RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 USP34Q70CQ2 3546 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 VPS13AQ96RL7 3174 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 PLXNA3P51805 1871 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 A0A1W2PQL4 384 aaPredicted RBP4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 SDHDO14521 159 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 TCAPO15273 167 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 NDUFS4O43181 175 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 TIMM8AO60220 97 aaPredicted RBP4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 TSPAN2O60636 221 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 BCAS1O75363 584 aaPredicted RBP4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 RGS9O75916 674 aaPredicted RBP4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 CBX6O95503 412 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 ACSL3O95573 720 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 GHRHP01286 108 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 RPN2P04844 631 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 IFNA16P05015 189 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 GP1BAP07359 652 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 ANKRD34CP0C6C1 535 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 EPHA1P21709 976 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 ME2P23368 584 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 ECHS1P30084 290 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 PPP2R1BP30154 601 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 SDHAP31040 664 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 SHMT2P34897 504 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 PTGFRP43088 359 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 ETV4P43268 484 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 TGM4P49221 684 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 MTM1Q13496 603 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 FGFBP1Q14512 234 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 TAF1AQ15573 450 aaPredicted RBP4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 PSG3Q16557 428 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 CPSF6Q16630 551 aaKnown RBP eCLIP4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 PXDC1Q5TGL8 231 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 DCAF12L2Q5VW00 463 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 RHBDD2Q6NTF9 364 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 DCDC5Q6ZRR9 648 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 ARCQ7LC44 396 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 SSX9Q7RTT3 188 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 TIPARPQ7Z3E1 657 aaKnown RBP4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 RNF130Q86XS8 419 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 CDYL2Q8N8U2 506 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 SMRP1Q8NCR6 262 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 HM13Q8TCT9 377 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 BLOC1S5Q8TDH9 187 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 WIPF2Q8TF74 440 aaPredicted RBP4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 TCEAL4Q96EI5 215 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 OTUB1Q96FW1 271 aaPredicted RBP4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 PPP1R2P1Q96PQ5 205 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 UBL7Q96S82 380 aaPredicted RBP4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 CDCA3Q99618 268 aaPredicted RBP4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 ZNF184Q99676 751 aaPredicted RBP4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 CMKLR1Q99788 373 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 MAPKAP1Q9BPZ7 522 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 BEX2Q9BXY8 128 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 ZNF717Q9BY31 904 aaPredicted RBP4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 GANQ9H2C0 597 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 SFXN1Q9H9B4 322 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 MOV10Q9HCE1 1003 aaKnown RBP4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 ABI3Q9P2A4 366 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 XPR1Q9UBH6 696 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 MLXQ9UH92 298 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 PHF11Q9UIL8 331 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 ANAPC7Q9UJX3 599 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 DNAJC12Q9UKB3 198 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 ACSL6Q9UKU0 697 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 ACOT9Q9Y305 439 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 COQ4Q9Y3A0 265 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 TSSC4Q9Y5U2 329 aaPredicted RBP4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 TEX51A0A1B0GUA7 166 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 A0A1W2PQC6 194 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 PRR19A6NJB7 356 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 A6NNC1 897 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 M0QXV9 152 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 CYP26A1O43174 497 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 DPM1O60762 260 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 CTNSO60931 367 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 CST1P01037 141 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 SERPIND1P05546 499 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 CEACAM5P06731 702 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 CD8BP10966 210 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 DBTP11182 482 aaKnown RBP4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 ENO3P13929 434 aaPredicted RBP4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 SLC2A4P14672 509 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 DRD1P21728 446 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 SERPINB5P36952 375 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 AVPR1AP37288 418 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 MTNR1AP48039 350 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 VAV2P52735 878 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 ELLP55199 621 aaPredicted RBP4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 TNK1Q13470 666 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 GUK1Q16774 197 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 ATP13A5Q4VNC0 1218 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 TIGD2Q4W5G0 525 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 TCEAL6Q6IPX3 200 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 C19orf35Q6ZS72 473 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 NET1Q7Z628 596 aaPredicted RBP4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 SYT9Q86SS6 491 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 SLC26A11Q86WA9 606 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 DMRTC2Q8IXT2 367 aaPredicted RBP4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 ZDHHC23Q8IYP9 409 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms