RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 PIF1Q9H611 641 aa14.91□□□□□ -0.02
VAMP1-205ENST00000535927 RUBCNLQ9H714 662 aa14.91□□□□□ -0.02
VAMP1-205ENST00000535927 SACM1LQ9NTJ5 587 aa14.91□□□□□ -0.02
VAMP1-205ENST00000535927 DCAF13Q9NV06 445 aaKnown RBP14.91□□□□□ -0.02
VAMP1-205ENST00000535927 KLHL28Q9NXS3 571 aa14.91□□□□□ -0.02
VAMP1-205ENST00000535927 LRFN1Q9P244 771 aa14.91□□□□□ -0.02
VAMP1-205ENST00000535927 SEC14L3Q9UDX4 400 aa14.91□□□□□ -0.02
VAMP1-205ENST00000535927 SLC7A8Q9UHI5 535 aa14.91□□□□□ -0.02
VAMP1-205ENST00000535927 MKLN1Q9UL63 735 aa14.91□□□□□ -0.02
VAMP1-205ENST00000535927 NINQ8N4C6 2090 aa14.9□□□□□ -0.02
VAMP1-205ENST00000535927 ACOT8O14734 319 aa14.9□□□□□ -0.02
VAMP1-205ENST00000535927 EIF4E2O60573 245 aaKnown RBP14.9□□□□□ -0.02
VAMP1-205ENST00000535927 UGT2B17O75795 530 aa14.9□□□□□ -0.02
VAMP1-205ENST00000535927 WDPCPO95876 746 aa14.9□□□□□ -0.02
VAMP1-205ENST00000535927 P04436 131 aa14.9□□□□□ -0.02
VAMP1-205ENST00000535927 PABPC4LP0CB38 370 aaKnown RBP14.9□□□□□ -0.02
VAMP1-205ENST00000535927 NID1P14543 1247 aa14.9□□□□□ -0.02
VAMP1-205ENST00000535927 NQO1P15559 274 aaKnown RBP14.9□□□□□ -0.02
VAMP1-205ENST00000535927 TCN1P20061 433 aaPredicted RBP14.9□□□□□ -0.02
VAMP1-205ENST00000535927 EVI2BP34910 448 aa14.9□□□□□ -0.02
VAMP1-205ENST00000535927 SELENOWP63302 87 aa14.9□□□□□ -0.02
VAMP1-205ENST00000535927 KCNJ10P78508 379 aa14.9□□□□□ -0.02
VAMP1-205ENST00000535927 OC90Q02509 493 aaPredicted RBP14.9□□□□□ -0.02
VAMP1-205ENST00000535927 C17orf67Q0P5P2 114 aa14.9□□□□□ -0.02
VAMP1-205ENST00000535927 TUBA3CQ13748 450 aa14.9□□□□□ -0.02
VAMP1-205ENST00000535927 ZNF311Q5JNZ3 666 aa14.9□□□□□ -0.02
VAMP1-205ENST00000535927 CCNJQ5T5M9 372 aa14.9□□□□□ -0.02
VAMP1-205ENST00000535927 FCRLBQ6BAA4 426 aa14.9□□□□□ -0.02
VAMP1-205ENST00000535927 TUBA3EQ6PEY2 450 aa14.9□□□□□ -0.02
VAMP1-205ENST00000535927 CBLL1Q75N03 491 aa14.9□□□□□ -0.02
VAMP1-205ENST00000535927 EIF3MQ7L2H7 374 aaKnown RBP14.9□□□□□ -0.02
VAMP1-205ENST00000535927 RNF148Q8N7C7 305 aa14.9□□□□□ -0.02
VAMP1-205ENST00000535927 FAM13CQ8NE31 585 aa14.9□□□□□ -0.02
VAMP1-205ENST00000535927 FAM162AQ96A26 154 aa14.9□□□□□ -0.02
VAMP1-205ENST00000535927 NTNG2Q96CW9 530 aa14.9□□□□□ -0.02
VAMP1-205ENST00000535927 OTUB1Q96FW1 271 aaPredicted RBP14.9□□□□□ -0.02
VAMP1-205ENST00000535927 WBP1Q96G27 269 aa14.9□□□□□ -0.02
VAMP1-205ENST00000535927 FRMD6Q96NE9 622 aa14.9□□□□□ -0.02
VAMP1-205ENST00000535927 ANGPTL4Q9BY76 406 aa14.9□□□□□ -0.02
VAMP1-205ENST00000535927 TBL1XR1Q9BZK7 514 aa14.9□□□□□ -0.02
VAMP1-205ENST00000535927 SLC13A4Q9UKG4 626 aa14.9□□□□□ -0.02
VAMP1-205ENST00000535927 POMPQ9Y244 141 aa14.9□□□□□ -0.02
VAMP1-205ENST00000535927 KLF13Q9Y2Y9 288 aaPredicted RBP14.9□□□□□ -0.02
VAMP1-205ENST00000535927 CHCHD2Q9Y6H1 151 aaPredicted RBP14.9□□□□□ -0.02
VAMP1-205ENST00000535927 TRAV17A0A0B4J275 112 aa14.89□□□□□ -0.03
VAMP1-205ENST00000535927 SERINC4A6NH21 518 aa14.89□□□□□ -0.03
VAMP1-205ENST00000535927 KLRC4-KLRK1H3BQV0 150 aa14.89□□□□□ -0.03
VAMP1-205ENST00000535927 MASP2O00187 686 aa14.89□□□□□ -0.03
VAMP1-205ENST00000535927 ARPC2O15144 300 aa14.89□□□□□ -0.03
VAMP1-205ENST00000535927 SUV39H1O43463 412 aa14.89□□□□□ -0.03
VAMP1-205ENST00000535927 DPM1O60762 260 aa14.89□□□□□ -0.03
VAMP1-205ENST00000535927 ZNF354AO60765 605 aaPredicted RBP14.89□□□□□ -0.03
VAMP1-205ENST00000535927 ICOSLGO75144 302 aa14.89□□□□□ -0.03
VAMP1-205ENST00000535927 OXSR1O95747 527 aaPredicted RBP14.89□□□□□ -0.03
VAMP1-205ENST00000535927 CNR1P21554 472 aa14.89□□□□□ -0.03
VAMP1-205ENST00000535927 CASP3P42574 277 aa14.89□□□□□ -0.03
VAMP1-205ENST00000535927 RFX3P48380 749 aa14.89□□□□□ -0.03
VAMP1-205ENST00000535927 KCNJ5P48544 419 aa14.89□□□□□ -0.03
VAMP1-205ENST00000535927 FBXW4P57775 412 aa14.89□□□□□ -0.03
VAMP1-205ENST00000535927 ARG2P78540 354 aa14.89□□□□□ -0.03
VAMP1-205ENST00000535927 FLOT2Q14254 428 aa14.89□□□□□ -0.03
VAMP1-205ENST00000535927 FGFBP1Q14512 234 aa14.89□□□□□ -0.03
VAMP1-205ENST00000535927 GRAMD1BQ3KR37 738 aa14.89□□□□□ -0.03
VAMP1-205ENST00000535927 C16orf47Q6ZP98 133 aaPredicted RBP14.89□□□□□ -0.03
VAMP1-205ENST00000535927 ZNF771Q7L3S4 317 aaPredicted RBP14.89□□□□□ -0.03
VAMP1-205ENST00000535927 PACS2Q86VP3 889 aa14.89□□□□□ -0.03
VAMP1-205ENST00000535927 PRR22Q8IZ63 422 aa14.89□□□□□ -0.03
VAMP1-205ENST00000535927 POGLUT1Q8NBL1 392 aa14.89□□□□□ -0.03
VAMP1-205ENST00000535927 TMEM178AQ8NBL3 297 aa14.89□□□□□ -0.03
VAMP1-205ENST00000535927 OR4C3Q8NH37 302 aa14.89□□□□□ -0.03
VAMP1-205ENST00000535927 WDR60Q8WVS4 1066 aa14.89□□□□□ -0.03
VAMP1-205ENST00000535927 C5orf34Q96MH7 638 aa14.89□□□□□ -0.03
VAMP1-205ENST00000535927 DOHHQ9BU89 302 aa14.89□□□□□ -0.03
VAMP1-205ENST00000535927 UGT2B28Q9BY64 529 aa14.89□□□□□ -0.03
VAMP1-205ENST00000535927 METTL7AQ9H8H3 244 aa14.89□□□□□ -0.03
VAMP1-205ENST00000535927 EXOSC3Q9NQT5 275 aaKnown RBP14.89□□□□□ -0.03
VAMP1-205ENST00000535927 FBXO34Q9NWN3 711 aa14.89□□□□□ -0.03
VAMP1-205ENST00000535927 EGFL7Q9UHF1 273 aa14.89□□□□□ -0.03
VAMP1-205ENST00000535927 LOC400499M0QZD8 3231 aa14.89□□□□□ -0.03
VAMP1-205ENST00000535927 ASH1LQ9NR48 2969 aaKnown RBP14.88□□□□□ -0.03
VAMP1-205ENST00000535927 IGLV3-32A0A0A0MS00 114 aa14.88□□□□□ -0.03
VAMP1-205ENST00000535927 PRAMEF25A6NGN4 478 aa14.88□□□□□ -0.03
VAMP1-205ENST00000535927 NDUFB5O43674 189 aa14.88□□□□□ -0.03
VAMP1-205ENST00000535927 MAN1A2O60476 641 aa14.88□□□□□ -0.03
VAMP1-205ENST00000535927 GCM2O75603 506 aaPredicted RBP14.88□□□□□ -0.03
VAMP1-205ENST00000535927 PDE5AO76074 875 aa14.88□□□□□ -0.03
VAMP1-205ENST00000535927 ELAVL4P26378 380 aaKnown RBP14.88□□□□□ -0.03
VAMP1-205ENST00000535927 TNFSF10P50591 281 aa14.88□□□□□ -0.03
VAMP1-205ENST00000535927 SUMO3P55854 103 aaPredicted RBP14.88□□□□□ -0.03
VAMP1-205ENST00000535927 OR1C1Q15619 314 aa14.88□□□□□ -0.03
VAMP1-205ENST00000535927 SLC25A25Q6KCM7 469 aa14.88□□□□□ -0.03
VAMP1-205ENST00000535927 LINC00696Q6ZRV3 163 aa14.88□□□□□ -0.03
VAMP1-205ENST00000535927 PSD4Q8NDX1 1056 aa14.88□□□□□ -0.03
VAMP1-205ENST00000535927 MDS2Q8NDY4 140 aa14.88□□□□□ -0.03
VAMP1-205ENST00000535927 PROX1Q92786 737 aa14.88□□□□□ -0.03
VAMP1-205ENST00000535927 CLPTM1LQ96KA5 538 aa14.88□□□□□ -0.03
VAMP1-205ENST00000535927 ARHGAP9Q9BRR9 750 aa14.88□□□□□ -0.03
VAMP1-205ENST00000535927 MAGIXQ9H6Y5 334 aa14.88□□□□□ -0.03
VAMP1-205ENST00000535927 CNOT11Q9UKZ1 510 aaKnown RBP14.88□□□□□ -0.03
VAMP1-205ENST00000535927 SLC9A8Q9Y2E8 581 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms