RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 DTNAQ9Y4J8 743 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 PCDHGB3Q9Y5G1 929 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 HRH3Q9Y5N1 445 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 MRPS18BQ9Y676 258 aaKnown RBP9.57□□□□□ -0.88
TPM3-217ENST00000504663 HEATR5AQ86XA9 2040 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 C17orf51A8MQB3 221 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 STMND1H3BQB6 276 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 EI24O14681 340 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 PCDH17O14917 1159 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 DYRK3O43781 588 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 MAN1A2O60476 641 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 IGHEP01854 428 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 IFNW1P05000 195 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 ABCD3P28288 659 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 RRM2P31350 389 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 YAP1P46937 504 aaKnown RBP9.56□□□□□ -0.88
TPM3-217ENST00000504663 NR0B1P51843 470 aaKnown RBP9.56□□□□□ -0.88
TPM3-217ENST00000504663 HMGA2P52926 109 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 ATP12AP54707 1039 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 LAPTM4AQ15012 233 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 CD226Q15762 336 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 RSPO4Q2I0M5 234 aaPredicted RBP9.56□□□□□ -0.88
TPM3-217ENST00000504663 FLYWCH1Q4VC44 716 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 LIN52Q52LA3 116 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 KLHL26Q53HC5 615 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 MRPL2Q5T653 305 aaKnown RBP9.56□□□□□ -0.88
TPM3-217ENST00000504663 PLAG1Q6DJT9 500 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 SHQ1Q6PI26 577 aaKnown RBP9.56□□□□□ -0.88
TPM3-217ENST00000504663 FKBP9P1Q75LS8 142 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 MRGPREQ86SM8 312 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 GRAMD2AQ8IUY3 354 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 PIK3C3Q8NEB9 887 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 OR4C3Q8NH37 302 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 OR5K1Q8NHB7 308 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 VANGL1Q8TAA9 524 aaPredicted RBP9.56□□□□□ -0.88
TPM3-217ENST00000504663 CNOT9Q92600 299 aaKnown RBP9.56□□□□□ -0.88
TPM3-217ENST00000504663 TP53INP1Q96A56 240 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 ZNF524Q96C55 264 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 OMA1Q96E52 524 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 ARSGQ96EG1 525 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 HSPBAP1Q96EW2 488 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 VPS50Q96JG6 964 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 PSD2Q9BQI7 771 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 TACO1Q9BSH4 297 aaKnown RBP9.56□□□□□ -0.88
TPM3-217ENST00000504663 SPATA5L1Q9BVQ7 753 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 PRR14Q9BWN1 585 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 YY1AP1Q9H869 796 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 MMP25Q9NPA2 562 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 USE1Q9NZ43 259 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 IL17BQ9UHF5 180 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 IFT52Q9Y366 437 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 LRRC42Q9Y546 428 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 ZFHX4Q86UP3 3567 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 DOCK10Q96BY6 2186 aa9.56□□□□□ -0.88
TPM3-217ENST00000504663 TRBV4-1A0A0J9YWV2 114 aa9.55□□□□□ -0.88
TPM3-217ENST00000504663 FADS1O60427 444 aa9.55□□□□□ -0.88
TPM3-217ENST00000504663 ICOSLGO75144 302 aa9.55□□□□□ -0.88
TPM3-217ENST00000504663 UGT2B11O75310 529 aa9.55□□□□□ -0.88
TPM3-217ENST00000504663 UTS2O95399 124 aa9.55□□□□□ -0.88
TPM3-217ENST00000504663 NTN1O95631 604 aa9.55□□□□□ -0.88
TPM3-217ENST00000504663 OXSR1O95747 527 aaPredicted RBP9.55□□□□□ -0.88
TPM3-217ENST00000504663 ALPLP05186 524 aa9.55□□□□□ -0.88
TPM3-217ENST00000504663 NGFRP08138 427 aa9.55□□□□□ -0.88
TPM3-217ENST00000504663 CCNYL3P0C7X3 344 aa9.55□□□□□ -0.88
TPM3-217ENST00000504663 RHCEP18577 417 aa9.55□□□□□ -0.88
TPM3-217ENST00000504663 FPR1P21462 350 aa9.55□□□□□ -0.88
TPM3-217ENST00000504663 ELAVL4P26378 380 aaKnown RBP9.55□□□□□ -0.88
TPM3-217ENST00000504663 CD82P27701 267 aa9.55□□□□□ -0.88
TPM3-217ENST00000504663 DLSTP36957 453 aa9.55□□□□□ -0.88
TPM3-217ENST00000504663 ADH7P40394 386 aa9.55□□□□□ -0.88
TPM3-217ENST00000504663 ACAA2P42765 397 aaKnown RBP9.55□□□□□ -0.88
TPM3-217ENST00000504663 LSM11P83369 360 aaKnown RBP eCLIP9.55□□□□□ -0.88
TPM3-217ENST00000504663 HOXC5Q00444 222 aa9.55□□□□□ -0.88
TPM3-217ENST00000504663 SRSF6Q13247 344 aaKnown RBP9.55□□□□□ -0.88
TPM3-217ENST00000504663 RTP5Q14D33 572 aa9.55□□□□□ -0.88
TPM3-217ENST00000504663 SEC23BQ15437 767 aa9.55□□□□□ -0.88
TPM3-217ENST00000504663 NDUFAF6Q330K2 333 aa9.55□□□□□ -0.88
TPM3-217ENST00000504663 ZNF770Q6IQ21 691 aaPredicted RBP9.55□□□□□ -0.88
TPM3-217ENST00000504663 FAHD1Q6P587 224 aa9.55□□□□□ -0.88
TPM3-217ENST00000504663 HSDL2Q6YN16 418 aa9.55□□□□□ -0.88
TPM3-217ENST00000504663 NDUFAF7Q7L592 441 aa9.55□□□□□ -0.88
TPM3-217ENST00000504663 SLC29A4Q7RTT9 530 aa9.55□□□□□ -0.88
TPM3-217ENST00000504663 PEX5LQ8IYB4 626 aa9.55□□□□□ -0.88
TPM3-217ENST00000504663 OFCC1Q8IZS5 231 aa9.55□□□□□ -0.88
TPM3-217ENST00000504663 GALNT15Q8N3T1 639 aa9.55□□□□□ -0.88
TPM3-217ENST00000504663 PACRGLQ8N7B6 248 aa9.55□□□□□ -0.88
TPM3-217ENST00000504663 POGLUT1Q8NBL1 392 aa9.55□□□□□ -0.88
TPM3-217ENST00000504663 M1APQ8TC57 530 aa9.55□□□□□ -0.88
TPM3-217ENST00000504663 OIT3Q8WWZ8 545 aa9.55□□□□□ -0.88
TPM3-217ENST00000504663 PROX1Q92786 737 aa9.55□□□□□ -0.88
TPM3-217ENST00000504663 PRRC1Q96M27 445 aa9.55□□□□□ -0.88
TPM3-217ENST00000504663 EPYCQ99645 322 aa9.55□□□□□ -0.88
TPM3-217ENST00000504663 PIP5K1AQ99755 562 aa9.55□□□□□ -0.88
TPM3-217ENST00000504663 G6PC3Q9BUM1 346 aa9.55□□□□□ -0.88
TPM3-217ENST00000504663 BDH2Q9BUT1 245 aa9.55□□□□□ -0.88
TPM3-217ENST00000504663 OSBPL10Q9BXB5 764 aa9.55□□□□□ -0.88
TPM3-217ENST00000504663 GPR87Q9BY21 358 aa9.55□□□□□ -0.88
TPM3-217ENST00000504663 C15orf41Q9Y2V0 281 aa9.55□□□□□ -0.88
TPM3-217ENST00000504663 TESMINQ9Y4I5 508 aa9.55□□□□□ -0.88
TPM3-217ENST00000504663 FREM2Q5SZK8 3169 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms