RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 SMIM10Q96HG1 83 aa17.09■□□□□ 0.33
SDC2-202ENST00000518385 OR2A5Q96R48 311 aa17.09■□□□□ 0.33
SDC2-202ENST00000518385 ABCG4Q9H172 646 aa17.09■□□□□ 0.33
SDC2-202ENST00000518385 GLIPR2Q9H4G4 154 aa17.09■□□□□ 0.33
SDC2-202ENST00000518385 C11orf16Q9NQ32 467 aa17.09■□□□□ 0.33
SDC2-202ENST00000518385 PILRAQ9UKJ1 303 aa17.09■□□□□ 0.33
SDC2-202ENST00000518385 CES1P1Q9UKY3 287 aa17.09■□□□□ 0.33
SDC2-202ENST00000518385 ENTPD4Q9Y227 616 aa17.09■□□□□ 0.33
SDC2-202ENST00000518385 CARD8Q9Y2G2 431 aa17.09■□□□□ 0.33
SDC2-202ENST00000518385 TRBV23OR9-2A0A075B6M9 112 aa17.08■□□□□ 0.32
SDC2-202ENST00000518385 TRBV4-1A0A0J9YWV2 114 aa17.08■□□□□ 0.32
SDC2-202ENST00000518385 A0A1W2PR48 441 aa17.08■□□□□ 0.32
SDC2-202ENST00000518385 H3BN98 237 aa17.08■□□□□ 0.32
SDC2-202ENST00000518385 PRODHO43272 600 aa17.08■□□□□ 0.32
SDC2-202ENST00000518385 SH3BP5O60239 455 aa17.08■□□□□ 0.32
SDC2-202ENST00000518385 ADRA2AP08913 450 aa17.08■□□□□ 0.32
SDC2-202ENST00000518385 CSNK2A2P19784 350 aaPredicted RBP17.08■□□□□ 0.32
SDC2-202ENST00000518385 ALAS2P22557 587 aa17.08■□□□□ 0.32
SDC2-202ENST00000518385 MPIP34949 423 aa17.08■□□□□ 0.32
SDC2-202ENST00000518385 HSPB3Q12988 150 aa17.08■□□□□ 0.32
SDC2-202ENST00000518385 TARDBPQ13148 414 aaKnown RBP eCLIP17.08■□□□□ 0.32
SDC2-202ENST00000518385 MAB21L1Q13394 359 aa17.08■□□□□ 0.32
SDC2-202ENST00000518385 PUM1Q14671 1186 aaKnown RBP eCLIP17.08■□□□□ 0.32
SDC2-202ENST00000518385 GANABQ14697 944 aaKnown RBP17.08■□□□□ 0.32
SDC2-202ENST00000518385 ZNF782Q6ZMW2 699 aaPredicted RBP17.08■□□□□ 0.32
SDC2-202ENST00000518385 DTWD2Q8NBA8 298 aa17.08■□□□□ 0.32
SDC2-202ENST00000518385 VANGL1Q8TAA9 524 aaPredicted RBP17.08■□□□□ 0.32
SDC2-202ENST00000518385 IL4I1Q96RQ9 567 aa17.08■□□□□ 0.32
SDC2-202ENST00000518385 SERINC2Q96SA4 455 aa17.08■□□□□ 0.32
SDC2-202ENST00000518385 TEX12Q9BXU0 123 aa17.08■□□□□ 0.32
SDC2-202ENST00000518385 RANGRFQ9HD47 186 aaPredicted RBP17.08■□□□□ 0.32
SDC2-202ENST00000518385 DNAJC27Q9NZQ0 273 aa17.08■□□□□ 0.32
SDC2-202ENST00000518385 NUFIP1Q9UHK0 495 aaKnown RBP17.08■□□□□ 0.32
SDC2-202ENST00000518385 ATG4BQ9Y4P1 393 aa17.08■□□□□ 0.32
SDC2-202ENST00000518385 FANCMQ8IYD8 2048 aa17.08■□□□□ 0.32
SDC2-202ENST00000518385 THADAQ6YHU6 1953 aa17.07■□□□□ 0.32
SDC2-202ENST00000518385 A0A0G2JN53 185 aa17.07■□□□□ 0.32
SDC2-202ENST00000518385 A0A0J9YY10 115 aa17.07■□□□□ 0.32
SDC2-202ENST00000518385 GSAPA4D1B5 854 aa17.07■□□□□ 0.32
SDC2-202ENST00000518385 AP3D1O14617 1153 aa17.07■□□□□ 0.32
SDC2-202ENST00000518385 FFAR1O14842 300 aa17.07■□□□□ 0.32
SDC2-202ENST00000518385 PPM1DO15297 605 aa17.07■□□□□ 0.32
SDC2-202ENST00000518385 BCAT2O15382 392 aaPredicted RBP17.07■□□□□ 0.32
SDC2-202ENST00000518385 MSL3P1P0C860 447 aa17.07■□□□□ 0.32
SDC2-202ENST00000518385 NME1P15531 152 aaKnown RBP17.07■□□□□ 0.32
SDC2-202ENST00000518385 POLR2CP19387 275 aaPredicted RBP17.07■□□□□ 0.32
SDC2-202ENST00000518385 GPC1P35052 558 aa17.07■□□□□ 0.32
SDC2-202ENST00000518385 LIM2P55344 173 aa17.07■□□□□ 0.32
SDC2-202ENST00000518385 NXPH1P58417 271 aa17.07■□□□□ 0.32
SDC2-202ENST00000518385 EFNB1P98172 346 aa17.07■□□□□ 0.32
SDC2-202ENST00000518385 CDK5Q00535 292 aa17.07■□□□□ 0.32
SDC2-202ENST00000518385 MINDY4Q4G0A6 757 aa17.07■□□□□ 0.32
SDC2-202ENST00000518385 HSD17B12Q53GQ0 312 aa17.07■□□□□ 0.32
SDC2-202ENST00000518385 PRAMEF8Q5VWM4 474 aa17.07■□□□□ 0.32
SDC2-202ENST00000518385 PRAMEF7Q5VXH5 474 aa17.07■□□□□ 0.32
SDC2-202ENST00000518385 FCRL6Q6DN72 434 aa17.07■□□□□ 0.32
SDC2-202ENST00000518385 TCTN3Q6NUS6 607 aa17.07■□□□□ 0.32
SDC2-202ENST00000518385 CDH24Q86UP0 819 aa17.07■□□□□ 0.32
SDC2-202ENST00000518385 TCEANCQ8N8B7 351 aa17.07■□□□□ 0.32
SDC2-202ENST00000518385 OR56A1Q8NGH5 318 aa17.07■□□□□ 0.32
SDC2-202ENST00000518385 HYLS1Q96M11 299 aa17.07■□□□□ 0.32
SDC2-202ENST00000518385 DMRTB1Q96MA1 342 aa17.07■□□□□ 0.32
SDC2-202ENST00000518385 ZFYVE21Q9BQ24 234 aa17.07■□□□□ 0.32
SDC2-202ENST00000518385 TTYH2Q9BSA4 534 aa17.07■□□□□ 0.32
SDC2-202ENST00000518385 MARVELD1Q9BSK0 173 aa17.07■□□□□ 0.32
SDC2-202ENST00000518385 JAM3Q9BX67 310 aa17.07■□□□□ 0.32
SDC2-202ENST00000518385 FOLH1BQ9HBA9 442 aa17.07■□□□□ 0.32
SDC2-202ENST00000518385 ASB6Q9NWX5 421 aa17.07■□□□□ 0.32
SDC2-202ENST00000518385 CLEC2DQ9UHP7 191 aa17.07■□□□□ 0.32
SDC2-202ENST00000518385 FBXO4Q9UKT5 387 aa17.07■□□□□ 0.32
SDC2-202ENST00000518385 SLC9A8Q9Y2E8 581 aa17.07■□□□□ 0.32
SDC2-202ENST00000518385 C4orf51C9J302 202 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 PLA2G10O15496 165 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 ZNF780AO75290 641 aaPredicted RBP17.06■□□□□ 0.32
SDC2-202ENST00000518385 AIFM1O95831 613 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 SLC2A2P11168 524 aaPredicted RBP17.06■□□□□ 0.32
SDC2-202ENST00000518385 HOXB3P14651 431 aaPredicted RBP17.06■□□□□ 0.32
SDC2-202ENST00000518385 BUD31P41223 144 aaPredicted RBP17.06■□□□□ 0.32
SDC2-202ENST00000518385 KIR2DL3P43628 341 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 CSNK1EP49674 416 aaKnown RBP17.06■□□□□ 0.32
SDC2-202ENST00000518385 AFF3P51826 1226 aaKnown RBP17.06■□□□□ 0.32
SDC2-202ENST00000518385 NCBP2P52298 156 aaKnown RBP eCLIP17.06■□□□□ 0.321e-8■□□□□ 8.1
SDC2-202ENST00000518385 BTN3A2P78410 334 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 TP53BP2Q13625 1128 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 DSG2Q14126 1118 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 ZMAT1Q5H9K5 638 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 LIPKQ5VXJ0 399 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 C1orf94Q6P1W5 598 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 ABHD13Q7L211 337 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 OOSP2Q86WS3 158 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 SDR16C5Q8N3Y7 309 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 HORMAD2Q8N7B1 307 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 BAHD1Q8TBE0 780 aaPredicted RBP17.06■□□□□ 0.32
SDC2-202ENST00000518385 SLC37A2Q8TED4 501 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 RFKQ969G6 155 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 CREB3L1Q96BA8 519 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 SLC35G5Q96KT7 338 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 SLC38A2Q96QD8 506 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 MMP28Q9H239 520 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 ANKRD19PQ9H560 264 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms