RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 UBQLN4Q9NRR5 601 aa12.09□□□□□ -0.47
CAPN1-207ENST00000527189 DUSP22Q9NRW4 184 aa12.09□□□□□ -0.47
CAPN1-207ENST00000527189 ATAD3AQ9NVI7 634 aa12.09□□□□□ -0.47
CAPN1-207ENST00000527189 NDRG3Q9UGV2 375 aa12.09□□□□□ -0.47
CAPN1-207ENST00000527189 A0A1W2PNV4 684 aa12.08□□□□□ -0.48
CAPN1-207ENST00000527189 A0A1W2PQD3 144 aa12.08□□□□□ -0.48
CAPN1-207ENST00000527189 A0A1W2PRB8 838 aa12.08□□□□□ -0.48
CAPN1-207ENST00000527189 C17orf51A8MQB3 221 aa12.08□□□□□ -0.48
CAPN1-207ENST00000527189 TMEM233B4DJY2 109 aa12.08□□□□□ -0.48
CAPN1-207ENST00000527189 SCAMP2O15127 329 aaKnown RBP12.08□□□□□ -0.48
CAPN1-207ENST00000527189 NDUFB5O43674 189 aa12.08□□□□□ -0.48
CAPN1-207ENST00000527189 TYROBPO43914 113 aa12.08□□□□□ -0.48
CAPN1-207ENST00000527189 PEX11AO75192 247 aa12.08□□□□□ -0.48
CAPN1-207ENST00000527189 SNUPNO95149 360 aaKnown RBP12.08□□□□□ -0.48
CAPN1-207ENST00000527189 OXSR1O95747 527 aaPredicted RBP12.08□□□□□ -0.48
CAPN1-207ENST00000527189 ACP2P11117 423 aa12.08□□□□□ -0.48
CAPN1-207ENST00000527189 HPGDP15428 266 aa12.08□□□□□ -0.48
CAPN1-207ENST00000527189 ZNF17P17021 662 aa12.08□□□□□ -0.48
CAPN1-207ENST00000527189 HOXB4P17483 251 aaPredicted RBP12.08□□□□□ -0.48
CAPN1-207ENST00000527189 PRPS1L1P21108 318 aa12.08□□□□□ -0.48
CAPN1-207ENST00000527189 DNASE1P24855 282 aa12.08□□□□□ -0.48
CAPN1-207ENST00000527189 ETV4P43268 484 aa12.08□□□□□ -0.48
CAPN1-207ENST00000527189 CLDN15P56746 228 aa12.08□□□□□ -0.48
CAPN1-207ENST00000527189 MAD2L1Q13257 205 aaPredicted RBP12.08□□□□□ -0.48
CAPN1-207ENST00000527189 SMU1Q2TAY7 513 aa12.08□□□□□ -0.48
CAPN1-207ENST00000527189 LSM12Q3MHD2 195 aaKnown RBP12.08□□□□□ -0.48
CAPN1-207ENST00000527189 CPTPQ5TA50 214 aa12.08□□□□□ -0.48
CAPN1-207ENST00000527189 CAMKMTQ7Z624 323 aa12.08□□□□□ -0.48
CAPN1-207ENST00000527189 LUZP2Q86TE4 346 aa12.08□□□□□ -0.48
CAPN1-207ENST00000527189 EXOC3L1Q86VI1 746 aa12.08□□□□□ -0.48
CAPN1-207ENST00000527189 UBQLNLQ8IYU4 475 aa12.08□□□□□ -0.48
CAPN1-207ENST00000527189 GCNT2Q8N0V5 402 aa12.08□□□□□ -0.48
CAPN1-207ENST00000527189 METTL25Q8N6Q8 603 aa12.08□□□□□ -0.48
CAPN1-207ENST00000527189 CHDHQ8NE62 594 aaPredicted RBP12.08□□□□□ -0.48
CAPN1-207ENST00000527189 LINC01560Q8TB33 94 aa12.08□□□□□ -0.48
CAPN1-207ENST00000527189 OR5P2Q8WZ92 322 aa12.08□□□□□ -0.48
CAPN1-207ENST00000527189 ZBTB8AQ96BR9 441 aa12.08□□□□□ -0.48
CAPN1-207ENST00000527189 COQ8BQ96D53 544 aa12.08□□□□□ -0.48
CAPN1-207ENST00000527189 STARD4Q96DR4 205 aa12.08□□□□□ -0.48
CAPN1-207ENST00000527189 FAM120BQ96EK7 910 aaKnown RBP12.08□□□□□ -0.48
CAPN1-207ENST00000527189 BTBD2Q9BX70 525 aa12.08□□□□□ -0.48
CAPN1-207ENST00000527189 PIGUQ9H490 435 aa12.08□□□□□ -0.48
CAPN1-207ENST00000527189 RNF122Q9H9V4 155 aa12.08□□□□□ -0.48
CAPN1-207ENST00000527189 ZCCHC3Q9NUD5 404 aaKnown RBP12.08□□□□□ -0.48
CAPN1-207ENST00000527189 PAQR5Q9NXK6 330 aaPredicted RBP12.08□□□□□ -0.48
CAPN1-207ENST00000527189 GALNT8Q9NY28 637 aa12.08□□□□□ -0.48
CAPN1-207ENST00000527189 ZDHHC2Q9UIJ5 367 aa12.08□□□□□ -0.48
CAPN1-207ENST00000527189 MED12LQ86YW9 2145 aa12.08□□□□□ -0.48
CAPN1-207ENST00000527189 C7orf72A4D263 438 aa12.07□□□□□ -0.48
CAPN1-207ENST00000527189 SCDO00767 359 aa12.07□□□□□ -0.48
CAPN1-207ENST00000527189 CASKO14936 926 aa12.07□□□□□ -0.48
CAPN1-207ENST00000527189 HMGN2P05204 90 aaKnown RBP12.07□□□□□ -0.48
CAPN1-207ENST00000527189 KRT16P08779 473 aa12.07□□□□□ -0.48
CAPN1-207ENST00000527189 FCGR2AP12318 317 aa12.07□□□□□ -0.48
CAPN1-207ENST00000527189 TCEA1P23193 301 aaKnown RBP12.07□□□□□ -0.48
CAPN1-207ENST00000527189 SUCLG1P53597 346 aaKnown RBP12.07□□□□□ -0.48
CAPN1-207ENST00000527189 C21orf58P58505 322 aa12.07□□□□□ -0.48
CAPN1-207ENST00000527189 DUSP5Q16690 384 aa12.07□□□□□ -0.48
CAPN1-207ENST00000527189 FBXW10Q5XX13 1052 aa12.07□□□□□ -0.48
CAPN1-207ENST00000527189 ZCCHC23Q6ZST2 131 aa12.07□□□□□ -0.48
CAPN1-207ENST00000527189 SZRD1Q7Z422 152 aa12.07□□□□□ -0.48
CAPN1-207ENST00000527189 NUDCD3Q8IVD9 361 aa12.07□□□□□ -0.48
CAPN1-207ENST00000527189 COX18Q8N8Q8 333 aa12.07□□□□□ -0.48
CAPN1-207ENST00000527189 FNDC5Q8NAU1 212 aa12.07□□□□□ -0.48
CAPN1-207ENST00000527189 SMPDL3BQ92485 455 aa12.07□□□□□ -0.48
CAPN1-207ENST00000527189 NRGNQ92686 78 aa12.07□□□□□ -0.48
CAPN1-207ENST00000527189 MOAP1Q96BY2 351 aa12.07□□□□□ -0.48
CAPN1-207ENST00000527189 MBD6Q96DN6 1003 aa12.07□□□□□ -0.48
CAPN1-207ENST00000527189 C3orf30Q96M34 536 aa12.07□□□□□ -0.48
CAPN1-207ENST00000527189 YIPF4Q9BSR8 244 aa12.07□□□□□ -0.48
CAPN1-207ENST00000527189 HOXD1Q9GZZ0 328 aa12.07□□□□□ -0.48
CAPN1-207ENST00000527189 NEUROD4Q9HD90 331 aa12.07□□□□□ -0.48
CAPN1-207ENST00000527189 SSU72Q9NP77 194 aaKnown RBP12.07□□□□□ -0.48
CAPN1-207ENST00000527189 SIRT3Q9NTG7 399 aaPredicted RBP12.07□□□□□ -0.48
CAPN1-207ENST00000527189 CCM2LQ9NUG4 571 aaPredicted RBP12.07□□□□□ -0.48
CAPN1-207ENST00000527189 ELOVL5Q9NYP7 299 aa12.07□□□□□ -0.48
CAPN1-207ENST00000527189 EIF3LQ9Y262 564 aaKnown RBP12.07□□□□□ -0.48
CAPN1-207ENST00000527189 ACANP16112 2415 aa12.06□□□□□ -0.48
CAPN1-207ENST00000527189 SH3D21A4FU49 640 aa12.06□□□□□ -0.48
CAPN1-207ENST00000527189 H3BML4 177 aa12.06□□□□□ -0.48
CAPN1-207ENST00000527189 BIRC5O15392 142 aa12.06□□□□□ -0.48
CAPN1-207ENST00000527189 CD8BP10966 210 aa12.06□□□□□ -0.48
CAPN1-207ENST00000527189 LAMP1P11279 417 aa12.06□□□□□ -0.48
CAPN1-207ENST00000527189 CREB1P16220 341 aa12.06□□□□□ -0.48
CAPN1-207ENST00000527189 ARRB2P32121 409 aa12.06□□□□□ -0.48
CAPN1-207ENST00000527189 KIR2DL2P43627 348 aaPredicted RBP12.06□□□□□ -0.48
CAPN1-207ENST00000527189 CCT3P49368 545 aaKnown RBP12.06□□□□□ -0.48
CAPN1-207ENST00000527189 CLDN20P56880 219 aa12.06□□□□□ -0.48
CAPN1-207ENST00000527189 POU6F2P78424 691 aaPredicted RBP12.06□□□□□ -0.48
CAPN1-207ENST00000527189 EMX2Q04743 252 aa12.06□□□□□ -0.48
CAPN1-207ENST00000527189 PTGR1Q14914 329 aa12.06□□□□□ -0.48
CAPN1-207ENST00000527189 SGCBQ16585 318 aa12.06□□□□□ -0.48
CAPN1-207ENST00000527189 BEND6Q5SZJ8 279 aaPredicted RBP12.06□□□□□ -0.48
CAPN1-207ENST00000527189 IL23RQ5VWK5 629 aa12.06□□□□□ -0.48
CAPN1-207ENST00000527189 CDC73Q6P1J9 531 aa12.06□□□□□ -0.48
CAPN1-207ENST00000527189 BHLHB9Q6PI77 547 aa12.06□□□□□ -0.48
CAPN1-207ENST00000527189 FIGNL1Q6PIW4 674 aa12.06□□□□□ -0.48
CAPN1-207ENST00000527189 PLXDC2Q6UX71 529 aa12.06□□□□□ -0.48
CAPN1-207ENST00000527189 WDR75Q8IWA0 830 aaKnown RBP12.06□□□□□ -0.48
CAPN1-207ENST00000527189 RIMKLAQ8IXN7 391 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms