RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 ABCD4O14678 606 aa8.07□□□□□ -1.12
NUP54-211ENST00000512151 SMAD9O15198 467 aaKnown RBP8.07□□□□□ -1.12
NUP54-211ENST00000512151 SUPT3HO75486 399 aa8.07□□□□□ -1.12
NUP54-211ENST00000512151 ALX3O95076 343 aa8.07□□□□□ -1.12
NUP54-211ENST00000512151 SLC35E2P0CK97 266 aa8.07□□□□□ -1.12
NUP54-211ENST00000512151 ZNF23P17027 643 aa8.07□□□□□ -1.12
NUP54-211ENST00000512151 GRK2P25098 689 aa8.07□□□□□ -1.12
NUP54-211ENST00000512151 GALNSP34059 522 aa8.07□□□□□ -1.12
NUP54-211ENST00000512151 GGT5P36269 586 aa8.07□□□□□ -1.12
NUP54-211ENST00000512151 MDH1P40925 334 aaKnown RBP8.07□□□□□ -1.12
NUP54-211ENST00000512151 SSR2P43308 183 aa8.07□□□□□ -1.12
NUP54-211ENST00000512151 PDLIM4P50479 330 aa8.07□□□□□ -1.12
NUP54-211ENST00000512151 CTBP2P56545 445 aa8.07□□□□□ -1.12
NUP54-211ENST00000512151 WDR4P57081 412 aaKnown RBP8.07□□□□□ -1.12
NUP54-211ENST00000512151 EEFSECP57772 596 aaKnown RBP8.07□□□□□ -1.12
NUP54-211ENST00000512151 PLCXD2Q0VAA5 305 aa8.07□□□□□ -1.12
NUP54-211ENST00000512151 PCLAFQ15004 111 aa8.07□□□□□ -1.12
NUP54-211ENST00000512151 CCDC153Q494R4 210 aa8.07□□□□□ -1.12
NUP54-211ENST00000512151 SFRP5Q5T4F7 317 aa8.07□□□□□ -1.12
NUP54-211ENST00000512151 RAET1LQ5VY80 246 aa8.07□□□□□ -1.12
NUP54-211ENST00000512151 FAM219BQ5XKK7 198 aa8.07□□□□□ -1.12
NUP54-211ENST00000512151 PPP4R4Q6NUP7 873 aa8.07□□□□□ -1.12
NUP54-211ENST00000512151 KLC3Q6P597 504 aa8.07□□□□□ -1.12
NUP54-211ENST00000512151 FRA10AC1Q70Z53 315 aa8.07□□□□□ -1.12
NUP54-211ENST00000512151 RPS27LQ71UM5 84 aaKnown RBP8.07□□□□□ -1.12
NUP54-211ENST00000512151 GGNQ86UU5 652 aa8.07□□□□□ -1.12
NUP54-211ENST00000512151 GPR180Q86V85 440 aa8.07□□□□□ -1.12
NUP54-211ENST00000512151 C7orf57Q8NEG2 295 aa8.07□□□□□ -1.12
NUP54-211ENST00000512151 ZNF473Q8WTR7 871 aaKnown RBP8.07□□□□□ -1.12
NUP54-211ENST00000512151 HSD17B8Q92506 261 aa8.07□□□□□ -1.12
NUP54-211ENST00000512151 PHF21BQ96EK2 531 aa8.07□□□□□ -1.12
NUP54-211ENST00000512151 BTBD9Q96Q07 612 aa8.07□□□□□ -1.12
NUP54-211ENST00000512151 EGFL8Q99944 293 aa8.07□□□□□ -1.12
NUP54-211ENST00000512151 DHRS9Q9BPW9 319 aa8.07□□□□□ -1.12
NUP54-211ENST00000512151 PIMREGQ9BSJ6 248 aa8.07□□□□□ -1.12
NUP54-211ENST00000512151 MECRQ9BV79 373 aa8.07□□□□□ -1.12
NUP54-211ENST00000512151 STMN4Q9H169 189 aaPredicted RBP8.07□□□□□ -1.12
NUP54-211ENST00000512151 KCNK9Q9NPC2 374 aa8.07□□□□□ -1.12
NUP54-211ENST00000512151 NGBQ9NPG2 151 aa8.07□□□□□ -1.12
NUP54-211ENST00000512151 NUDT4Q9NZJ9 180 aa8.07□□□□□ -1.12
NUP54-211ENST00000512151 CD274Q9NZQ7 290 aa8.07□□□□□ -1.12
NUP54-211ENST00000512151 A0A1W2PR48 441 aa8.06□□□□□ -1.12
NUP54-211ENST00000512151 TMEM120BA0PK00 339 aa8.06□□□□□ -1.12
NUP54-211ENST00000512151 CCDC189A1A4V9 331 aa8.06□□□□□ -1.12
NUP54-211ENST00000512151 OR2M5A3KFT3 312 aa8.06□□□□□ -1.12
NUP54-211ENST00000512151 PABPN1LA6NDY0 278 aaKnown RBP8.06□□□□□ -1.12
NUP54-211ENST00000512151 SHISA8B8ZZ34 492 aa8.06□□□□□ -1.12
NUP54-211ENST00000512151 PGRMC2O15173 223 aa8.06□□□□□ -1.12
NUP54-211ENST00000512151 PLGP00747 810 aaPredicted RBP8.06□□□□□ -1.12
NUP54-211ENST00000512151 TGFB1P01137 390 aa8.06□□□□□ -1.12
NUP54-211ENST00000512151 DHRS4L1P0CG22 281 aa8.06□□□□□ -1.12
NUP54-211ENST00000512151 CPA3P15088 417 aa8.06□□□□□ -1.12
NUP54-211ENST00000512151 EPORP19235 508 aa8.06□□□□□ -1.12
NUP54-211ENST00000512151 HK1P19367 917 aa8.06□□□□□ -1.12
NUP54-211ENST00000512151 IL32P24001 234 aa8.06□□□□□ -1.12
NUP54-211ENST00000512151 AGTR1P30556 359 aa8.06□□□□□ -1.12
NUP54-211ENST00000512151 ALDH3A1P30838 453 aa8.06□□□□□ -1.12
NUP54-211ENST00000512151 HPDP32754 393 aaPredicted RBP8.06□□□□□ -1.12
NUP54-211ENST00000512151 LSP1P33241 339 aa8.06□□□□□ -1.12
NUP54-211ENST00000512151 RBMXP38159 391 aaKnown RBP8.06□□□□□ -1.12
NUP54-211ENST00000512151 HSPA7P48741 367 aa8.06□□□□□ -1.12
NUP54-211ENST00000512151 ARFIP2P53365 341 aa8.06□□□□□ -1.12
NUP54-211ENST00000512151 HILS1P60008 231 aa8.06□□□□□ -1.12
NUP54-211ENST00000512151 EXOSC7Q15024 291 aaKnown RBP8.06□□□□□ -1.12
NUP54-211ENST00000512151 PFKFB4Q16877 469 aa8.06□□□□□ -1.12
NUP54-211ENST00000512151 AP5B1Q2VPB7 878 aa8.06□□□□□ -1.12
NUP54-211ENST00000512151 UNC50Q53HI1 259 aa8.06□□□□□ -1.12
NUP54-211ENST00000512151 CDKL4Q5MAI5 379 aa8.06□□□□□ -1.12
NUP54-211ENST00000512151 DEPDC1Q5TB30 811 aa8.06□□□□□ -1.12
NUP54-211ENST00000512151 OR4C11Q6IEV9 310 aa8.06□□□□□ -1.12
NUP54-211ENST00000512151 SULT1C3Q6IMI6 304 aa8.06□□□□□ -1.12
NUP54-211ENST00000512151 ZYG11AQ6WRX3 759 aa8.06□□□□□ -1.12
NUP54-211ENST00000512151 DEF8Q6ZN54 512 aa8.06□□□□□ -1.12
NUP54-211ENST00000512151 GALNT12Q8IXK2 581 aa8.06□□□□□ -1.12
NUP54-211ENST00000512151 MUC15Q8N387 334 aa8.06□□□□□ -1.12
NUP54-211ENST00000512151 PTGR2Q8N8N7 351 aaPredicted RBP8.06□□□□□ -1.12
NUP54-211ENST00000512151 ANKRD42Q8N9B4 389 aa8.06□□□□□ -1.12
NUP54-211ENST00000512151 FADS6Q8N9I5 356 aa8.06□□□□□ -1.12
NUP54-211ENST00000512151 RNF138Q8WVD3 245 aa8.06□□□□□ -1.12
NUP54-211ENST00000512151 RBM4Q9BWF3 364 aaKnown RBP8.06□□□□□ -1.12
NUP54-211ENST00000512151 PITHD1Q9GZP4 211 aaPredicted RBP8.06□□□□□ -1.12
NUP54-211ENST00000512151 OR51B5Q9H339 312 aa8.06□□□□□ -1.12
NUP54-211ENST00000512151 DSN1Q9H410 356 aa8.06□□□□□ -1.12
NUP54-211ENST00000512151 CNOT10Q9H9A5 744 aaKnown RBP8.06□□□□□ -1.12
NUP54-211ENST00000512151 ASB4Q9Y574 426 aa8.06□□□□□ -1.12
NUP54-211ENST00000512151 SNX8Q9Y5X2 465 aa8.06□□□□□ -1.12
NUP54-211ENST00000512151 WDR91A4D1P6 747 aa8.05□□□□□ -1.12
NUP54-211ENST00000512151 SYCE1LA8MT33 242 aa8.05□□□□□ -1.12
NUP54-211ENST00000512151 STX16-NPEPL1H3BU86 382 aa8.05□□□□□ -1.12
NUP54-211ENST00000512151 TRIM77I1YAP6 450 aa8.05□□□□□ -1.12
NUP54-211ENST00000512151 STX16O14662 325 aa8.05□□□□□ -1.12
NUP54-211ENST00000512151 TM9SF1O15321 606 aa8.05□□□□□ -1.12
NUP54-211ENST00000512151 TMPRSS11DO60235 418 aa8.05□□□□□ -1.12
NUP54-211ENST00000512151 ADAP00813 363 aa8.05□□□□□ -1.12
NUP54-211ENST00000512151 BPGMP07738 259 aa8.05□□□□□ -1.12
NUP54-211ENST00000512151 ARAFP10398 606 aa8.05□□□□□ -1.12
NUP54-211ENST00000512151 FCGR2AP12318 317 aa8.05□□□□□ -1.12
NUP54-211ENST00000512151 GFAPP14136 432 aa8.05□□□□□ -1.12
NUP54-211ENST00000512151 ATP5F1P24539 256 aaPredicted RBP8.05□□□□□ -1.12
NUP54-211ENST00000512151 SLC18A1P54219 525 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms