RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 TMEM131Q92545 1883 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 F5P12259 2224 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 ADAMDEC1O15204 470 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 FRS3O43559 492 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 MMP20O60882 483 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 LYPD3O95274 346 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 CFDP00746 253 aaPredicted RBP6.91□□□□□ -1.3
CLIP1-205ENST00000514271 CD1AP06126 327 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 HEXBP07686 556 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 CLEC2LP0C7M8 214 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 GRK6P43250 576 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 PTSQ03393 145 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 ZNF91Q05481 1191 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 FHL1Q13642 323 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 IL10RAQ13651 578 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 STK11Q15831 433 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 XKR6Q5GH73 641 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 C1orf94Q6P1W5 598 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 PAQR6Q6TCH4 344 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 HDDC2Q7Z4H3 204 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 OR6K2Q8NGY2 324 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 OR51Q1Q8NH59 317 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 VANGL1Q8TAA9 524 aaPredicted RBP6.91□□□□□ -1.3
CLIP1-205ENST00000514271 ADAMTS18Q8TE60 1221 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 GLYATL1Q969I3 302 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 HYLS1Q96M11 299 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 PPIL3Q9H2H8 161 aaKnown RBP6.91□□□□□ -1.3
CLIP1-205ENST00000514271 TEKT2Q9UIF3 430 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 FKBPLQ9UIM3 349 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 POLHQ9Y253 713 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 PDPK1O15530 556 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 PSIP1O75475 530 aaKnown RBP6.91□□□□□ -1.3
CLIP1-205ENST00000514271 RFPL3O75679 317 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 DIRAS1O95057 198 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 NR2F6P10588 404 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 EPHA8P29322 1005 aaPredicted RBP6.91□□□□□ -1.3
CLIP1-205ENST00000514271 CD79BP40259 229 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 SLC9A3P48764 834 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 PCBP4P57723 403 aaKnown RBP6.91□□□□□ -1.3
CLIP1-205ENST00000514271 DEFA1P59665 94 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 DEFA3P59666 94 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 CDK3Q00526 305 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 C17orf67Q0P5P2 114 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 KLF9Q13886 244 aaPredicted RBP6.91□□□□□ -1.3
CLIP1-205ENST00000514271 TCEA2Q15560 299 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 LIPJQ5W064 366 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 OR52N2Q8NGI0 321 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 METTL6Q8TCB7 284 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 COQ7Q99807 217 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 MND1Q9BWT6 205 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 BOCQ9BWV1 1114 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 UCK2Q9BZX2 261 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 REXO4Q9GZR2 422 aaKnown RBP6.91□□□□□ -1.3
CLIP1-205ENST00000514271 SIRT3Q9NTG7 399 aaPredicted RBP6.91□□□□□ -1.3
CLIP1-205ENST00000514271 ZDHHC3Q9NYG2 299 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 EMC3Q9P0I2 261 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.91□□□□□ -1.3
CLIP1-205ENST00000514271 HEBP2Q9Y5Z4 205 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 TOR1AO14656 332 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 MFN2O95140 757 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 GP1BAP07359 652 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 OSMP13725 252 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 RHCEP18577 417 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.91□□□□□ -1.3
CLIP1-205ENST00000514271 FUT5Q11128 374 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 SCARB2Q14108 478 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 CEBPEQ15744 281 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 GSG1Q2KHT4 349 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 TIMM50Q3ZCQ8 353 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 KRTCAP3Q53RY4 240 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 TMEM255AQ5JRV8 349 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 PDZK1Q5T2W1 519 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 RAET1GQ6H3X3 334 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 FAM71E1Q6IPT2 247 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 TCTN3Q6NUS6 607 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 TMEM81Q6P7N7 255 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 LINC00518Q8N0U6 118 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 FAM46DQ8NEK8 389 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 OR10G2Q8NGC3 310 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 SLC22A8Q8TCC7 542 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 RLN3Q8WXF3 142 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 NAT6Q93015 286 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 MARC2Q969Z3 335 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 BMFQ96LC9 184 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 WRAP53Q9BUR4 548 aaKnown RBP6.91□□□□□ -1.3
CLIP1-205ENST00000514271 EDEM2Q9BV94 578 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 SLC6A17Q9H1V8 727 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 LDAHQ9H6V9 325 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 DLL4Q9NR61 685 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 ENPP4Q9Y6X5 453 aa6.91□□□□□ -1.3
CLIP1-205ENST00000514271 IQCF5A8MTL0 148 aa6.9□□□□□ -1.3
CLIP1-205ENST00000514271 A8MV72 311 aaPredicted RBP6.9□□□□□ -1.3
CLIP1-205ENST00000514271 J3KTA2 159 aa6.9□□□□□ -1.3
CLIP1-205ENST00000514271 DNASE2O00115 360 aaPredicted RBP6.9□□□□□ -1.3
CLIP1-205ENST00000514271 MYL12BO14950 172 aa6.9□□□□□ -1.3
CLIP1-205ENST00000514271 SLCO2B1O94956 709 aa6.9□□□□□ -1.3
CLIP1-205ENST00000514271 MYL12AP19105 171 aa6.9□□□□□ -1.3
CLIP1-205ENST00000514271 SLC2A5P22732 501 aa6.9□□□□□ -1.3
CLIP1-205ENST00000514271 NDUFS1P28331 727 aa6.9□□□□□ -1.3
CLIP1-205ENST00000514271 SCN1BQ07699 218 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms