RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 KCNIP1Q9NZI2 227 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 TRDV1A0A1B0GX56 115 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 CHRM5P08912 532 aaPredicted RBP7.93□□□□□ -1.14
HTT-208ENST00000510626 DIO3P55073 304 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 LRRC37A5PQ49AS3 106 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 SYT6Q5T7P8 510 aaPredicted RBP7.93□□□□□ -1.14
HTT-208ENST00000510626 PARGQ86W56 976 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 ZNF561Q8N587 486 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 PLEKHA3Q9HB20 300 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 CHRNA9Q9UGM1 479 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 HES2Q9Y543 173 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 LAMB1P07942 1786 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 H2BFMP0C1H6 154 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 MS4A2Q01362 244 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 LRP8Q14114 963 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 MLIPQ5VWP3 458 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 NXPE4Q6UWF7 544 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 BEND4Q6ZU67 534 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 LRRN4Q8WUT4 740 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 SPTSSAQ969W0 71 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 LMLNQ96KR4 655 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 ZNF281Q9Y2X9 895 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 A0A0A6YYH2 397 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 A6NJ64 397 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 CACNG3O60359 315 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 AMZ1Q400G9 498 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 ZBTB37Q5TC79 503 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 FAM129CQ86XR2 697 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 ACOT11Q8WXI4 607 aaPredicted RBP7.93□□□□□ -1.14
HTT-208ENST00000510626 DAZLQ92904 295 aaKnown RBP7.93□□□□□ -1.14
HTT-208ENST00000510626 PRAP1Q96NZ9 151 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 OLAHQ9NV23 265 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 OSER1Q9NX31 292 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 VNN3Q9NY84 501 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 SOX15O60248 233 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 SERPINE2P07093 398 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 CSF2RAP15509 400 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 ADGRF3Q8IZF5 1079 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 SMDT1Q9H4I9 107 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 ACSS2Q9NR19 701 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 TAC3Q9UHF0 121 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 POLR2HP52434 150 aaKnown RBP7.93□□□□□ -1.14
HTT-208ENST00000510626 NKX2-5P52952 324 aaPredicted RBP7.93□□□□□ -1.14
HTT-208ENST00000510626 DYRK1AQ13627 763 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 ZNF516Q92618 1163 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 SLC6A17Q9H1V8 727 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 HIPK2Q9H2X6 1198 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 C1GALT1Q9NS00 363 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 SLCO3A1Q9UIG8 710 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 GVINP1Q7Z2Y8 2422 aa7.93□□□□□ -1.14
HTT-208ENST00000510626 ANKRD28O15084 1053 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 MBP02144 154 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 RAF1P04049 648 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 ALDOBP05062 364 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 AARDQ4LEZ3 155 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 CBARPQ8N350 705 aaPredicted RBP7.92□□□□□ -1.14
HTT-208ENST00000510626 SAMD11Q96NU1 681 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 SORCS2Q96PQ0 1159 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 RANGRFQ9HD47 186 aaPredicted RBP7.92□□□□□ -1.14
HTT-208ENST00000510626 HHLA1C9JL84 531 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 ARSBP15848 533 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 MCCD1P59942 119 aaPredicted RBP7.92□□□□□ -1.14
HTT-208ENST00000510626 SEMA3BQ13214 749 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 B3GLCTQ6Y288 498 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 MOB1BQ7L9L4 216 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 ANKK1Q8NFD2 765 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 C1QTNF2Q9BXJ5 285 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 DNMT3AQ9Y6K1 912 aaPredicted RBP7.92□□□□□ -1.14
HTT-208ENST00000510626 OR6C65A6NJZ3 312 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 TK1P04183 234 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 C1GALT1C1LP0DN25 315 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 CCR7P32248 378 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 SERTAD2Q14140 314 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 GRIK5Q16478 980 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 FAM117BQ6P1L5 589 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 TMUB2Q71RG4 321 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 OR14C36Q8NHC7 312 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 LMO3Q8TAP4 145 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 DCUN1D4Q92564 292 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 ZBTB8AQ96BR9 441 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 PCTPQ9UKL6 214 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 SPDEFO95238 335 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 TNFP01375 233 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 HTR2CP28335 458 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 HCCSP53701 268 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 ERVK-16P61578 105 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 CHAF1BQ13112 559 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 PDGFRLQ15198 375 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 OR13C4Q8NGS5 318 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 MSI2Q96DH6 328 aaKnown RBP7.92□□□□□ -1.14
HTT-208ENST00000510626 TXNL4BQ9NX01 149 aaKnown RBP7.92□□□□□ -1.14
HTT-208ENST00000510626 PCDHB10Q9UN67 800 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 DNAJC15Q9Y5T4 150 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 ZNF850A8MQ14 1090 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 ZNF776Q68DI1 518 aaPredicted RBP7.92□□□□□ -1.14
HTT-208ENST00000510626 C6orf120Q7Z4R8 191 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 OR5D16Q8NGK9 328 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 SLC12A9Q9BXP2 914 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 MED12Q93074 2177 aa7.92□□□□□ -1.14
HTT-208ENST00000510626 PMS2P2O95744 297 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms