RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 TBL1XO60907 577 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 NADKO95544 446 aaPredicted RBP2.84□□□□□ -1.95
SNHG1-202ENST00000535689 CPNE6O95741 557 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 TNFP01375 233 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 MT-ND3P03897 115 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 GPIP06744 558 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 CPA3P15088 417 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 AZGP1P25311 298 aaKnown RBP2.84□□□□□ -1.95
SNHG1-202ENST00000535689 SSTR1P30872 391 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 MAT2AP31153 395 aaKnown RBP2.84□□□□□ -1.95
SNHG1-202ENST00000535689 TIA1P31483 386 aaKnown RBP eCLIP2.84□□□□□ -1.953e-6■■■■□ 22.3
SNHG1-202ENST00000535689 PRKCIP41743 596 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 VEGFCP49767 419 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 PLK1P53350 603 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 TMEM50BP56557 158 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 GNB1P62873 340 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 CCL7P80098 99 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 HMGN5P82970 282 aaKnown RBP2.84□□□□□ -1.95
SNHG1-202ENST00000535689 ZFP36L1Q07352 338 aaKnown RBP2.84□□□□□ -1.95
SNHG1-202ENST00000535689 CDH18Q13634 790 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 NFE2L1Q14494 772 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 RBM39Q14498 530 aaKnown RBP2.84□□□□□ -1.95
SNHG1-202ENST00000535689 SQLEQ14534 574 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 DEFB109BQ30KR1 87 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 ATP1A1-AS1Q5TC04 95 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 ARMC3Q5W041 872 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 TMEM215Q68D42 235 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 GUSBP11Q6P575 273 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 IYDQ6PHW0 289 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 LEKR1Q6ZMV7 388 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 TMEM182Q6ZP80 229 aaPredicted RBP2.84□□□□□ -1.95
SNHG1-202ENST00000535689 PTAR1Q7Z6K3 402 aaPredicted RBP2.84□□□□□ -1.95
SNHG1-202ENST00000535689 LRRTM1Q86UE6 522 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 GPBP1Q86WP2 473 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 HORMAD1Q86X24 394 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 ZFAND4Q86XD8 727 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 LACC1Q8IV20 430 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 CIARTQ8N365 385 aaPredicted RBP2.84□□□□□ -1.95
SNHG1-202ENST00000535689 ZNF614Q8N883 585 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 ARL10Q8N8L6 244 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 FAM184AQ8NB25 1140 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 DENND6BQ8NEG7 585 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 Q8NFD4 153 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 BEST4Q8NFU0 473 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 KBTBD8Q8NFY9 601 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 RAB7BQ96AH8 199 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 ULK4Q96C45 1275 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 ZNF501Q96CX3 271 aaPredicted RBP2.84□□□□□ -1.95
SNHG1-202ENST00000535689 C8orf76Q96K31 380 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 AGAP3Q96P47 875 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 TRIM62Q9BVG3 475 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 DUSP16Q9BY84 665 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 FUT8Q9BYC5 575 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 DPEP2Q9H4A9 486 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 MARCH7Q9H992 704 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 GPN1Q9HCN4 374 aaPredicted RBP2.84□□□□□ -1.95
SNHG1-202ENST00000535689 SDF2L1Q9HCN8 221 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 AGPAT4Q9NRZ5 378 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 IARS2Q9NSE4 1012 aaKnown RBP2.84□□□□□ -1.95
SNHG1-202ENST00000535689 STOML2Q9UJZ1 356 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 PPP1R3CQ9UQK1 317 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 ERVK-19Q9WJR5 959 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 MRPS28Q9Y2Q9 187 aaKnown RBP2.84□□□□□ -1.95
SNHG1-202ENST00000535689 PRSS21Q9Y6M0 314 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 ABCA2Q9BZC7 2435 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 SHANK1Q9Y566 2161 aa2.84□□□□□ -1.96
SNHG1-202ENST00000535689 HIVEP1P15822 2718 aa2.84□□□□□ -1.96
SNHG1-202ENST00000535689 A0A0U1RQK1 487 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 ZNF320A2RRD8 509 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 C10orf142B7Z368 130 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 D6RAR5 112 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 CACNB4O00305 520 aaPredicted RBP2.83□□□□□ -1.96
SNHG1-202ENST00000535689 NR5A2O00482 541 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 PGRMC2O15173 223 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 NUDT21O43809 227 aaKnown RBP2.83□□□□□ -1.96
SNHG1-202ENST00000535689 ACSL4O60488 711 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 RAD1O60671 282 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 LETM1O95202 739 aaPredicted RBP2.83□□□□□ -1.96
SNHG1-202ENST00000535689 PNPP00491 289 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 IGHEP01854 428 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 AMBPP02760 352 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 RPLP0P05388 317 aaKnown RBP2.83□□□□□ -1.96
SNHG1-202ENST00000535689 PATE4P0C8F1 98 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 GIMD1P0DJR0 217 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 SLC2A3P11169 496 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 ZNF26P17031 533 aaPredicted RBP2.83□□□□□ -1.96
SNHG1-202ENST00000535689 TLX1P31314 330 aaPredicted RBP2.83□□□□□ -1.96
SNHG1-202ENST00000535689 STIP1P31948 543 aaKnown RBP2.83□□□□□ -1.96
SNHG1-202ENST00000535689 UGT1A3P35503 534 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 LONP1P36776 959 aaKnown RBP2.83□□□□□ -1.96
SNHG1-202ENST00000535689 CSKP41240 450 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 ALDH3B1P43353 468 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 OR3A2P47893 321 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 PSMD8P48556 350 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 KHKP50053 298 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 NDST1P52848 882 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 ATP12AP54707 1039 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 KRTAP10-9P60411 292 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 YWHAGP61981 247 aaKnown RBP eCLIP2.83□□□□□ -1.96
SNHG1-202ENST00000535689 CDKL1Q00532 357 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms