RNA–Protein interactions for RNA: ENST00000535191.5

NEK4-207, Transcript of NIMA related kinase 4, humanhuman

TSL 2 BASIC

Gene NEK4, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-207ENST00000535191 CCDC3Q9BQI4 270 aa12.87□□□□□ -0.35
NEK4-207ENST00000535191 ARHGAP9Q9BRR9 750 aa12.87□□□□□ -0.35
NEK4-207ENST00000535191 ERVK13-1Q9NX77 482 aa12.87□□□□□ -0.35
NEK4-207ENST00000535191 USP36Q9P275 1121 aaKnown RBP12.87□□□□□ -0.35
NEK4-207ENST00000535191 HCRTR1O43613 425 aa12.86□□□□□ -0.35
NEK4-207ENST00000535191 IL1AP01583 271 aa12.86□□□□□ -0.35
NEK4-207ENST00000535191 CTSEP14091 401 aa12.86□□□□□ -0.35
NEK4-207ENST00000535191 TYRP1P17643 537 aa12.86□□□□□ -0.35
NEK4-207ENST00000535191 HTR2AP28223 471 aa12.86□□□□□ -0.35
NEK4-207ENST00000535191 TGM4P49221 684 aa12.86□□□□□ -0.35
NEK4-207ENST00000535191 KRR1Q13601 381 aaKnown RBP12.86□□□□□ -0.35
NEK4-207ENST00000535191 CRTC2Q53ET0 693 aaPredicted RBP12.86□□□□□ -0.35
NEK4-207ENST00000535191 ANKRD9Q96BM1 317 aaPredicted RBP12.86□□□□□ -0.35
NEK4-207ENST00000535191 UBQLN3Q9H347 655 aa12.86□□□□□ -0.35
NEK4-207ENST00000535191 YARS2Q9Y2Z4 477 aaKnown RBP12.86□□□□□ -0.35
NEK4-207ENST00000535191 SF3B6Q9Y3B4 125 aaKnown RBP12.86□□□□□ -0.35
NEK4-207ENST00000535191 CSNK1G3Q9Y6M4 447 aa12.86□□□□□ -0.35
NEK4-207ENST00000535191 SPTY2D1-AS1A0A0U1RR47 76 aa12.86□□□□□ -0.35
NEK4-207ENST00000535191 GXYLT2A0PJZ3 443 aa12.86□□□□□ -0.35
NEK4-207ENST00000535191 CDHR4A6H8M9 788 aa12.86□□□□□ -0.35
NEK4-207ENST00000535191 UNC119BA6NIH7 251 aa12.86□□□□□ -0.35
NEK4-207ENST00000535191 C10orf142B7Z368 130 aa12.86□□□□□ -0.35
NEK4-207ENST00000535191 PTTG1O95997 202 aa12.86□□□□□ -0.35
NEK4-207ENST00000535191 SPNP16150 400 aa12.86□□□□□ -0.35
NEK4-207ENST00000535191 MAP3K8P41279 467 aa12.86□□□□□ -0.35
NEK4-207ENST00000535191 SLC1A3P43003 542 aa12.86□□□□□ -0.35
NEK4-207ENST00000535191 RPS25P62851 125 aaKnown RBP12.86□□□□□ -0.35
NEK4-207ENST00000535191 CCINQ13939 588 aa12.86□□□□□ -0.35
NEK4-207ENST00000535191 KIAA0895LQ68EN5 471 aa12.86□□□□□ -0.35
NEK4-207ENST00000535191 HSDL2Q6YN16 418 aa12.86□□□□□ -0.35
NEK4-207ENST00000535191 LSRQ86X29 649 aaPredicted RBP12.86□□□□□ -0.35
NEK4-207ENST00000535191 RNF113BQ8IZP6 322 aaKnown RBP12.86□□□□□ -0.35
NEK4-207ENST00000535191 CLDN22Q8N7P3 220 aa12.86□□□□□ -0.35
NEK4-207ENST00000535191 ZBTB8BQ8NAP8 495 aaPredicted RBP12.86□□□□□ -0.35
NEK4-207ENST00000535191 SMRP1Q8NCR6 262 aa12.86□□□□□ -0.35
NEK4-207ENST00000535191 BBS1Q8NFJ9 593 aa12.86□□□□□ -0.35
NEK4-207ENST00000535191 UFD1Q92890 307 aa12.86□□□□□ -0.35
NEK4-207ENST00000535191 SLC25A46Q96AG3 418 aa12.86□□□□□ -0.35
NEK4-207ENST00000535191 TOE1Q96GM8 510 aaKnown RBP12.86□□□□□ -0.35
NEK4-207ENST00000535191 DPH1Q9BZG8 443 aa12.86□□□□□ -0.35
NEK4-207ENST00000535191 FAM60AQ9NP50 221 aa12.86□□□□□ -0.35
NEK4-207ENST00000535191 TOR4AQ9NXH8 423 aa12.86□□□□□ -0.35
NEK4-207ENST00000535191 CBLCQ9ULV8 474 aa12.86□□□□□ -0.35
NEK4-207ENST00000535191 CYP8B1Q9UNU6 501 aa12.86□□□□□ -0.35
NEK4-207ENST00000535191 EXOGQ9Y2C4 368 aaKnown RBP12.86□□□□□ -0.35
NEK4-207ENST00000535191 OR5K3A6NET4 321 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 SLC30A4O14863 429 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 LRRTM2O43300 516 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 CLEC2LP0C7M8 214 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 THEGLP0DJG4 465 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 HTR1FP30939 366 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 ATP6V1E1P36543 226 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 CD79BP40259 229 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 CCR5P51681 352 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 DEFA1P59665 94 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 DEFA3P59666 94 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 POU6F2P78424 691 aaPredicted RBP12.85□□□□□ -0.35
NEK4-207ENST00000535191 FZD2Q14332 565 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 NXNL2Q5VZ03 156 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 ARMC6Q6NXE6 501 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 TMPRSS11AQ6ZMR5 421 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 WDR88Q6ZMY6 472 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 GDPD3Q7L5L3 318 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 OOSP2Q86WS3 158 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 CPOQ8IVL8 374 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 ZNF485Q8NCK3 441 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 TMEM239Q8WW34 195 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 ASB15Q8WXK1 588 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 HPS1Q92902 700 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 OTULINQ96BN8 352 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 CTHRC1Q96CG8 243 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 KCTD7Q96MP8 289 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 TM9SF2Q99805 663 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 CCDC32Q9BV29 185 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 C14orf119Q9NWQ9 140 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 TRAPPC4Q9Y296 219 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 AQP9O43315 295 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 RDH16O75452 317 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 KCNK2O95069 426 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 AK1P00568 194 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 MSL3P1P0C860 447 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 MAKP20794 623 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 GCGRP47871 477 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 RAB38P57729 211 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 HHEXQ03014 270 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 DSG2Q14126 1118 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 OR8H2Q8N162 312 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 OR9A4Q8NGU2 314 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 PFN4Q8NHR9 129 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 BRIX1Q8TDN6 353 aaKnown RBP12.85□□□□□ -0.35
NEK4-207ENST00000535191 PMM1Q92871 262 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 CD180Q99467 661 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 OR52D1Q9H346 318 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 CAPN10Q9HC96 672 aa12.85□□□□□ -0.35
NEK4-207ENST00000535191 SIDT1Q9NXL6 827 aaKnown RBP12.85□□□□□ -0.35
NEK4-207ENST00000535191 ZNF223Q9UK11 482 aaPredicted RBP12.85□□□□□ -0.35
NEK4-207ENST00000535191 ARHGEF17Q96PE2 2063 aaPredicted RBP12.85□□□□□ -0.35
NEK4-207ENST00000535191 IQCMA0A1B0GVH7 501 aa12.84□□□□□ -0.35
NEK4-207ENST00000535191 SHISA7A6NL88 538 aa12.84□□□□□ -0.35
NEK4-207ENST00000535191 C2CD4DB7Z1M9 353 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms