RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 STOX1Q6ZVD7 989 aa4.84□□□□□ -1.63
CHD1-204ENST00000505982 ZDHHC21Q8IVQ6 265 aa4.84□□□□□ -1.63
CHD1-204ENST00000505982 PRSS33Q8NF86 280 aa4.84□□□□□ -1.63
CHD1-204ENST00000505982 TAF15Q92804 592 aaKnown RBP eCLIP4.84□□□□□ -1.63
CHD1-204ENST00000505982 DHTKD1Q96HY7 919 aaPredicted RBP4.84□□□□□ -1.63
CHD1-204ENST00000505982 TBC1D10AQ9BXI6 508 aa4.84□□□□□ -1.63
CHD1-204ENST00000505982 NFKBIZQ9BYH8 718 aa4.84□□□□□ -1.63
CHD1-204ENST00000505982 DHX33Q9H6R0 707 aaKnown RBP4.84□□□□□ -1.63
CHD1-204ENST00000505982 RMND5AQ9H871 391 aa4.84□□□□□ -1.63
CHD1-204ENST00000505982 MBD2Q9UBB5 411 aa4.84□□□□□ -1.63
CHD1-204ENST00000505982 CTSZQ9UBR2 303 aa4.84□□□□□ -1.63
CHD1-204ENST00000505982 TBK1Q9UHD2 729 aa4.84□□□□□ -1.63
CHD1-204ENST00000505982 CTNNA3Q9UI47 895 aa4.84□□□□□ -1.63
CHD1-204ENST00000505982 SPATA2Q9UM82 520 aa4.84□□□□□ -1.63
CHD1-204ENST00000505982 MOB4Q9Y3A3 225 aa4.84□□□□□ -1.63
CHD1-204ENST00000505982 RNF115Q9Y4L5 304 aa4.84□□□□□ -1.63
CHD1-204ENST00000505982 XRN1Q8IZH2 1706 aaKnown RBP4.83□□□□□ -1.64
CHD1-204ENST00000505982 CRYBG1Q9Y4K1 1723 aa4.83□□□□□ -1.64
CHD1-204ENST00000505982 TRABD2BA6NFA1 517 aa4.83□□□□□ -1.64
CHD1-204ENST00000505982 VGLL3A8MV65 326 aa4.83□□□□□ -1.64
CHD1-204ENST00000505982 GPR89AB7ZAQ6 455 aa4.83□□□□□ -1.64
CHD1-204ENST00000505982 KIF2AO00139 706 aaPredicted RBP4.83□□□□□ -1.64
CHD1-204ENST00000505982 PDLIM1O00151 329 aa4.83□□□□□ -1.64
CHD1-204ENST00000505982 PRAMEF12O95522 483 aa4.83□□□□□ -1.64
CHD1-204ENST00000505982 GPR89BP0CG08 455 aa4.83□□□□□ -1.64
CHD1-204ENST00000505982 CLUP10909 449 aa4.83□□□□□ -1.64
CHD1-204ENST00000505982 ANXA3P12429 323 aa4.83□□□□□ -1.64
CHD1-204ENST00000505982 RPA2P15927 270 aa4.83□□□□□ -1.64
CHD1-204ENST00000505982 DRD5P21918 477 aa4.83□□□□□ -1.64
CHD1-204ENST00000505982 HNMTP50135 292 aa4.83□□□□□ -1.64
CHD1-204ENST00000505982 MS4A2Q01362 244 aa4.83□□□□□ -1.64
CHD1-204ENST00000505982 ZNF85Q03923 595 aa4.83□□□□□ -1.64
CHD1-204ENST00000505982 RAB35Q15286 201 aa4.83□□□□□ -1.64
CHD1-204ENST00000505982 UBE2V2Q15819 145 aa4.83□□□□□ -1.64
CHD1-204ENST00000505982 PDK4Q16654 411 aa4.83□□□□□ -1.64
CHD1-204ENST00000505982 SCYL2Q6P3W7 929 aa4.83□□□□□ -1.64
CHD1-204ENST00000505982 CES3Q6UWW8 571 aa4.83□□□□□ -1.64
CHD1-204ENST00000505982 RGS9BPQ6ZS82 235 aa4.83□□□□□ -1.64
CHD1-204ENST00000505982 ARL14Q8N4G2 192 aa4.83□□□□□ -1.64
CHD1-204ENST00000505982 OR2T34Q8NGX1 318 aa4.83□□□□□ -1.64
CHD1-204ENST00000505982 OR4Q3Q8NH05 313 aa4.83□□□□□ -1.64
CHD1-204ENST00000505982 AKR1E2Q96JD6 320 aa4.83□□□□□ -1.64
CHD1-204ENST00000505982 CCDC28BQ9BUN5 200 aa4.83□□□□□ -1.64
CHD1-204ENST00000505982 HEXA-AS1Q9H8Q6 139 aa4.83□□□□□ -1.64
CHD1-204ENST00000505982 CALHM2Q9HA72 323 aa4.83□□□□□ -1.64
CHD1-204ENST00000505982 CHRNA9Q9UGM1 479 aa4.83□□□□□ -1.64
CHD1-204ENST00000505982 DUSP12Q9UNI6 340 aa4.83□□□□□ -1.64
CHD1-204ENST00000505982 SMC3Q9UQE7 1217 aa4.83□□□□□ -1.64
CHD1-204ENST00000505982 AKAP12Q02952 1782 aa4.83□□□□□ -1.64
CHD1-204ENST00000505982 SIGLEC1Q9BZZ2 1709 aa4.83□□□□□ -1.64
CHD1-204ENST00000505982 DLC1Q96QB1 1528 aa4.82□□□□□ -1.64
CHD1-204ENST00000505982 ATP7BP35670 1465 aa4.82□□□□□ -1.64
CHD1-204ENST00000505982 CD163L1Q9NR16 1453 aa4.82□□□□□ -1.64
CHD1-204ENST00000505982 GOLGA6L4A6NEF3 574 aa4.82□□□□□ -1.64
CHD1-204ENST00000505982 FOXI3A8MTJ6 420 aaPredicted RBP4.82□□□□□ -1.64
CHD1-204ENST00000505982 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.82□□□□□ -1.64
CHD1-204ENST00000505982 XPO1O14980 1071 aaKnown RBP4.82□□□□□ -1.64
CHD1-204ENST00000505982 NEMFO60524 1076 aa4.82□□□□□ -1.64
CHD1-204ENST00000505982 TBX19O60806 448 aa4.82□□□□□ -1.64
CHD1-204ENST00000505982 UGT2B4P06133 528 aa4.82□□□□□ -1.64
CHD1-204ENST00000505982 PSMA2P25787 234 aa4.82□□□□□ -1.64
CHD1-204ENST00000505982 GSK3BP49841 420 aa4.82□□□□□ -1.64
CHD1-204ENST00000505982 ERVK11-1P61568 191 aa4.82□□□□□ -1.64
CHD1-204ENST00000505982 MAPK6Q16659 721 aa4.82□□□□□ -1.64
CHD1-204ENST00000505982 C14orf28Q4W4Y0 310 aa4.82□□□□□ -1.64
CHD1-204ENST00000505982 CEP85LQ5SZL2 805 aa4.82□□□□□ -1.64
CHD1-204ENST00000505982 FAAP20Q6NZ36 180 aa4.82□□□□□ -1.64
CHD1-204ENST00000505982 BTNL3Q6UXE8 466 aa4.82□□□□□ -1.64
CHD1-204ENST00000505982 HACD2Q6Y1H2 254 aa4.82□□□□□ -1.64
CHD1-204ENST00000505982 TMUB2Q71RG4 321 aa4.82□□□□□ -1.64
CHD1-204ENST00000505982 PRSS48Q7RTY5 328 aa4.82□□□□□ -1.64
CHD1-204ENST00000505982 LCA5Q86VQ0 697 aa4.82□□□□□ -1.64
CHD1-204ENST00000505982 UNC5CLQ8IV45 518 aa4.82□□□□□ -1.64
CHD1-204ENST00000505982 C4orf32Q8N8J7 132 aa4.82□□□□□ -1.64
CHD1-204ENST00000505982 ZNF491Q8N8L2 437 aa4.82□□□□□ -1.64
CHD1-204ENST00000505982 SUMF1Q8NBK3 374 aa4.82□□□□□ -1.64
CHD1-204ENST00000505982 OR5AU1Q8NGC0 362 aa4.82□□□□□ -1.64
CHD1-204ENST00000505982 RFESDQ8TAC1 157 aa4.82□□□□□ -1.64
CHD1-204ENST00000505982 FBXO30Q8TB52 745 aa4.82□□□□□ -1.64
CHD1-204ENST00000505982 PNPT1Q8TCS8 783 aaKnown RBP4.82□□□□□ -1.64
CHD1-204ENST00000505982 ADIPOR1Q96A54 375 aa4.82□□□□□ -1.64
CHD1-204ENST00000505982 RPP25Q9BUL9 199 aaKnown RBP4.82□□□□□ -1.64
CHD1-204ENST00000505982 EXOSC1Q9Y3B2 195 aaKnown RBP4.82□□□□□ -1.64
CHD1-204ENST00000505982 ADGRL3Q9HAR2 1447 aa4.81□□□□□ -1.64
CHD1-204ENST00000505982 PNPLA6Q8IY17 1366 aa4.81□□□□□ -1.64
CHD1-204ENST00000505982 RAD50Q92878 1312 aa4.81□□□□□ -1.64
CHD1-204ENST00000505982 A0A0J9YWU9 116 aa4.81□□□□□ -1.64
CHD1-204ENST00000505982 VPS37CA5D8V6 355 aaPredicted RBP4.81□□□□□ -1.64
CHD1-204ENST00000505982 RPL37AP8A6NKH3 93 aa4.81□□□□□ -1.64
CHD1-204ENST00000505982 GOLGA6L19H0YKK7 550 aa4.81□□□□□ -1.64
CHD1-204ENST00000505982 CLDN5O00501 218 aa4.81□□□□□ -1.64
CHD1-204ENST00000505982 LRRTM2O43300 516 aa4.81□□□□□ -1.64
CHD1-204ENST00000505982 MT-ND1P03886 318 aa4.81□□□□□ -1.64
CHD1-204ENST00000505982 HCKP08631 526 aa4.81□□□□□ -1.64
CHD1-204ENST00000505982 IGFBP1P08833 259 aaPredicted RBP4.81□□□□□ -1.64
CHD1-204ENST00000505982 HOXB7P09629 217 aa4.81□□□□□ -1.64
CHD1-204ENST00000505982 STK19P49842 368 aaPredicted RBP4.81□□□□□ -1.64
CHD1-204ENST00000505982 ARHGDIAP52565 204 aa4.81□□□□□ -1.64
CHD1-204ENST00000505982 TPM4P67936 248 aa4.81□□□□□ -1.64
CHD1-204ENST00000505982 IRX3P78415 501 aaPredicted RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms