RNA–Protein interactions for RNA: ENST00000521167.1

TRAPPC9-209, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-209ENST00000521167 IGKV1D-16P01601 117 aa9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 HMGN2P05204 90 aaKnown RBP9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 EFNA1P20827 205 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 LORP23490 312 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 MSX1P28360 303 aa9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 ADH7P40394 386 aa9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 RFX3P48380 749 aa9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 CLNS1AP54105 237 aaKnown RBP9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 POU6F2P78424 691 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 TFF3Q07654 80 aa9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 RCAN2Q14206 197 aa9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 DUSP5Q16690 384 aa9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 DPY19L1Q2PZI1 675 aa9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 PGS1Q32NB8 556 aa9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 GRAMD1BQ3KR37 738 aa9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 ANXA8L1Q5VT79 327 aa9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 OR5M10Q6IEU7 315 aa9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 OGFOD2Q6N063 350 aa9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 SEM1Q6ZVN7 128 aa9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 SZRD1Q7Z422 152 aa9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 SPATA19Q7Z5L4 167 aa9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 MARCH3Q86UD3 253 aa9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 MCEMP1Q8IX19 187 aa9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 COX18Q8N8Q8 333 aa9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 VPS37AQ8NEZ2 397 aa9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 GOT1L1Q8NHS2 421 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 MGARPQ8TDB4 240 aa9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 ADAMTS15Q8TE58 950 aa9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 TESCQ96BS2 214 aa9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 PPP1R36Q96LQ0 422 aa9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 SFXN2Q96NB2 322 aa9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 UCN2Q96RP3 112 aa9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 TBL1XR1Q9BZK7 514 aa9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 UCK2Q9BZX2 261 aa9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 HOXD1Q9GZZ0 328 aa9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 CXorf36Q9H7Y0 433 aa9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 MANSC1Q9H8J5 431 aa9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 UBQLN4Q9NRR5 601 aa9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 FLRT3Q9NZU0 649 aa9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 ZNF629Q9UEG4 869 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 DKKL1Q9UK85 242 aa9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 PCDHGB4Q9UN71 923 aa9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 FAF1Q9UNN5 650 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 SNX8Q9Y5X2 465 aa9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 SPG11Q96JI7 2443 aa9.44□□□□□ -0.9
TRAPPC9-209ENST00000521167 ABCA4P78363 2273 aa9.43□□□□□ -0.9
TRAPPC9-209ENST00000521167 PRSS51A0A1B0GVH4 220 aa9.43□□□□□ -0.9
TRAPPC9-209ENST00000521167 A0A1W2PQD3 144 aa9.43□□□□□ -0.9
TRAPPC9-209ENST00000521167 NKX2-6A6NCS4 301 aa9.43□□□□□ -0.9
TRAPPC9-209ENST00000521167 DUXAA6NLW8 204 aa9.43□□□□□ -0.9
TRAPPC9-209ENST00000521167 FAM90A27PA6NNH2 459 aa9.43□□□□□ -0.9
TRAPPC9-209ENST00000521167 HMGB1P1B2RPK0 211 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC9-209ENST00000521167 SDHDO14521 159 aa9.43□□□□□ -0.9
TRAPPC9-209ENST00000521167 DVL2O14641 736 aa9.43□□□□□ -0.9
TRAPPC9-209ENST00000521167 KLF11O14901 512 aa9.43□□□□□ -0.9
TRAPPC9-209ENST00000521167 ANKRD28O15084 1053 aa9.43□□□□□ -0.9
TRAPPC9-209ENST00000521167 ANGPTL1O95841 491 aa9.43□□□□□ -0.9
TRAPPC9-209ENST00000521167 PEPDP12955 493 aa9.43□□□□□ -0.9
TRAPPC9-209ENST00000521167 WNT3P56703 355 aa9.43□□□□□ -0.9
TRAPPC9-209ENST00000521167 B3GALT5-AS1P59052 145 aa9.43□□□□□ -0.9
TRAPPC9-209ENST00000521167 HBA1P69905 142 aa9.43□□□□□ -0.9
TRAPPC9-209ENST00000521167 OCRLQ01968 901 aa9.43□□□□□ -0.9
TRAPPC9-209ENST00000521167 TP53BP2Q13625 1128 aa9.43□□□□□ -0.9
TRAPPC9-209ENST00000521167 LASP1Q14847 261 aaKnown RBP9.43□□□□□ -0.9
TRAPPC9-209ENST00000521167 SPDYE7PQ495Y7 208 aa9.43□□□□□ -0.9
TRAPPC9-209ENST00000521167 DCST1Q5T197 706 aa9.43□□□□□ -0.9
TRAPPC9-209ENST00000521167 OR4F3Q6IEY1 312 aa9.43□□□□□ -0.9
TRAPPC9-209ENST00000521167 FIGNL1Q6PIW4 674 aa9.43□□□□□ -0.9
TRAPPC9-209ENST00000521167 APOOLQ6UXV4 268 aa9.43□□□□□ -0.9
TRAPPC9-209ENST00000521167 MEX3BQ6ZN04 569 aaKnown RBP9.43□□□□□ -0.9
TRAPPC9-209ENST00000521167 GDF7Q7Z4P5 450 aa9.43□□□□□ -0.9
TRAPPC9-209ENST00000521167 ADGRE4PQ86SQ3 457 aa9.43□□□□□ -0.9
TRAPPC9-209ENST00000521167 MISPQ8IVT2 679 aa9.43□□□□□ -0.9
TRAPPC9-209ENST00000521167 NUDT8Q8WV74 236 aa9.43□□□□□ -0.9
TRAPPC9-209ENST00000521167 YIPF4Q9BSR8 244 aa9.43□□□□□ -0.9
TRAPPC9-209ENST00000521167 MED4Q9NPJ6 270 aa9.43□□□□□ -0.9
TRAPPC9-209ENST00000521167 GPATCH2Q9NW75 528 aa9.43□□□□□ -0.9
TRAPPC9-209ENST00000521167 MED11Q9P086 117 aa9.43□□□□□ -0.9
TRAPPC9-209ENST00000521167 LRBAP50851 2863 aa9.42□□□□□ -0.9
TRAPPC9-209ENST00000521167 A0A087WZY1 265 aa9.42□□□□□ -0.9
TRAPPC9-209ENST00000521167 MBD3L4A6NDZ8 208 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC9-209ENST00000521167 MBD3L3A6NE82 208 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC9-209ENST00000521167 MBD3L5A6NJ08 208 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC9-209ENST00000521167 B4DXG7 233 aa9.42□□□□□ -0.9
TRAPPC9-209ENST00000521167 H0Y3Z8 333 aa9.42□□□□□ -0.9
TRAPPC9-209ENST00000521167 NDUFB5O43674 189 aa9.42□□□□□ -0.9
TRAPPC9-209ENST00000521167 SCN2BO60939 215 aa9.42□□□□□ -0.9
TRAPPC9-209ENST00000521167 OXSR1O95747 527 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC9-209ENST00000521167 IL18BPO95998 194 aa9.42□□□□□ -0.9
TRAPPC9-209ENST00000521167 SNRPB2P08579 225 aaKnown RBP9.42□□□□□ -0.9
TRAPPC9-209ENST00000521167 PRF1P14222 555 aa9.42□□□□□ -0.9
TRAPPC9-209ENST00000521167 HPGDP15428 266 aa9.42□□□□□ -0.9
TRAPPC9-209ENST00000521167 ZNF708P17019 499 aa9.42□□□□□ -0.9
TRAPPC9-209ENST00000521167 IGFBP2P18065 325 aa9.42□□□□□ -0.9
TRAPPC9-209ENST00000521167 HK1P19367 917 aa9.42□□□□□ -0.9
TRAPPC9-209ENST00000521167 SSTR2P30874 369 aa9.42□□□□□ -0.9
TRAPPC9-209ENST00000521167 PEX19P40855 299 aa9.42□□□□□ -0.9
TRAPPC9-209ENST00000521167 STARP49675 285 aa9.42□□□□□ -0.9
TRAPPC9-209ENST00000521167 LHX2P50458 406 aa9.42□□□□□ -0.9
TRAPPC9-209ENST00000521167 CLDN18P56856 261 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms