RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	LAP3	P28838	519 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	EPS15	P42566	896 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	CDKN1B	P46527	198 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	DNA2	P51530	1060 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	AP3M2	P53677	418 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	DVL1P1	P54792	670 aa	Predicted RBP	4.04	□□□□□ -1.76
ATM-223	ENST00000533979	HADHB	P55084	474 aa	Known RBP	4.04	□□□□□ -1.76
ATM-223	ENST00000533979	CDH4	P55283	916 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	CDH11	P55287	796 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	OR1D5	P58170	312 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	CTAG1A	P78358	180 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	KLF5	Q13887	457 aa	Predicted RBP	4.04	□□□□□ -1.76
ATM-223	ENST00000533979	SYPL1	Q16563	259 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	TMEM44	Q2T9K0	475 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	TMEM30B	Q3MIR4	351 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	ATL3	Q6DD88	541 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	TTC19	Q6DKK2	380 aa	Predicted RBP	4.04	□□□□□ -1.76
ATM-223	ENST00000533979	SLC24A5	Q71RS6	500 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	BZW1	Q7L1Q6	419 aa	Known RBP	4.04	□□□□□ -1.76
ATM-223	ENST00000533979	ASRGL1	Q7L266	308 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	P4HA3	Q7Z4N8	544 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	ITIH5	Q86UX2	942 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	TMEM123	Q8N131	208 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	SPERT	Q8NA61	448 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	BPIFC	Q8NFQ6	507 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	OR7A2P	Q8NGA2	310 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	RDH11	Q8TC12	318 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	TCP11	Q8WWU5	503 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	SMPDL3A	Q92484	453 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	FAM3C	Q92520	227 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	MCUR1	Q96AQ8	359 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	ISG20	Q96AZ6	181 aa	Known RBP	4.04	□□□□□ -1.76
ATM-223	ENST00000533979	SCRN2	Q96FV2	425 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	ZNF274	Q96GC6	653 aa	Predicted RBP	4.04	□□□□□ -1.76
ATM-223	ENST00000533979	PCED1B	Q96HM7	432 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	NEDD4L	Q96PU5	975 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	CHP1	Q99653	195 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	DCTN5	Q9BTE1	182 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	EGLN3	Q9H6Z9	239 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	S100A14	Q9HCY8	104 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	GDF3	Q9NR23	364 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	CHMP5	Q9NZZ3	219 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	RNF6	Q9Y252	685 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	GSTK1	Q9Y2Q3	226 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	MON2	Q7Z3U7	1717 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	PIK3C2A	O00443	1686 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	TONSL	Q96HA7	1378 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	EVC2	Q86UK5	1308 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	WASHC1	A8K0Z3	465 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	RNF13	O43567	381 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	SYNGR3	O43761	229 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	NMT2	O60551	498 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	CDH16	O75309	829 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	UPK3A	O75631	287 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	FLOT1	O75955	427 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	BAG4	O95429	457 aa	Known RBP	4.03	□□□□□ -1.76
ATM-223	ENST00000533979	YEATS4	O95619	227 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	KRT6A	P02538	564 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	UQCRB	P14927	111 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	ZNF24	P17028	368 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	EFNA1	P20827	205 aa	Predicted RBP	4.03	□□□□□ -1.76
ATM-223	ENST00000533979	CPN2	P22792	545 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	CTNNA2	P26232	953 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	MAT2A	P31153	395 aa	Known RBP	4.03	□□□□□ -1.76
ATM-223	ENST00000533979	HTR5A	P47898	357 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	CCT3	P49368	545 aa	Known RBP	4.03	□□□□□ -1.76
ATM-223	ENST00000533979	SGSH	P51688	502 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	RPL24	P83731	157 aa	Known RBP	4.03	□□□□□ -1.76
ATM-223	ENST00000533979	CDKL1	Q00532	357 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	MYL7	Q01449	175 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	MAB21L1	Q13394	359 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	WDR43	Q15061	677 aa	Known RBP eCLIP	4.03	□□□□□ -1.76
ATM-223	ENST00000533979	EXT1	Q16394	746 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	MAPK6	Q16659	721 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	SLC25A53	Q5H9E4	307 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	SLC35E4	Q6ICL7	350 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979		Q7L0L9	218 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	CACUL1	Q86Y37	369 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	GPC2	Q8N158	579 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	ELMOD1	Q8N336	334 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	COMMD1	Q8N668	190 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	KLHDC9	Q8NEP7	349 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	OR13C3	Q8NGS6	347 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	OR8K3	Q8NH51	312 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	KCNG3	Q8TAE7	436 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	FAM76A	Q8TAV0	307 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	NANP	Q8TBE9	248 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	C19orf60	Q96EN9	201 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	NRBF2	Q96F24	287 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	SLC47A1	Q96FL8	570 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	SH3YL1	Q96HL8	342 aa	Predicted RBP	4.03	□□□□□ -1.76
ATM-223	ENST00000533979	ANKRD27	Q96NW4	1050 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	TGM7	Q96PF1	710 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	F2RL3	Q96RI0	385 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	CXXC4	Q9H2H0	198 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	CPVL	Q9H3G5	476 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	ZNF696	Q9H7X3	374 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	C1orf123	Q9NWV4	160 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	PISD	Q9UG56	409 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	MAN1B1	Q9UKM7	699 aa		4.03	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms