RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 SNTA1Q13424 505 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 RAB30Q15771 203 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 PHF19Q5T6S3 580 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 NUDT8Q8WV74 236 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 OR10A4Q9H209 315 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 DUSP21Q9H596 190 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 ASB6Q9NWX5 421 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 KLHL9Q9P2J3 617 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 A0A1W2PPL8 197 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 CFIP05156 583 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 DHPSP49366 369 aaPredicted RBP13.01□□□□□ -0.33
SYNPO-205ENST00000522122 CTXN1P60606 82 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 LEG1Q6P5S2 330 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 PODNL1Q6PEZ8 512 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 DGLUCYQ7Z3D6 616 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 OR2T35Q8NGX2 323 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 STOML3Q8TAV4 291 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 TMEM239Q8WW34 195 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 GABARAPL3Q9BY60 117 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 PCDHGA6Q9Y5G7 932 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 H7C2Y5 167 aa13□□□□□ -0.33
SYNPO-205ENST00000522122 IGLV3-27P01718 113 aa13□□□□□ -0.33
SYNPO-205ENST00000522122 RPS5P46782 204 aaKnown RBP13□□□□□ -0.33
SYNPO-205ENST00000522122 ZNF91Q05481 1191 aa13□□□□□ -0.33
SYNPO-205ENST00000522122 BCL7AQ4VC05 210 aa13□□□□□ -0.33
SYNPO-205ENST00000522122 SPIN3Q5JUX0 258 aa13□□□□□ -0.33
SYNPO-205ENST00000522122 DEFB119Q8N690 84 aa13□□□□□ -0.33
SYNPO-205ENST00000522122 PEX11GQ96HA9 241 aa13□□□□□ -0.33
SYNPO-205ENST00000522122 SERINC2Q96SA4 455 aa13□□□□□ -0.33
SYNPO-205ENST00000522122 CYP8B1Q9UNU6 501 aa13□□□□□ -0.33
SYNPO-205ENST00000522122 DNMT3AQ9Y6K1 912 aaPredicted RBP13□□□□□ -0.33
SYNPO-205ENST00000522122 SSTR4P31391 388 aa13□□□□□ -0.33
SYNPO-205ENST00000522122 ZNF542PQ5EBM4 170 aa13□□□□□ -0.33
SYNPO-205ENST00000522122 OR5W2Q8NH69 310 aa13□□□□□ -0.33
SYNPO-205ENST00000522122 SAMD11Q96NU1 681 aa13□□□□□ -0.33
SYNPO-205ENST00000522122 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13□□□□□ -0.33
SYNPO-205ENST00000522122 SYT4Q9H2B2 425 aa13□□□□□ -0.33
SYNPO-205ENST00000522122 B3GAT2Q9NPZ5 323 aa13□□□□□ -0.33
SYNPO-205ENST00000522122 PCDHB16Q9NRJ7 776 aa13□□□□□ -0.33
SYNPO-205ENST00000522122 A0A1W2PQ09 198 aa13□□□□□ -0.33
SYNPO-205ENST00000522122 NARSO43776 548 aaKnown RBP13□□□□□ -0.33
SYNPO-205ENST00000522122 PTHP01270 115 aa13□□□□□ -0.33
SYNPO-205ENST00000522122 CHMP24386 653 aa13□□□□□ -0.33
SYNPO-205ENST00000522122 CTBP2P56545 445 aa13□□□□□ -0.33
SYNPO-205ENST00000522122 TRA2BP62995 288 aaKnown RBP13□□□□□ -0.33
SYNPO-205ENST00000522122 MLLT11Q13015 90 aaPredicted RBP13□□□□□ -0.33
SYNPO-205ENST00000522122 AIMP2Q13155 320 aaKnown RBP13□□□□□ -0.33
SYNPO-205ENST00000522122 FGFBP1Q14512 234 aa13□□□□□ -0.33
SYNPO-205ENST00000522122 SF3A2Q15428 464 aaKnown RBP13□□□□□ -0.33
SYNPO-205ENST00000522122 CTF1Q16619 201 aa13□□□□□ -0.33
SYNPO-205ENST00000522122 SPRYD4Q8WW59 207 aaPredicted RBP13□□□□□ -0.33
SYNPO-205ENST00000522122 TMEM185BQ9H7F4 350 aa13□□□□□ -0.33
SYNPO-205ENST00000522122 MEIOCA2RUB1 952 aa13□□□□□ -0.33
SYNPO-205ENST00000522122 NPC1O15118 1278 aa13□□□□□ -0.33
SYNPO-205ENST00000522122 SGSHP51688 502 aa13□□□□□ -0.33
SYNPO-205ENST00000522122 CLRN1P58418 232 aa13□□□□□ -0.33
SYNPO-205ENST00000522122 C6orf132Q5T0Z8 1188 aa13□□□□□ -0.33
SYNPO-205ENST00000522122 TMEM179BQ7Z7N9 219 aa13□□□□□ -0.33
SYNPO-205ENST00000522122 MEX3DQ86XN8 651 aaKnown RBP13□□□□□ -0.33
SYNPO-205ENST00000522122 FTMTQ8N4E7 242 aa13□□□□□ -0.33
SYNPO-205ENST00000522122 RASGEF1AQ8N9B8 481 aa13□□□□□ -0.33
SYNPO-205ENST00000522122 OR6C4Q8NGE1 309 aa13□□□□□ -0.33
SYNPO-205ENST00000522122 ZMYND19Q96E35 227 aaPredicted RBP13□□□□□ -0.33
SYNPO-205ENST00000522122 AIFM2Q9BRQ8 373 aa13□□□□□ -0.33
SYNPO-205ENST00000522122 URM1Q9BTM9 101 aaKnown RBP13□□□□□ -0.33
SYNPO-205ENST00000522122 DDX31Q9H8H2 851 aaKnown RBP13□□□□□ -0.33
SYNPO-205ENST00000522122 HCSTQ9UBK5 93 aa13□□□□□ -0.33
SYNPO-205ENST00000522122 PPT2Q9UMR5 302 aa13□□□□□ -0.33
SYNPO-205ENST00000522122 UGT2A1Q9Y4X1 527 aa13□□□□□ -0.33
SYNPO-205ENST00000522122 TCRBV21S2A2A0A5A6 115 aa12.99□□□□□ -0.33
SYNPO-205ENST00000522122 KLKB1P03952 638 aa12.99□□□□□ -0.33
SYNPO-205ENST00000522122 C1SP09871 688 aa12.99□□□□□ -0.33
SYNPO-205ENST00000522122 GPX2P18283 190 aa12.99□□□□□ -0.33
SYNPO-205ENST00000522122 SYPL1Q16563 259 aa12.99□□□□□ -0.33
SYNPO-205ENST00000522122 CDNFQ49AH0 187 aa12.99□□□□□ -0.33
SYNPO-205ENST00000522122 BEST3Q8N1M1 668 aa12.99□□□□□ -0.33
SYNPO-205ENST00000522122 ZNF565Q8N9K5 539 aa12.99□□□□□ -0.33
SYNPO-205ENST00000522122 LTB4R2Q9NPC1 389 aa12.99□□□□□ -0.33
SYNPO-205ENST00000522122 A0A1B0GVC2 190 aa12.99□□□□□ -0.33
SYNPO-205ENST00000522122 WASH3PC4AMC7 463 aa12.99□□□□□ -0.33
SYNPO-205ENST00000522122 J3KTA2 159 aa12.99□□□□□ -0.33
SYNPO-205ENST00000522122 MEN1O00255 615 aa12.99□□□□□ -0.33
SYNPO-205ENST00000522122 PHYHO14832 338 aa12.99□□□□□ -0.33
SYNPO-205ENST00000522122 IL1AP01583 271 aa12.99□□□□□ -0.33
SYNPO-205ENST00000522122 HEXBP07686 556 aa12.99□□□□□ -0.33
SYNPO-205ENST00000522122 AGTR1P30556 359 aa12.99□□□□□ -0.33
SYNPO-205ENST00000522122 HES5Q5TA89 166 aa12.99□□□□□ -0.33
SYNPO-205ENST00000522122 TGM7Q96PF1 710 aa12.99□□□□□ -0.33
SYNPO-205ENST00000522122 SLC6A7Q99884 636 aa12.99□□□□□ -0.33
SYNPO-205ENST00000522122 APOBEC3BQ9UH17 382 aaKnown RBP12.99□□□□□ -0.33
SYNPO-205ENST00000522122 FAM221BA6H8Z2 402 aa12.99□□□□□ -0.33
SYNPO-205ENST00000522122 FOXE1O00358 373 aaPredicted RBP12.99□□□□□ -0.33
SYNPO-205ENST00000522122 TSPAN12O95859 305 aa12.99□□□□□ -0.33
SYNPO-205ENST00000522122 RNASE10Q5GAN6 216 aaKnown RBP12.99□□□□□ -0.33
SYNPO-205ENST00000522122 TMEM205Q6UW68 189 aa12.99□□□□□ -0.33
SYNPO-205ENST00000522122 HORMAD2Q8N7B1 307 aa12.99□□□□□ -0.33
SYNPO-205ENST00000522122 OR4C15Q8NGM1 316 aa12.99□□□□□ -0.33
SYNPO-205ENST00000522122 ADAMTS18Q8TE60 1221 aa12.99□□□□□ -0.33
SYNPO-205ENST00000522122 NEURL2Q9BR09 285 aa12.99□□□□□ -0.33
SYNPO-205ENST00000522122 CENPOQ9BU64 300 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms