RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 CHDHQ8NE62 594 aaPredicted RBP12.33□□□□□ -0.44
TCOF1-215ENST00000515516 OR56A1Q8NGH5 318 aa12.33□□□□□ -0.44
TCOF1-215ENST00000515516 OR4C3Q8NH37 302 aa12.33□□□□□ -0.44
TCOF1-215ENST00000515516 FAM110BQ8TC76 370 aa12.33□□□□□ -0.44
TCOF1-215ENST00000515516 FAM120BQ96EK7 910 aaKnown RBP12.33□□□□□ -0.44
TCOF1-215ENST00000515516 GIMAP5Q96F15 307 aa12.33□□□□□ -0.44
TCOF1-215ENST00000515516 C16orf58Q96GQ5 468 aa12.33□□□□□ -0.44
TCOF1-215ENST00000515516 SLC39A3Q9BRY0 314 aa12.33□□□□□ -0.44
TCOF1-215ENST00000515516 BTBD2Q9BX70 525 aa12.33□□□□□ -0.44
TCOF1-215ENST00000515516 CCM2LQ9NUG4 571 aaPredicted RBP12.33□□□□□ -0.44
TCOF1-215ENST00000515516 GIMAP2Q9UG22 337 aa12.33□□□□□ -0.44
TCOF1-215ENST00000515516 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.33□□□□□ -0.44
TCOF1-215ENST00000515516 ST6GALNAC2Q9UJ37 374 aa12.33□□□□□ -0.44
TCOF1-215ENST00000515516 VDAC3Q9Y277 283 aa12.33□□□□□ -0.44
TCOF1-215ENST00000515516 ZNF175Q9Y473 711 aa12.33□□□□□ -0.44
TCOF1-215ENST00000515516 V9GYY5 206 aaPredicted RBP12.33□□□□□ -0.44
TCOF1-215ENST00000515516 HCFC1P51610 2035 aa12.33□□□□□ -0.44
TCOF1-215ENST00000515516 INTS1Q8N201 2190 aaKnown RBP12.32□□□□□ -0.44
TCOF1-215ENST00000515516 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.32□□□□□ -0.44
TCOF1-215ENST00000515516 WDR91A4D1P6 747 aa12.32□□□□□ -0.44
TCOF1-215ENST00000515516 SH3D21A4FU49 640 aa12.32□□□□□ -0.44
TCOF1-215ENST00000515516 H3BNH8 94 aa12.32□□□□□ -0.44
TCOF1-215ENST00000515516 TYROBPO43914 113 aa12.32□□□□□ -0.44
TCOF1-215ENST00000515516 TNFSF13O75888 250 aa12.32□□□□□ -0.44
TCOF1-215ENST00000515516 HMGN2P05204 90 aaKnown RBP12.32□□□□□ -0.44
TCOF1-215ENST00000515516 LAMP1P11279 417 aa12.32□□□□□ -0.44
TCOF1-215ENST00000515516 FCGR2AP12318 317 aa12.32□□□□□ -0.44
TCOF1-215ENST00000515516 CREB1P16220 341 aa12.32□□□□□ -0.44
TCOF1-215ENST00000515516 ZNF17P17021 662 aa12.32□□□□□ -0.44
TCOF1-215ENST00000515516 KCNJ5P48544 419 aa12.32□□□□□ -0.44
TCOF1-215ENST00000515516 CCT3P49368 545 aaKnown RBP12.32□□□□□ -0.44
TCOF1-215ENST00000515516 SUCLG1P53597 346 aaKnown RBP12.32□□□□□ -0.44
TCOF1-215ENST00000515516 CLDN15P56746 228 aa12.32□□□□□ -0.44
TCOF1-215ENST00000515516 CLDN20P56880 219 aa12.32□□□□□ -0.44
TCOF1-215ENST00000515516 OCRLQ01968 901 aa12.32□□□□□ -0.44
TCOF1-215ENST00000515516 TP53BP2Q13625 1128 aa12.32□□□□□ -0.44
TCOF1-215ENST00000515516 LASP1Q14847 261 aaKnown RBP12.32□□□□□ -0.44
TCOF1-215ENST00000515516 PTGR1Q14914 329 aa12.32□□□□□ -0.44
TCOF1-215ENST00000515516 BHLHB9Q6PI77 547 aa12.32□□□□□ -0.44
TCOF1-215ENST00000515516 APOOLQ6UXV4 268 aa12.32□□□□□ -0.44
TCOF1-215ENST00000515516 ZNF527Q8NB42 609 aa12.32□□□□□ -0.44
TCOF1-215ENST00000515516 ADAMTS15Q8TE58 950 aa12.32□□□□□ -0.44
TCOF1-215ENST00000515516 FIG4Q92562 907 aa12.32□□□□□ -0.44
TCOF1-215ENST00000515516 ZBTB8AQ96BR9 441 aa12.32□□□□□ -0.44
TCOF1-215ENST00000515516 MOAP1Q96BY2 351 aa12.32□□□□□ -0.44
TCOF1-215ENST00000515516 OTUB1Q96FW1 271 aaPredicted RBP12.32□□□□□ -0.44
TCOF1-215ENST00000515516 PGM2Q96G03 612 aa12.32□□□□□ -0.44
TCOF1-215ENST00000515516 ZNF845Q96IR2 970 aaPredicted RBP12.32□□□□□ -0.44
TCOF1-215ENST00000515516 C3orf30Q96M34 536 aa12.32□□□□□ -0.44
TCOF1-215ENST00000515516 STACQ99469 402 aa12.32□□□□□ -0.44
TCOF1-215ENST00000515516 FOXC2Q99958 501 aa12.32□□□□□ -0.44
TCOF1-215ENST00000515516 ACTRT3Q9BYD9 372 aa12.32□□□□□ -0.44
TCOF1-215ENST00000515516 HOXD1Q9GZZ0 328 aa12.32□□□□□ -0.44
TCOF1-215ENST00000515516 CENPHQ9H3R5 247 aa12.32□□□□□ -0.44
TCOF1-215ENST00000515516 PIGUQ9H490 435 aa12.32□□□□□ -0.44
TCOF1-215ENST00000515516 DUSP22Q9NRW4 184 aa12.32□□□□□ -0.44
TCOF1-215ENST00000515516 PAQR5Q9NXK6 330 aaPredicted RBP12.32□□□□□ -0.44
TCOF1-215ENST00000515516 DCHS2Q6V1P9 2916 aa12.32□□□□□ -0.44
TCOF1-215ENST00000515516 CSMD2Q7Z408 3487 aa12.32□□□□□ -0.44
TCOF1-215ENST00000515516 POLQO75417 2590 aa12.31□□□□□ -0.44
TCOF1-215ENST00000515516 H0YC42 278 aa12.31□□□□□ -0.44
TCOF1-215ENST00000515516 EIF1AYO14602 144 aaKnown RBP12.31□□□□□ -0.44
TCOF1-215ENST00000515516 PLGP00747 810 aaPredicted RBP12.31□□□□□ -0.44
TCOF1-215ENST00000515516 ME2P23368 584 aa12.31□□□□□ -0.44
TCOF1-215ENST00000515516 EIF1AXP47813 144 aaKnown RBP12.31□□□□□ -0.44
TCOF1-215ENST00000515516 TPD52P55327 224 aaPredicted RBP12.31□□□□□ -0.44
TCOF1-215ENST00000515516 SIRPAP78324 504 aa12.31□□□□□ -0.44
TCOF1-215ENST00000515516 PON3Q15166 354 aa12.31□□□□□ -0.44
TCOF1-215ENST00000515516 CHI3L2Q15782 390 aa12.31□□□□□ -0.44
TCOF1-215ENST00000515516 PGS1Q32NB8 556 aa12.31□□□□□ -0.44
TCOF1-215ENST00000515516 PDSS1Q5T2R2 415 aa12.31□□□□□ -0.44
TCOF1-215ENST00000515516 CCNJQ5T5M9 372 aa12.31□□□□□ -0.44
TCOF1-215ENST00000515516 CDC73Q6P1J9 531 aa12.31□□□□□ -0.44
TCOF1-215ENST00000515516 CAMKMTQ7Z624 323 aa12.31□□□□□ -0.44
TCOF1-215ENST00000515516 MREGQ8N565 214 aa12.31□□□□□ -0.44
TCOF1-215ENST00000515516 METTL25Q8N6Q8 603 aa12.31□□□□□ -0.44
TCOF1-215ENST00000515516 B4GALNT2Q8NHY0 566 aa12.31□□□□□ -0.44
TCOF1-215ENST00000515516 FNDC9Q8TBE3 224 aa12.31□□□□□ -0.44
TCOF1-215ENST00000515516 ACTRT2Q8TDY3 377 aa12.31□□□□□ -0.44
TCOF1-215ENST00000515516 CDS1Q92903 461 aa12.31□□□□□ -0.44
TCOF1-215ENST00000515516 COQ8BQ96D53 544 aa12.31□□□□□ -0.44
TCOF1-215ENST00000515516 STARD4Q96DR4 205 aa12.31□□□□□ -0.44
TCOF1-215ENST00000515516 SH3YL1Q96HL8 342 aaPredicted RBP12.31□□□□□ -0.44
TCOF1-215ENST00000515516 DUSP26Q9BV47 211 aa12.31□□□□□ -0.44
TCOF1-215ENST00000515516 BHLHE41Q9C0J9 482 aaPredicted RBP12.31□□□□□ -0.44
TCOF1-215ENST00000515516 NEUROD4Q9HD90 331 aa12.31□□□□□ -0.44
TCOF1-215ENST00000515516 SIRT3Q9NTG7 399 aaPredicted RBP12.31□□□□□ -0.44
TCOF1-215ENST00000515516 GIN1Q9NXP7 522 aa12.31□□□□□ -0.44
TCOF1-215ENST00000515516 ELOVL5Q9NYP7 299 aa12.31□□□□□ -0.44
TCOF1-215ENST00000515516 NOP53Q9NZM5 478 aaKnown RBP12.31□□□□□ -0.44
TCOF1-215ENST00000515516 PLEKHA6Q9Y2H5 1048 aa12.31□□□□□ -0.44
TCOF1-215ENST00000515516 A0A1W2PQD3 144 aa12.3□□□□□ -0.44
TCOF1-215ENST00000515516 SHISA8B8ZZ34 492 aa12.3□□□□□ -0.44
TCOF1-215ENST00000515516 TM9SF1O15321 606 aa12.3□□□□□ -0.44
TCOF1-215ENST00000515516 BIRC5O15392 142 aa12.3□□□□□ -0.44
TCOF1-215ENST00000515516 SNUPNO95149 360 aaKnown RBP12.3□□□□□ -0.44
TCOF1-215ENST00000515516 SYNGR4O95473 234 aa12.3□□□□□ -0.44
TCOF1-215ENST00000515516 C6orf47O95873 294 aa12.3□□□□□ -0.44
TCOF1-215ENST00000515516 SERPINE1P05121 402 aa12.3□□□□□ -0.44
TCOF1-215ENST00000515516 MYZAPP0CAP1 466 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms