ13702 412 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 DUSP7Q16829 419 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ACER2Q5QJU3 275 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 AGAP7PQ5VUJ5 663 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 FBXW10Q5XX13 1052 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 DHRS4L2Q6PKH6 230 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ZNF836Q6ZNA1 936 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 LINC00696Q6ZRV3 163 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 PLEKHM3Q6ZWE6 761 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 AMIGO2Q86SJ2 522 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 CMIPQ8IY22 773 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ZNF440Q8IYI8 595 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 DND1Q8IYX4 353 aaKnown RBP9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 GALNT16Q8N428 558 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ZNF563Q8TA94 476 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 LRTOMTQ8WZ04 291 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ZG16BQ96DA0 208 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 SPACA9Q96E40 222 aaPredicted RBP9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 AGAP4Q96P64 663 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 LMF1Q96S06 567 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 RASL10BQ96S79 203 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 UTP23Q9BRU9 249 aaKnown RBP9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 SAP130Q9H0E3 1048 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ING2Q9H160 280 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 SEMA6AQ9H2E6 1030 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 RASSF4Q9H2L5 321 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 VCXQ9H320 206 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 REEP1Q9H902 201 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 RNPEPL1Q9HAU8 725 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 TMEM27Q9HBJ8 222 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ARMC1Q9NVT9 282 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 C6orf203Q9P0P8 240 aaPredicted RBP9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 STOML1Q9UBI4 398 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 TMCC3Q9ULS5 477 aa9.81□□□□□ -0.84
TNFRSF1A-211ENST00000538363 A0A1W2PQ72 361 aa9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 M0R3H8 397 aa9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 SYT5O00445 386 aa9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 CLOCKO15516 846 aa9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ZNF264O43296 627 aa9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 HCRTR2O43614 444 aa9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 TSPAN2O60636 221 aa9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 UGT2B11O75310 529 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms