RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 RADILQ96JH8 1075 aa9.69□□□□□ -0.86
DDX41-216ENST00000513562 NPAS1Q99742 590 aa9.69□□□□□ -0.86
DDX41-216ENST00000513562 DHRS9Q9BPW9 319 aa9.69□□□□□ -0.86
DDX41-216ENST00000513562 TBL1XR1Q9BZK7 514 aa9.69□□□□□ -0.86
DDX41-216ENST00000513562 ELOVL6Q9H5J4 265 aa9.69□□□□□ -0.86
DDX41-216ENST00000513562 GP6Q9HCN6 339 aa9.69□□□□□ -0.86
DDX41-216ENST00000513562 NPAP1Q9NZP6 1156 aa9.69□□□□□ -0.86
DDX41-216ENST00000513562 TENM1Q9UKZ4 2725 aa9.69□□□□□ -0.86
DDX41-216ENST00000513562 GOLGA6L6A8MZA4 724 aa9.68□□□□□ -0.86
DDX41-216ENST00000513562 VWC2LB2RUY7 222 aa9.68□□□□□ -0.86
DDX41-216ENST00000513562 ZNF814B7Z6K7 855 aa9.68□□□□□ -0.86
DDX41-216ENST00000513562 E7EQL1 145 aa9.68□□□□□ -0.86
DDX41-216ENST00000513562 ITGA2P17301 1181 aa9.68□□□□□ -0.86
DDX41-216ENST00000513562 DR1Q01658 176 aa9.68□□□□□ -0.86
DDX41-216ENST00000513562 CSTF3Q12996 717 aaKnown RBP9.68□□□□□ -0.86
DDX41-216ENST00000513562 ACAP2Q15057 778 aa9.68□□□□□ -0.86
DDX41-216ENST00000513562 STK11Q15831 433 aa9.68□□□□□ -0.86
DDX41-216ENST00000513562 FAM83EQ2M2I3 478 aa9.68□□□□□ -0.86
DDX41-216ENST00000513562 SGO1Q5FBB7 561 aa9.68□□□□□ -0.86
DDX41-216ENST00000513562 PDSS1Q5T2R2 415 aa9.68□□□□□ -0.86
DDX41-216ENST00000513562 Q6ZT83 130 aa9.68□□□□□ -0.86
DDX41-216ENST00000513562 CCDC91Q7Z6B0 441 aa9.68□□□□□ -0.86
DDX41-216ENST00000513562 FAM9CQ8IZT9 166 aa9.68□□□□□ -0.86
DDX41-216ENST00000513562 DEPDC4Q8N2C3 294 aa9.68□□□□□ -0.86
DDX41-216ENST00000513562 MUC15Q8N387 334 aa9.68□□□□□ -0.86
DDX41-216ENST00000513562 C1orf52Q8N6N3 182 aaKnown RBP9.68□□□□□ -0.86
DDX41-216ENST00000513562 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.68□□□□□ -0.86
DDX41-216ENST00000513562 OSTF1Q92882 214 aa9.68□□□□□ -0.86
DDX41-216ENST00000513562 ATP6V1E2Q96A05 226 aa9.68□□□□□ -0.86
DDX41-216ENST00000513562 EXOSC8Q96B26 276 aaKnown RBP9.68□□□□□ -0.86
DDX41-216ENST00000513562 KLHL15Q96M94 604 aa9.68□□□□□ -0.86
DDX41-216ENST00000513562 RNF145Q96MT1 663 aa9.68□□□□□ -0.86
DDX41-216ENST00000513562 PRR14Q9BWN1 585 aa9.68□□□□□ -0.86
DDX41-216ENST00000513562 TMEM185BQ9H7F4 350 aa9.68□□□□□ -0.86
DDX41-216ENST00000513562 BRF2Q9HAW0 419 aa9.68□□□□□ -0.86
DDX41-216ENST00000513562 Q9N2J8 555 aa9.68□□□□□ -0.86
DDX41-216ENST00000513562 FARSBQ9NSD9 589 aaKnown RBP9.68□□□□□ -0.86
DDX41-216ENST00000513562 SENP1Q9P0U3 644 aa9.68□□□□□ -0.86
DDX41-216ENST00000513562 CPSF2Q9P2I0 782 aaKnown RBP9.68□□□□□ -0.86
DDX41-216ENST00000513562 MRTO4Q9UKD2 239 aaKnown RBP9.68□□□□□ -0.86
DDX41-216ENST00000513562 A0A087WV62 115 aa9.67□□□□□ -0.86
DDX41-216ENST00000513562 A0A1W2PRB8 838 aa9.67□□□□□ -0.86
DDX41-216ENST00000513562 KIAA0513O60268 411 aa9.67□□□□□ -0.86
DDX41-216ENST00000513562 LYZL6O75951 148 aa9.67□□□□□ -0.86
DDX41-216ENST00000513562 UTS2O95399 124 aa9.67□□□□□ -0.86
DDX41-216ENST00000513562 PSMG1O95456 288 aa9.67□□□□□ -0.86
DDX41-216ENST00000513562 ESRRBO95718 433 aa9.67□□□□□ -0.86
DDX41-216ENST00000513562 YES1P07947 543 aa9.67□□□□□ -0.86
DDX41-216ENST00000513562 IL3P08700 152 aa9.67□□□□□ -0.86
DDX41-216ENST00000513562 COL6A2P12110 1019 aa9.67□□□□□ -0.86
DDX41-216ENST00000513562 EGR1P18146 543 aa9.67□□□□□ -0.86
DDX41-216ENST00000513562 ME2P23368 584 aa9.67□□□□□ -0.86
DDX41-216ENST00000513562 EFNA4P52798 201 aa9.67□□□□□ -0.86
DDX41-216ENST00000513562 PSMD4P55036 377 aaKnown RBP9.67□□□□□ -0.86
DDX41-216ENST00000513562 CARD18P57730 90 aa9.67□□□□□ -0.86
DDX41-216ENST00000513562 PLPPR5Q32ZL2 321 aa9.67□□□□□ -0.86
DDX41-216ENST00000513562 TIMM23BQ5SRD1 257 aa9.67□□□□□ -0.86
DDX41-216ENST00000513562 CPTPQ5TA50 214 aa9.67□□□□□ -0.86
DDX41-216ENST00000513562 B3GLCTQ6Y288 498 aa9.67□□□□□ -0.86
DDX41-216ENST00000513562 Q6ZSR9 355 aa9.67□□□□□ -0.86
DDX41-216ENST00000513562 CTAGE3PQ8IX95 158 aa9.67□□□□□ -0.86
DDX41-216ENST00000513562 FBXL14Q8N1E6 418 aa9.67□□□□□ -0.86
DDX41-216ENST00000513562 CEP112Q8N8E3 955 aa9.67□□□□□ -0.86
DDX41-216ENST00000513562 PTGR2Q8N8N7 351 aaPredicted RBP9.67□□□□□ -0.86
DDX41-216ENST00000513562 OR4F6Q8NGB9 312 aa9.67□□□□□ -0.86
DDX41-216ENST00000513562 CPNE4Q96A23 557 aaPredicted RBP9.67□□□□□ -0.86
DDX41-216ENST00000513562 MUCL1Q96DR8 90 aa9.67□□□□□ -0.86
DDX41-216ENST00000513562 ZMYND19Q96E35 227 aaPredicted RBP9.67□□□□□ -0.86
DDX41-216ENST00000513562 NSUN5Q96P11 429 aaKnown RBP9.67□□□□□ -0.86
DDX41-216ENST00000513562 SRXN1Q9BYN0 137 aa9.67□□□□□ -0.86
DDX41-216ENST00000513562 SHCBP1LQ9BZQ2 653 aa9.67□□□□□ -0.86
DDX41-216ENST00000513562 TRIM31Q9BZY9 425 aa9.67□□□□□ -0.86
DDX41-216ENST00000513562 SLC35C2Q9NQQ7 365 aa9.67□□□□□ -0.86
DDX41-216ENST00000513562 GIMAP4Q9NUV9 329 aa9.67□□□□□ -0.86
DDX41-216ENST00000513562 MED17Q9NVC6 651 aa9.67□□□□□ -0.86
DDX41-216ENST00000513562 MCM8Q9UJA3 840 aa9.67□□□□□ -0.86
DDX41-216ENST00000513562 PCTPQ9UKL6 214 aa9.67□□□□□ -0.86
DDX41-216ENST00000513562 SNX12Q9UMY4 172 aa9.67□□□□□ -0.86
DDX41-216ENST00000513562 MGAT4BQ9UQ53 548 aa9.67□□□□□ -0.86
DDX41-216ENST00000513562 PPP2R2CQ9Y2T4 447 aa9.67□□□□□ -0.86
DDX41-216ENST00000513562 NDUFS8O00217 210 aa9.66□□□□□ -0.86
DDX41-216ENST00000513562 SLITRK5O94991 958 aa9.66□□□□□ -0.86
DDX41-216ENST00000513562 PDYNP01213 254 aa9.66□□□□□ -0.86
DDX41-216ENST00000513562 APEHP13798 732 aaKnown RBP9.66□□□□□ -0.86
DDX41-216ENST00000513562 COX5AP20674 150 aa9.66□□□□□ -0.86
DDX41-216ENST00000513562 SHC1P29353 583 aa9.66□□□□□ -0.86
DDX41-216ENST00000513562 MPIP34949 423 aa9.66□□□□□ -0.86
DDX41-216ENST00000513562 NR4A2P43354 598 aa9.66□□□□□ -0.86
DDX41-216ENST00000513562 OR3A2P47893 321 aa9.66□□□□□ -0.86
DDX41-216ENST00000513562 RFX3P48380 749 aa9.66□□□□□ -0.86
DDX41-216ENST00000513562 FABP6P51161 128 aa9.66□□□□□ -0.86
DDX41-216ENST00000513562 SPOCK1Q08629 439 aa9.66□□□□□ -0.86
DDX41-216ENST00000513562 GGTLC2Q14390 218 aa9.66□□□□□ -0.86
DDX41-216ENST00000513562 CR1LQ2VPA4 569 aa9.66□□□□□ -0.86
DDX41-216ENST00000513562 GRAMD1BQ3KR37 738 aa9.66□□□□□ -0.86
DDX41-216ENST00000513562 FAM174BQ3ZCQ3 159 aa9.66□□□□□ -0.86
DDX41-216ENST00000513562 ZNF544Q6NX49 715 aa9.66□□□□□ -0.86
DDX41-216ENST00000513562 TMEM108Q6UXF1 575 aa9.66□□□□□ -0.86
DDX41-216ENST00000513562 TRABD2AQ86V40 505 aa9.66□□□□□ -0.86
DDX41-216ENST00000513562 P2RY8Q86VZ1 359 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms