RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 OGFOD2Q6N063 350 aa12.85□□□□□ -0.35
VEGFA-221ENST00000520265 TNFAIP8L2Q6P589 184 aaPredicted RBP12.85□□□□□ -0.35
VEGFA-221ENST00000520265 DNAJC14Q6Y2X3 702 aaPredicted RBP12.85□□□□□ -0.35
VEGFA-221ENST00000520265 C6orf120Q7Z4R8 191 aa12.85□□□□□ -0.35
VEGFA-221ENST00000520265 MEIOBQ8N635 442 aa12.85□□□□□ -0.35
VEGFA-221ENST00000520265 PHOSPHO1Q8TCT1 267 aa12.85□□□□□ -0.35
VEGFA-221ENST00000520265 TESCQ96BS2 214 aa12.85□□□□□ -0.35
VEGFA-221ENST00000520265 C1GALT1C1Q96EU7 318 aa12.85□□□□□ -0.35
VEGFA-221ENST00000520265 OR52E6Q96RD3 313 aa12.85□□□□□ -0.35
VEGFA-221ENST00000520265 PANX1Q96RD7 426 aa12.85□□□□□ -0.35
VEGFA-221ENST00000520265 TUBA1CQ9BQE3 449 aa12.85□□□□□ -0.35
VEGFA-221ENST00000520265 SLC35A5Q9BS91 424 aa12.85□□□□□ -0.35
VEGFA-221ENST00000520265 INTS9Q9NV88 658 aaKnown RBP12.85□□□□□ -0.35
VEGFA-221ENST00000520265 CACNA1CQ13936 2221 aa12.85□□□□□ -0.35
VEGFA-221ENST00000520265 PRSS51A0A1B0GVH4 220 aa12.84□□□□□ -0.35
VEGFA-221ENST00000520265 CLCA1A8K7I4 914 aa12.84□□□□□ -0.35
VEGFA-221ENST00000520265 HMGB1P1B2RPK0 211 aaPredicted RBP12.84□□□□□ -0.35
VEGFA-221ENST00000520265 ALG1L2C9J202 215 aa12.84□□□□□ -0.35
VEGFA-221ENST00000520265 H3BNH8 94 aa12.84□□□□□ -0.35
VEGFA-221ENST00000520265 GTPBP1O00178 669 aaKnown RBP12.84□□□□□ -0.35
VEGFA-221ENST00000520265 HCRTR2O43614 444 aa12.84□□□□□ -0.35
VEGFA-221ENST00000520265 CYP7B1O75881 506 aa12.84□□□□□ -0.35
VEGFA-221ENST00000520265 EPPINO95925 133 aa12.84□□□□□ -0.35
VEGFA-221ENST00000520265 TBXA2RP21731 343 aa12.84□□□□□ -0.35
VEGFA-221ENST00000520265 UQCRC1P31930 480 aa12.84□□□□□ -0.35
VEGFA-221ENST00000520265 NSUN5P2Q63ZY6 315 aa12.84□□□□□ -0.35
VEGFA-221ENST00000520265 PLXDC2Q6UX71 529 aa12.84□□□□□ -0.35
VEGFA-221ENST00000520265 APOOLQ6UXV4 268 aa12.84□□□□□ -0.35
VEGFA-221ENST00000520265 GDF7Q7Z4P5 450 aa12.84□□□□□ -0.35
VEGFA-221ENST00000520265 LRRC34Q8IZ02 419 aa12.84□□□□□ -0.35
VEGFA-221ENST00000520265 FADS6Q8N9I5 356 aa12.84□□□□□ -0.35
VEGFA-221ENST00000520265 OR8J2Q8NGG1 315 aa12.84□□□□□ -0.35
VEGFA-221ENST00000520265 RNF138Q8WVD3 245 aa12.84□□□□□ -0.35
VEGFA-221ENST00000520265 LRRC46Q96FV0 321 aa12.84□□□□□ -0.35
VEGFA-221ENST00000520265 TEX37Q96LM6 180 aa12.84□□□□□ -0.35
VEGFA-221ENST00000520265 PIGQQ9BRB3 760 aa12.84□□□□□ -0.35
VEGFA-221ENST00000520265 OR51I1Q9H343 314 aa12.84□□□□□ -0.35
VEGFA-221ENST00000520265 ACBD3Q9H3P7 528 aa12.84□□□□□ -0.35
VEGFA-221ENST00000520265 EXD2Q9NVH0 621 aa12.84□□□□□ -0.35
VEGFA-221ENST00000520265 GPATCH2Q9NW75 528 aa12.84□□□□□ -0.35
VEGFA-221ENST00000520265 KCNE3Q9Y6H6 103 aa12.84□□□□□ -0.35
VEGFA-221ENST00000520265 USH1CQ9Y6N9 552 aa12.84□□□□□ -0.35
VEGFA-221ENST00000520265 MED12Q93074 2177 aa12.83□□□□□ -0.36
VEGFA-221ENST00000520265 DUXAA6NLW8 204 aa12.83□□□□□ -0.36
VEGFA-221ENST00000520265 UBDO15205 165 aa12.83□□□□□ -0.36
VEGFA-221ENST00000520265 POLR3GO15318 223 aaPredicted RBP12.83□□□□□ -0.36
VEGFA-221ENST00000520265 ZIC3O60481 467 aa12.83□□□□□ -0.36
VEGFA-221ENST00000520265 ANP32DO95626 131 aa12.83□□□□□ -0.36
VEGFA-221ENST00000520265 TMIGD3P0DMS9 266 aaPredicted RBP12.83□□□□□ -0.36
VEGFA-221ENST00000520265 PEPDP12955 493 aa12.83□□□□□ -0.36
VEGFA-221ENST00000520265 IDO1P14902 403 aa12.83□□□□□ -0.36
VEGFA-221ENST00000520265 H2AFXP16104 143 aaPredicted RBP12.83□□□□□ -0.36
VEGFA-221ENST00000520265 UQCRC2P22695 453 aa12.83□□□□□ -0.36
VEGFA-221ENST00000520265 CHMP24386 653 aa12.83□□□□□ -0.36
VEGFA-221ENST00000520265 MAP3K8P41279 467 aa12.83□□□□□ -0.36
VEGFA-221ENST00000520265 KHKP50053 298 aa12.83□□□□□ -0.36
VEGFA-221ENST00000520265 LHX2P50458 406 aa12.83□□□□□ -0.36
VEGFA-221ENST00000520265 GFRA1P56159 465 aa12.83□□□□□ -0.36
VEGFA-221ENST00000520265 STX1BP61266 288 aa12.83□□□□□ -0.36
VEGFA-221ENST00000520265 PPP2R2AP63151 447 aa12.83□□□□□ -0.36
VEGFA-221ENST00000520265 MYBPHQ13203 477 aa12.83□□□□□ -0.36
VEGFA-221ENST00000520265 GPR68Q15743 365 aa12.83□□□□□ -0.36
VEGFA-221ENST00000520265 SLC25A35Q3KQZ1 300 aa12.83□□□□□ -0.36
VEGFA-221ENST00000520265 ARSKQ6UWY0 536 aa12.83□□□□□ -0.36
VEGFA-221ENST00000520265 ZNF621Q6ZSS3 439 aa12.83□□□□□ -0.36
VEGFA-221ENST00000520265 SEM1Q6ZVN7 128 aa12.83□□□□□ -0.36
VEGFA-221ENST00000520265 LIX1LQ8IVB5 337 aa12.83□□□□□ -0.36
VEGFA-221ENST00000520265 MISPQ8IVT2 679 aa12.83□□□□□ -0.36
VEGFA-221ENST00000520265 TRIML2Q8N7C3 387 aa12.83□□□□□ -0.36
VEGFA-221ENST00000520265 C9orf106Q8NAJ2 232 aa12.83□□□□□ -0.36
VEGFA-221ENST00000520265 B4GALNT2Q8NHY0 566 aa12.83□□□□□ -0.36
VEGFA-221ENST00000520265 PSMA8Q8TAA3 256 aa12.83□□□□□ -0.36
VEGFA-221ENST00000520265 PNPT1Q8TCS8 783 aaKnown RBP12.83□□□□□ -0.36
VEGFA-221ENST00000520265 XAGE5Q8WWM1 108 aa12.83□□□□□ -0.36
VEGFA-221ENST00000520265 HOXB13Q92826 284 aaPredicted RBP12.83□□□□□ -0.36
VEGFA-221ENST00000520265 NTNG2Q96CW9 530 aa12.83□□□□□ -0.36
VEGFA-221ENST00000520265 OR52B2Q96RD2 323 aa12.83□□□□□ -0.36
VEGFA-221ENST00000520265 HHATLQ9HCP6 504 aa12.83□□□□□ -0.36
VEGFA-221ENST00000520265 ARHGAP21Q5T5U3 1957 aa12.83□□□□□ -0.36
VEGFA-221ENST00000520265 NUP214P35658 2090 aaPredicted RBP12.82□□□□□ -0.36
VEGFA-221ENST00000520265 CACNA1DQ01668 2161 aa12.82□□□□□ -0.36
VEGFA-221ENST00000520265 OR2M5A3KFT3 312 aa12.82□□□□□ -0.36
VEGFA-221ENST00000520265 CD8B2A6NJW9 211 aa12.82□□□□□ -0.36
VEGFA-221ENST00000520265 B4DXG7 233 aa12.82□□□□□ -0.36
VEGFA-221ENST00000520265 KLF11O14901 512 aa12.82□□□□□ -0.36
VEGFA-221ENST00000520265 ANKRD28O15084 1053 aa12.82□□□□□ -0.36
VEGFA-221ENST00000520265 SLC22A3O75751 556 aa12.82□□□□□ -0.36
VEGFA-221ENST00000520265 TOXO94900 526 aa12.82□□□□□ -0.36
VEGFA-221ENST00000520265 SOX30O94993 753 aa12.82□□□□□ -0.36
VEGFA-221ENST00000520265 GSNP06396 782 aa12.82□□□□□ -0.36
VEGFA-221ENST00000520265 PGRP06401 933 aa12.82□□□□□ -0.36
VEGFA-221ENST00000520265 OR12D1P0DN82 309 aa12.82□□□□□ -0.36
VEGFA-221ENST00000520265 PRF1P14222 555 aa12.82□□□□□ -0.36
VEGFA-221ENST00000520265 CPN1P15169 458 aa12.82□□□□□ -0.36
VEGFA-221ENST00000520265 LCN1P31025 176 aa12.82□□□□□ -0.36
VEGFA-221ENST00000520265 CPA2P48052 419 aa12.82□□□□□ -0.36
VEGFA-221ENST00000520265 CD226Q15762 336 aa12.82□□□□□ -0.36
VEGFA-221ENST00000520265 SGCBQ16585 318 aa12.82□□□□□ -0.36
VEGFA-221ENST00000520265 NDUFAF6Q330K2 333 aa12.82□□□□□ -0.36
VEGFA-221ENST00000520265 GPAT3Q53EU6 434 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms