RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 Q9UFV3 132 aa16.19■□□□□ 0.18
CLK4-211ENST00000522556 BTNL2Q9UIR0 455 aa16.19■□□□□ 0.18
CLK4-211ENST00000522556 KCNE5Q9UJ90 142 aa16.19■□□□□ 0.18
CLK4-211ENST00000522556 NBPF19A0A087WUL8 3843 aa16.18■□□□□ 0.18
CLK4-211ENST00000522556 PRAMEF27A3QJZ7 478 aa16.18■□□□□ 0.18
CLK4-211ENST00000522556 NKX2-6A6NCS4 301 aa16.18■□□□□ 0.18
CLK4-211ENST00000522556 FAM90A27PA6NNH2 459 aa16.18■□□□□ 0.18
CLK4-211ENST00000522556 NPIPB9F8W1W9 429 aa16.18■□□□□ 0.18
CLK4-211ENST00000522556 H0YC42 278 aa16.18■□□□□ 0.18
CLK4-211ENST00000522556 SLC22A3O75751 556 aa16.18■□□□□ 0.18
CLK4-211ENST00000522556 NGFRP08138 427 aa16.18■□□□□ 0.18
CLK4-211ENST00000522556 OR12D1P0DN82 309 aa16.18■□□□□ 0.18
CLK4-211ENST00000522556 HK1P19367 917 aa16.18■□□□□ 0.18
CLK4-211ENST00000522556 UQCRC2P22695 453 aa16.18■□□□□ 0.18
CLK4-211ENST00000522556 HTR1EP28566 365 aa16.18■□□□□ 0.18
CLK4-211ENST00000522556 LHX2P50458 406 aa16.18■□□□□ 0.18
CLK4-211ENST00000522556 TPD52P55327 224 aaPredicted RBP16.18■□□□□ 0.18
CLK4-211ENST00000522556 SRYQ05066 204 aa16.18■□□□□ 0.18
CLK4-211ENST00000522556 ART3Q13508 389 aa16.18■□□□□ 0.18
CLK4-211ENST00000522556 TIGD2Q4W5G0 525 aa16.18■□□□□ 0.18
CLK4-211ENST00000522556 XKRXQ6PP77 449 aa16.18■□□□□ 0.18
CLK4-211ENST00000522556 HMGN2P46Q86SG4 172 aa16.18■□□□□ 0.18
CLK4-211ENST00000522556 LIX1LQ8IVB5 337 aa16.18■□□□□ 0.18
CLK4-211ENST00000522556 GOT1L1Q8NHS2 421 aaPredicted RBP16.18■□□□□ 0.18
CLK4-211ENST00000522556 PNPT1Q8TCS8 783 aaKnown RBP16.18■□□□□ 0.18
CLK4-211ENST00000522556 RND1Q92730 232 aa16.18■□□□□ 0.18
CLK4-211ENST00000522556 VPS33AQ96AX1 596 aa16.18■□□□□ 0.18
CLK4-211ENST00000522556 ZNF524Q96C55 264 aa16.18■□□□□ 0.18
CLK4-211ENST00000522556 C1GALT1C1Q96EU7 318 aa16.18■□□□□ 0.18
CLK4-211ENST00000522556 SFXN2Q96NB2 322 aa16.18■□□□□ 0.18
CLK4-211ENST00000522556 PANX1Q96RD7 426 aa16.18■□□□□ 0.18
CLK4-211ENST00000522556 SDF2Q99470 211 aa16.18■□□□□ 0.18
CLK4-211ENST00000522556 ZIM2Q9NZV7 527 aa16.18■□□□□ 0.18
CLK4-211ENST00000522556 PCDHGB4Q9UN71 923 aa16.18■□□□□ 0.18
CLK4-211ENST00000522556 HCFC1P51610 2035 aa16.18■□□□□ 0.18
CLK4-211ENST00000522556 IGLV3-32A0A0A0MS00 114 aa16.17■□□□□ 0.18
CLK4-211ENST00000522556 CCDC154A6NI56 674 aa16.17■□□□□ 0.18
CLK4-211ENST00000522556 POLR3GO15318 223 aaPredicted RBP16.17■□□□□ 0.18
CLK4-211ENST00000522556 NDUFB5O43674 189 aa16.17■□□□□ 0.18
CLK4-211ENST00000522556 FCMRO60667 390 aa16.17■□□□□ 0.18
CLK4-211ENST00000522556 TNFRSF21O75509 655 aa16.17■□□□□ 0.18
CLK4-211ENST00000522556 CLDN14O95500 239 aa16.17■□□□□ 0.18
CLK4-211ENST00000522556 DSCR4P56555 118 aaPredicted RBP16.17■□□□□ 0.18
CLK4-211ENST00000522556 CLDN18P56856 261 aa16.17■□□□□ 0.18
CLK4-211ENST00000522556 GSTA3Q16772 222 aa16.17■□□□□ 0.18
CLK4-211ENST00000522556 COX20Q5RI15 118 aa16.17■□□□□ 0.18
CLK4-211ENST00000522556 RAET1LQ5VY80 246 aa16.17■□□□□ 0.18
CLK4-211ENST00000522556 ACAD11Q709F0 780 aa16.17■□□□□ 0.18
CLK4-211ENST00000522556 RNF130Q86XS8 419 aa16.17■□□□□ 0.18
CLK4-211ENST00000522556 TNIP2Q8NFZ5 429 aa16.17■□□□□ 0.18
CLK4-211ENST00000522556 MIPOL1Q8TD10 442 aa16.17■□□□□ 0.18
CLK4-211ENST00000522556 NEURL3Q96EH8 262 aa16.17■□□□□ 0.18
CLK4-211ENST00000522556 DOCK7Q96N67 2140 aa16.17■□□□□ 0.18
CLK4-211ENST00000522556 ZBTB18Q99592 522 aa16.17■□□□□ 0.18
CLK4-211ENST00000522556 TUBA1CQ9BQE3 449 aa16.17■□□□□ 0.18
CLK4-211ENST00000522556 UBQLN4Q9NRR5 601 aa16.17■□□□□ 0.18
CLK4-211ENST00000522556 VDAC3Q9Y277 283 aa16.17■□□□□ 0.18
CLK4-211ENST00000522556 EDF1O60869 148 aaKnown RBP16.16■□□□□ 0.18
CLK4-211ENST00000522556 ACTL6AO96019 429 aa16.16■□□□□ 0.18
CLK4-211ENST00000522556 SNRPB2P08579 225 aaKnown RBP16.16■□□□□ 0.18
CLK4-211ENST00000522556 KRT16P08779 473 aa16.16■□□□□ 0.18
CLK4-211ENST00000522556 AGAP20933 346 aa16.16■□□□□ 0.18
CLK4-211ENST00000522556 CHI3L1P36222 383 aaPredicted RBP16.16■□□□□ 0.18
CLK4-211ENST00000522556 CLDN15P56746 228 aa16.16■□□□□ 0.18
CLK4-211ENST00000522556 ZNF117Q03924 483 aa16.16■□□□□ 0.18
CLK4-211ENST00000522556 C17orf67Q0P5P2 114 aa16.16■□□□□ 0.18
CLK4-211ENST00000522556 SF3A3Q12874 501 aaKnown RBP eCLIP16.16■□□□□ 0.18
CLK4-211ENST00000522556 ZNF630Q2M218 657 aaPredicted RBP16.16■□□□□ 0.18
CLK4-211ENST00000522556 FLYWCH1Q4VC44 716 aa16.16■□□□□ 0.18
CLK4-211ENST00000522556 TMEM211Q6ICI0 200 aa16.16■□□□□ 0.18
CLK4-211ENST00000522556 CBLN3Q6UW01 205 aa16.16■□□□□ 0.18
CLK4-211ENST00000522556 FUNDC1Q8IVP5 155 aa16.16■□□□□ 0.18
CLK4-211ENST00000522556 EID3Q8N140 333 aa16.16■□□□□ 0.18
CLK4-211ENST00000522556 MIER2Q8N344 545 aa16.16■□□□□ 0.18
CLK4-211ENST00000522556 CHDHQ8NE62 594 aaPredicted RBP16.16■□□□□ 0.18
CLK4-211ENST00000522556 VPS37AQ8NEZ2 397 aa16.16■□□□□ 0.18
CLK4-211ENST00000522556 OR10Q1Q8NGQ4 319 aa16.16■□□□□ 0.18
CLK4-211ENST00000522556 AURKBQ96GD4 344 aaPredicted RBP16.16■□□□□ 0.18
CLK4-211ENST00000522556 SDHAF3Q9NRP4 125 aa16.16■□□□□ 0.18
CLK4-211ENST00000522556 MKLN1Q9UL63 735 aa16.16■□□□□ 0.18
CLK4-211ENST00000522556 HEATR5AQ86XA9 2040 aa16.16■□□□□ 0.18
CLK4-211ENST00000522556 OR2M5A3KFT3 312 aa16.15■□□□□ 0.18
CLK4-211ENST00000522556 HMGN4O00479 90 aa16.15■□□□□ 0.18
CLK4-211ENST00000522556 BCAS1O75363 584 aaPredicted RBP16.15■□□□□ 0.18
CLK4-211ENST00000522556 TGDSO95455 350 aa16.15■□□□□ 0.18
CLK4-211ENST00000522556 GABRA1P14867 456 aa16.15■□□□□ 0.18
CLK4-211ENST00000522556 ZNF708P17019 499 aa16.15■□□□□ 0.18
CLK4-211ENST00000522556 ATP6V1C1P21283 382 aa16.15■□□□□ 0.18
CLK4-211ENST00000522556 CLK3P49761 638 aaKnown RBP16.15■□□□□ 0.18
CLK4-211ENST00000522556 POLR2JP52435 117 aaKnown RBP16.15■□□□□ 0.18
CLK4-211ENST00000522556 GPR68Q15743 365 aa16.15■□□□□ 0.18
CLK4-211ENST00000522556 KLHL26Q53HC5 615 aa16.15■□□□□ 0.18
CLK4-211ENST00000522556 SP5Q6BEB4 398 aaPredicted RBP16.15■□□□□ 0.18
CLK4-211ENST00000522556 HEPHL1Q6MZM0 1159 aa16.15■□□□□ 0.18
CLK4-211ENST00000522556 BHLHB9Q6PI77 547 aa16.15■□□□□ 0.18
CLK4-211ENST00000522556 SLC2A7Q6PXP3 512 aa16.15■□□□□ 0.18
CLK4-211ENST00000522556 ZNF621Q6ZSS3 439 aa16.15■□□□□ 0.18
CLK4-211ENST00000522556 ZNF614Q8N883 585 aa16.15■□□□□ 0.18
CLK4-211ENST00000522556 GLB1L3Q8NCI6 653 aaPredicted RBP16.15■□□□□ 0.18
CLK4-211ENST00000522556 CA5BP1Q8WTZ4 195 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms