RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 C6orf203Q9P0P8 240 aaPredicted RBP3.42□□□□□ -1.86
DHFR-204ENST00000508282 CHRNA9Q9UGM1 479 aa3.42□□□□□ -1.86
DHFR-204ENST00000508282 PTBP2Q9UKA9 531 aaKnown RBP3.42□□□□□ -1.86
DHFR-204ENST00000508282 RALGAPA1Q6GYQ0 2036 aa3.42□□□□□ -1.86
DHFR-204ENST00000508282 SF3B1O75533 1304 aaKnown RBP eCLIP3.42□□□□□ -1.861e-7■■■■■ 172.3
DHFR-204ENST00000508282 FRG2CA6NGY1 282 aa3.41□□□□□ -1.86
DHFR-204ENST00000508282 ARPC1BO15143 372 aaKnown RBP3.41□□□□□ -1.86
DHFR-204ENST00000508282 CALB2P22676 271 aa3.41□□□□□ -1.86
DHFR-204ENST00000508282 CHI3L1P36222 383 aaPredicted RBP3.41□□□□□ -1.86
DHFR-204ENST00000508282 DLSTP36957 453 aa3.41□□□□□ -1.86
DHFR-204ENST00000508282 PTGFRP43088 359 aa3.41□□□□□ -1.86
DHFR-204ENST00000508282 ARHGDIBP52566 201 aa3.41□□□□□ -1.86
DHFR-204ENST00000508282 BEX3Q00994 111 aa3.41□□□□□ -1.86
DHFR-204ENST00000508282 ZNF33BQ06732 778 aa3.41□□□□□ -1.86
DHFR-204ENST00000508282 CUL2Q13617 745 aa3.41□□□□□ -1.86
DHFR-204ENST00000508282 EXOSC7Q15024 291 aaKnown RBP3.41□□□□□ -1.86
DHFR-204ENST00000508282 TRIP10Q15642 601 aa3.41□□□□□ -1.86
DHFR-204ENST00000508282 QRICH1Q2TAL8 776 aa3.41□□□□□ -1.86
DHFR-204ENST00000508282 CDC42EP5Q6NZY7 148 aa3.41□□□□□ -1.86
DHFR-204ENST00000508282 STOX1Q6ZVD7 989 aa3.41□□□□□ -1.86
DHFR-204ENST00000508282 LUZP1Q86V48 1076 aa3.41□□□□□ -1.86
DHFR-204ENST00000508282 VPS36Q86VN1 386 aa3.41□□□□□ -1.86
DHFR-204ENST00000508282 RDH11Q8TC12 318 aa3.41□□□□□ -1.86
DHFR-204ENST00000508282 OR5M11Q96RB7 305 aa3.41□□□□□ -1.86
DHFR-204ENST00000508282 ALG12Q9BV10 488 aa3.41□□□□□ -1.86
DHFR-204ENST00000508282 EDEM2Q9BV94 578 aa3.41□□□□□ -1.86
DHFR-204ENST00000508282 CAPS2Q9BXY5 557 aa3.41□□□□□ -1.86
DHFR-204ENST00000508282 GCOM2Q9BZD3 368 aaPredicted RBP3.41□□□□□ -1.86
DHFR-204ENST00000508282 RDH8Q9NYR8 311 aa3.41□□□□□ -1.86
DHFR-204ENST00000508282 ADAM22Q9P0K1 906 aa3.41□□□□□ -1.86
DHFR-204ENST00000508282 LHX3Q9UBR4 397 aa3.41□□□□□ -1.86
DHFR-204ENST00000508282 ZNF490Q9ULM2 529 aaPredicted RBP3.41□□□□□ -1.86
DHFR-204ENST00000508282 ABCG2Q9UNQ0 655 aa3.41□□□□□ -1.86
DHFR-204ENST00000508282 FOXJ3Q9UPW0 622 aa3.41□□□□□ -1.86
DHFR-204ENST00000508282 SPACA6W5XKT8 324 aa3.41□□□□□ -1.86
DHFR-204ENST00000508282 ZMYM6O95789 1325 aa3.41□□□□□ -1.86
DHFR-204ENST00000508282 XKRY2A2RUG3 117 aa3.4□□□□□ -1.87
DHFR-204ENST00000508282 ZFP92A6NM28 416 aa3.4□□□□□ -1.87
DHFR-204ENST00000508282 H0Y8G0 127 aa3.4□□□□□ -1.87
DHFR-204ENST00000508282 SH2D1BO14796 132 aa3.4□□□□□ -1.87
DHFR-204ENST00000508282 SURF6O75683 361 aaKnown RBP3.4□□□□□ -1.87
DHFR-204ENST00000508282 WNT2P09544 360 aa3.4□□□□□ -1.87
DHFR-204ENST00000508282 IQCF3P0C7M6 154 aa3.4□□□□□ -1.87
DHFR-204ENST00000508282 IL2RGP31785 369 aa3.4□□□□□ -1.87
DHFR-204ENST00000508282 TAGLN2P37802 199 aaKnown RBP3.4□□□□□ -1.87
DHFR-204ENST00000508282 VCPP55072 806 aaKnown RBP3.4□□□□□ -1.87
DHFR-204ENST00000508282 TNFRSF17Q02223 184 aa3.4□□□□□ -1.87
DHFR-204ENST00000508282 PTCH1Q13635 1447 aa3.4□□□□□ -1.87
DHFR-204ENST00000508282 CD226Q15762 336 aa3.4□□□□□ -1.87
DHFR-204ENST00000508282 IMMTQ16891 758 aaKnown RBP3.4□□□□□ -1.87
DHFR-204ENST00000508282 TATDN3Q17R31 274 aa3.4□□□□□ -1.87
DHFR-204ENST00000508282 SHROOM1Q2M3G4 852 aaPredicted RBP3.4□□□□□ -1.87
DHFR-204ENST00000508282 ZNF311Q5JNZ3 666 aa3.4□□□□□ -1.87
DHFR-204ENST00000508282 TCHHL1Q5QJ38 904 aaPredicted RBP3.4□□□□□ -1.87
DHFR-204ENST00000508282 NIPAL3Q6P499 406 aa3.4□□□□□ -1.87
DHFR-204ENST00000508282 BLOC1S2Q6QNY1 142 aa3.4□□□□□ -1.87
DHFR-204ENST00000508282 CWC27Q6UX04 472 aaKnown RBP3.4□□□□□ -1.87
DHFR-204ENST00000508282 OR13F1Q8NGS4 319 aa3.4□□□□□ -1.87
DHFR-204ENST00000508282 TMEM37Q8WXS4 190 aa3.4□□□□□ -1.87
DHFR-204ENST00000508282 MCHR2Q969V1 340 aa3.4□□□□□ -1.87
DHFR-204ENST00000508282 C4orf36Q96KX1 117 aa3.4□□□□□ -1.87
DHFR-204ENST00000508282 SENP8Q96LD8 212 aa3.4□□□□□ -1.87
DHFR-204ENST00000508282 DEFB118Q96PH6 123 aa3.4□□□□□ -1.87
DHFR-204ENST00000508282 VPS35Q96QK1 796 aa3.4□□□□□ -1.87
DHFR-204ENST00000508282 PSKH2Q96QS6 385 aa3.4□□□□□ -1.87
DHFR-204ENST00000508282 SECISBP2Q96T21 854 aaKnown RBP3.4□□□□□ -1.87
DHFR-204ENST00000508282 NDUFAF3Q9BU61 184 aa3.4□□□□□ -1.87
DHFR-204ENST00000508282 WRAP53Q9BUR4 548 aaKnown RBP3.4□□□□□ -1.87
DHFR-204ENST00000508282 FAM124BQ9H5Z6 455 aaPredicted RBP3.4□□□□□ -1.87
DHFR-204ENST00000508282 ASB8Q9H765 288 aa3.4□□□□□ -1.87
DHFR-204ENST00000508282 NRN1Q9NPD7 142 aa3.4□□□□□ -1.87
DHFR-204ENST00000508282 P2RX2Q9UBL9 471 aa3.4□□□□□ -1.87
DHFR-204ENST00000508282 CAB39Q9Y376 341 aaPredicted RBP3.4□□□□□ -1.87
DHFR-204ENST00000508282 TMED5Q9Y3A6 229 aa3.4□□□□□ -1.87
DHFR-204ENST00000508282 RNF115Q9Y4L5 304 aa3.4□□□□□ -1.87
DHFR-204ENST00000508282 NSD2O96028 1365 aa3.39□□□□□ -1.87
DHFR-204ENST00000508282 ZSCAN5BA6NJL1 495 aa3.39□□□□□ -1.87
DHFR-204ENST00000508282 CYB561D2O14569 222 aa3.39□□□□□ -1.87
DHFR-204ENST00000508282 MBD3O95983 291 aa3.39□□□□□ -1.87
DHFR-204ENST00000508282 CSF2P04141 144 aa3.39□□□□□ -1.87
DHFR-204ENST00000508282 IDSP22304 550 aa3.39□□□□□ -1.87
DHFR-204ENST00000508282 PTPN6P29350 595 aa3.39□□□□□ -1.87
DHFR-204ENST00000508282 SAA4P35542 130 aa3.39□□□□□ -1.87
DHFR-204ENST00000508282 ATP5OP48047 213 aa3.39□□□□□ -1.87
DHFR-204ENST00000508282 AIF1P55008 147 aa3.39□□□□□ -1.87
DHFR-204ENST00000508282 CBX1P83916 185 aa3.39□□□□□ -1.87
DHFR-204ENST00000508282 ZNF85Q03923 595 aa3.39□□□□□ -1.87
DHFR-204ENST00000508282 ASAH1Q13510 395 aa3.39□□□□□ -1.87
DHFR-204ENST00000508282 PDK3Q15120 406 aa3.39□□□□□ -1.87
DHFR-204ENST00000508282 HKDC1Q2TB90 917 aa3.39□□□□□ -1.87
DHFR-204ENST00000508282 DMKNQ6E0U4 476 aaPredicted RBP3.39□□□□□ -1.87
DHFR-204ENST00000508282 ASPHD2Q6ICH7 369 aa3.39□□□□□ -1.87
DHFR-204ENST00000508282 CBLN3Q6UW01 205 aa3.39□□□□□ -1.87
DHFR-204ENST00000508282 GOLGA7Q7Z5G4 137 aa3.39□□□□□ -1.87
DHFR-204ENST00000508282 ZNF677Q86XU0 584 aa3.39□□□□□ -1.87
DHFR-204ENST00000508282 APOBEC3FQ8IUX4 373 aaKnown RBP3.39□□□□□ -1.87
DHFR-204ENST00000508282 CEND1Q8N111 149 aa3.39□□□□□ -1.87
DHFR-204ENST00000508282 MLKLQ8NB16 471 aa3.39□□□□□ -1.87
DHFR-204ENST00000508282 ZNF397Q8NF99 534 aaPredicted RBP3.39□□□□□ -1.87
DHFR-204ENST00000508282 BRSK1Q8TDC3 778 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms