RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 TUBBP07437 444 aa16.76■□□□□ 0.27
CAPN1-203ENST00000525013 MYZAPP0CAP1 466 aa16.76■□□□□ 0.27
CAPN1-203ENST00000525013 CPA2P48052 419 aa16.76■□□□□ 0.27
CAPN1-203ENST00000525013 SLC1A6P48664 564 aa16.76■□□□□ 0.27
CAPN1-203ENST00000525013 EEFSECP57772 596 aaKnown RBP16.76■□□□□ 0.27
CAPN1-203ENST00000525013 EMX2Q04743 252 aa16.76■□□□□ 0.27
CAPN1-203ENST00000525013 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.76■□□□□ 0.27
CAPN1-203ENST00000525013 FLYWCH1Q4VC44 716 aa16.76■□□□□ 0.27
CAPN1-203ENST00000525013 CCNJQ5T5M9 372 aa16.76■□□□□ 0.27
CAPN1-203ENST00000525013 CROCCP2Q86T23 111 aa16.76■□□□□ 0.27
CAPN1-203ENST00000525013 LUZP2Q86TE4 346 aa16.76■□□□□ 0.27
CAPN1-203ENST00000525013 NATD1Q8N6N6 113 aa16.76■□□□□ 0.27
CAPN1-203ENST00000525013 OR56A1Q8NGH5 318 aa16.76■□□□□ 0.27
CAPN1-203ENST00000525013 FAM110BQ8TC76 370 aa16.76■□□□□ 0.27
CAPN1-203ENST00000525013 SMPDL3BQ92485 455 aa16.76■□□□□ 0.27
CAPN1-203ENST00000525013 CDS1Q92903 461 aa16.76■□□□□ 0.27
CAPN1-203ENST00000525013 COQ8BQ96D53 544 aa16.76■□□□□ 0.27
CAPN1-203ENST00000525013 DUSP26Q9BV47 211 aa16.76■□□□□ 0.27
CAPN1-203ENST00000525013 CXorf36Q9H7Y0 433 aa16.76■□□□□ 0.27
CAPN1-203ENST00000525013 HHATLQ9HCP6 504 aa16.76■□□□□ 0.27
CAPN1-203ENST00000525013 UBQLN4Q9NRR5 601 aa16.76■□□□□ 0.27
CAPN1-203ENST00000525013 DNAJB12Q9NXW2 375 aaKnown RBP16.76■□□□□ 0.27
CAPN1-203ENST00000525013 NOP53Q9NZM5 478 aaKnown RBP16.76■□□□□ 0.27
CAPN1-203ENST00000525013 FAF1Q9UNN5 650 aaPredicted RBP16.76■□□□□ 0.27
CAPN1-203ENST00000525013 RAP2CQ9Y3L5 183 aa16.76■□□□□ 0.27
CAPN1-203ENST00000525013 MAP1AP78559 2803 aaPredicted RBP16.76■□□□□ 0.27
CAPN1-203ENST00000525013 IGLV3-32A0A0A0MS00 114 aa16.75■□□□□ 0.27
CAPN1-203ENST00000525013 TUBAL3A6NHL2 446 aa16.75■□□□□ 0.27
CAPN1-203ENST00000525013 SHISA8B8ZZ34 492 aa16.75■□□□□ 0.27
CAPN1-203ENST00000525013 H0YC42 278 aa16.75■□□□□ 0.27
CAPN1-203ENST00000525013 NGFRP08138 427 aa16.75■□□□□ 0.27
CAPN1-203ENST00000525013 DHRS4L1P0CG22 281 aa16.75■□□□□ 0.27
CAPN1-203ENST00000525013 BGNP21810 368 aa16.75■□□□□ 0.27
CAPN1-203ENST00000525013 RPL14P50914 215 aaKnown RBP16.75■□□□□ 0.27
CAPN1-203ENST00000525013 SUCLG1P53597 346 aaKnown RBP16.75■□□□□ 0.27
CAPN1-203ENST00000525013 TPD52P55327 224 aaPredicted RBP16.75■□□□□ 0.27
CAPN1-203ENST00000525013 MPP2Q14168 576 aa16.75■□□□□ 0.27
CAPN1-203ENST00000525013 GLYR1Q49A26 553 aaPredicted RBP16.75■□□□□ 0.27
CAPN1-203ENST00000525013 RIMKLAQ8IXN7 391 aa16.75■□□□□ 0.27
CAPN1-203ENST00000525013 FAM222BQ8WU58 562 aa16.75■□□□□ 0.27
CAPN1-203ENST00000525013 SH3YL1Q96HL8 342 aaPredicted RBP16.75■□□□□ 0.27
CAPN1-203ENST00000525013 STACQ99469 402 aa16.75■□□□□ 0.27
CAPN1-203ENST00000525013 GPATCH1Q9BRR8 931 aaKnown RBP16.75■□□□□ 0.27
CAPN1-203ENST00000525013 RBM24Q9BX46 236 aaKnown RBP16.75■□□□□ 0.27
CAPN1-203ENST00000525013 POLDIP3Q9BY77 421 aaKnown RBP16.75■□□□□ 0.27
CAPN1-203ENST00000525013 ACTRT3Q9BYD9 372 aa16.75■□□□□ 0.27
CAPN1-203ENST00000525013 BHLHE41Q9C0J9 482 aaPredicted RBP16.75■□□□□ 0.27
CAPN1-203ENST00000525013 AKTIPQ9H8T0 292 aa16.75■□□□□ 0.27
CAPN1-203ENST00000525013 DUSP22Q9NRW4 184 aa16.75■□□□□ 0.27
CAPN1-203ENST00000525013 JKAMPQ9P055 326 aa16.75■□□□□ 0.27
CAPN1-203ENST00000525013 VDAC3Q9Y277 283 aa16.75■□□□□ 0.27
CAPN1-203ENST00000525013 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.75■□□□□ 0.27
CAPN1-203ENST00000525013 HRNRQ86YZ3 2850 aaPredicted RBP16.75■□□□□ 0.27
CAPN1-203ENST00000525013 HIVEP1P15822 2718 aa16.74■□□□□ 0.27
CAPN1-203ENST00000525013 SCDO00767 359 aa16.74■□□□□ 0.27
CAPN1-203ENST00000525013 HCRTR2O43614 444 aa16.74■□□□□ 0.27
CAPN1-203ENST00000525013 CTAG2O75638 210 aa16.74■□□□□ 0.27
CAPN1-203ENST00000525013 KRT16P08779 473 aa16.74■□□□□ 0.27
CAPN1-203ENST00000525013 ATP6V1C1P21283 382 aa16.74■□□□□ 0.27
CAPN1-203ENST00000525013 SOAT1P35610 550 aa16.74■□□□□ 0.27
CAPN1-203ENST00000525013 CLDN8P56748 225 aa16.74■□□□□ 0.27
CAPN1-203ENST00000525013 STX3Q13277 289 aa16.74■□□□□ 0.27
CAPN1-203ENST00000525013 EXOSC6Q5RKV6 272 aaKnown RBP16.74■□□□□ 0.27
CAPN1-203ENST00000525013 HHATQ5VTY9 493 aa16.74■□□□□ 0.27
CAPN1-203ENST00000525013 CDC73Q6P1J9 531 aa16.74■□□□□ 0.27
CAPN1-203ENST00000525013 PSMA8Q8TAA3 256 aa16.74■□□□□ 0.27
CAPN1-203ENST00000525013 LINC01560Q8TB33 94 aa16.74■□□□□ 0.27
CAPN1-203ENST00000525013 ADAMTS15Q8TE58 950 aa16.74■□□□□ 0.27
CAPN1-203ENST00000525013 NRGNQ92686 78 aa16.74■□□□□ 0.27
CAPN1-203ENST00000525013 PINK1Q9BXM7 581 aa16.74■□□□□ 0.27
CAPN1-203ENST00000525013 C20orf27Q9GZN8 174 aa16.74■□□□□ 0.27
CAPN1-203ENST00000525013 PIGUQ9H490 435 aa16.74■□□□□ 0.27
CAPN1-203ENST00000525013 STOML1Q9UBI4 398 aa16.74■□□□□ 0.27
CAPN1-203ENST00000525013 ACTL7BQ9Y614 415 aa16.74■□□□□ 0.27
CAPN1-203ENST00000525013 MED13LQ71F56 2210 aa16.73■□□□□ 0.27
CAPN1-203ENST00000525013 A0A1W2PNV4 684 aa16.73■□□□□ 0.27
CAPN1-203ENST00000525013 SNUPNO95149 360 aaKnown RBP16.73■□□□□ 0.27
CAPN1-203ENST00000525013 LCN1P31025 176 aa16.73■□□□□ 0.27
CAPN1-203ENST00000525013 CLDN15P56746 228 aa16.73■□□□□ 0.27
CAPN1-203ENST00000525013 CLDN20P56880 219 aa16.73■□□□□ 0.27
CAPN1-203ENST00000525013 RPS3AP61247 264 aaKnown RBP16.73■□□□□ 0.27
CAPN1-203ENST00000525013 EEF1A1P68104 462 aaKnown RBP16.73■□□□□ 0.27
CAPN1-203ENST00000525013 SMU1Q2TAY7 513 aa16.73■□□□□ 0.27
CAPN1-203ENST00000525013 TNFAIP8L3Q5GJ75 292 aa16.73■□□□□ 0.27
CAPN1-203ENST00000525013 EEF1A1P5Q5VTE0 462 aa16.73■□□□□ 0.27
CAPN1-203ENST00000525013 OR2A2Q6IF42 318 aa16.73■□□□□ 0.27
CAPN1-203ENST00000525013 CNEP1R1Q8N9A8 125 aa16.73■□□□□ 0.27
CAPN1-203ENST00000525013 ANKRD42Q8N9B4 389 aa16.73■□□□□ 0.27
CAPN1-203ENST00000525013 OR5AK3PQ8NH89 298 aa16.73■□□□□ 0.27
CAPN1-203ENST00000525013 SFXN5Q8TD22 340 aa16.73■□□□□ 0.27
CAPN1-203ENST00000525013 FIG4Q92562 907 aa16.73■□□□□ 0.27
CAPN1-203ENST00000525013 MOAP1Q96BY2 351 aa16.73■□□□□ 0.27
CAPN1-203ENST00000525013 PGM2Q96G03 612 aa16.73■□□□□ 0.27
CAPN1-203ENST00000525013 SORT1Q99523 831 aa16.73■□□□□ 0.27
CAPN1-203ENST00000525013 CLEC4MQ9H2X3 399 aaPredicted RBP16.73■□□□□ 0.27
CAPN1-203ENST00000525013 PIGMQ9H3S5 423 aa16.73■□□□□ 0.27
CAPN1-203ENST00000525013 NEUROD4Q9HD90 331 aa16.73■□□□□ 0.27
CAPN1-203ENST00000525013 GIN1Q9NXP7 522 aa16.73■□□□□ 0.27
CAPN1-203ENST00000525013 ASIC5Q9NY37 505 aa16.73■□□□□ 0.27
CAPN1-203ENST00000525013 PACSIN3Q9UKS6 424 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms