RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 PTGR1Q14914 329 aa17.52■□□□□ 0.4
UBE2D3-215ENST00000503418 PON3Q15166 354 aa17.52■□□□□ 0.4
UBE2D3-215ENST00000503418 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.52■□□□□ 0.4
UBE2D3-215ENST00000503418 GLYR1Q49A26 553 aaPredicted RBP17.52■□□□□ 0.4
UBE2D3-215ENST00000503418 CCNJQ5T5M9 372 aa17.52■□□□□ 0.4
UBE2D3-215ENST00000503418 PPP4R4Q6NUP7 873 aa17.52■□□□□ 0.4
UBE2D3-215ENST00000503418 ZCCHC12Q6PEW1 402 aa17.52■□□□□ 0.4
UBE2D3-215ENST00000503418 ZAR1Q86SH2 424 aa17.52■□□□□ 0.4
UBE2D3-215ENST00000503418 OR6Y1Q8NGX8 325 aa17.52■□□□□ 0.4
UBE2D3-215ENST00000503418 PPP1R14CQ8TAE6 165 aa17.52■□□□□ 0.4
UBE2D3-215ENST00000503418 FNDC9Q8TBE3 224 aa17.52■□□□□ 0.4
UBE2D3-215ENST00000503418 CAVIN3Q969G5 261 aa17.52■□□□□ 0.4
UBE2D3-215ENST00000503418 ZNF845Q96IR2 970 aaPredicted RBP17.52■□□□□ 0.4
UBE2D3-215ENST00000503418 FBXO34Q9NWN3 711 aa17.52■□□□□ 0.4
UBE2D3-215ENST00000503418 AP4B1Q9Y6B7 739 aa17.52■□□□□ 0.4
UBE2D3-215ENST00000503418 NUP214P35658 2090 aaPredicted RBP17.51■□□□□ 0.39
UBE2D3-215ENST00000503418 SCDO00767 359 aa17.51■□□□□ 0.39
UBE2D3-215ENST00000503418 MSTNO14793 375 aa17.51■□□□□ 0.39
UBE2D3-215ENST00000503418 HMGN2P05204 90 aaKnown RBP17.51■□□□□ 0.39
UBE2D3-215ENST00000503418 LAMP1P11279 417 aa17.51■□□□□ 0.39
UBE2D3-215ENST00000503418 TBXA2RP21731 343 aa17.51■□□□□ 0.39
UBE2D3-215ENST00000503418 POU6F2P78424 691 aaPredicted RBP17.51■□□□□ 0.39
UBE2D3-215ENST00000503418 MLC1Q15049 377 aa17.51■□□□□ 0.39
UBE2D3-215ENST00000503418 POU4F3Q15319 338 aa17.51■□□□□ 0.39
UBE2D3-215ENST00000503418 SGCBQ16585 318 aa17.51■□□□□ 0.39
UBE2D3-215ENST00000503418 C6orf136Q5SQH8 315 aa17.51■□□□□ 0.39
UBE2D3-215ENST00000503418 CPTPQ5TA50 214 aa17.51■□□□□ 0.39
UBE2D3-215ENST00000503418 IL23RQ5VWK5 629 aa17.51■□□□□ 0.39
UBE2D3-215ENST00000503418 WDR93Q6P2C0 686 aa17.51■□□□□ 0.39
UBE2D3-215ENST00000503418 FAM110BQ8TC76 370 aa17.51■□□□□ 0.39
UBE2D3-215ENST00000503418 TUBGCP3Q96CW5 907 aa17.51■□□□□ 0.39
UBE2D3-215ENST00000503418 STARD4Q96DR4 205 aa17.51■□□□□ 0.39
UBE2D3-215ENST00000503418 PGM2Q96G03 612 aa17.51■□□□□ 0.39
UBE2D3-215ENST00000503418 SH3YL1Q96HL8 342 aaPredicted RBP17.51■□□□□ 0.39
UBE2D3-215ENST00000503418 PKNOX2Q96KN3 472 aa17.51■□□□□ 0.39
UBE2D3-215ENST00000503418 DACH2Q96NX9 599 aa17.51■□□□□ 0.39
UBE2D3-215ENST00000503418 FOXC2Q99958 501 aa17.51■□□□□ 0.39
UBE2D3-215ENST00000503418 ATAD3AQ9NVI7 634 aa17.51■□□□□ 0.39
UBE2D3-215ENST00000503418 PRRC2AP48634 2157 aaKnown RBP17.5■□□□□ 0.39
UBE2D3-215ENST00000503418 TYROBPO43914 113 aa17.5■□□□□ 0.39
UBE2D3-215ENST00000503418 NGFRP08138 427 aa17.5■□□□□ 0.39
UBE2D3-215ENST00000503418 SERPINB4P48594 390 aa17.5■□□□□ 0.39
UBE2D3-215ENST00000503418 KRT71Q3SY84 523 aa17.5■□□□□ 0.39
UBE2D3-215ENST00000503418 SPDYE7PQ495Y7 208 aa17.5■□□□□ 0.39
UBE2D3-215ENST00000503418 BTLAQ7Z6A9 289 aa17.5■□□□□ 0.39
UBE2D3-215ENST00000503418 NUDCD3Q8IVD9 361 aa17.5■□□□□ 0.39
UBE2D3-215ENST00000503418 KRTCAP2Q8N6L1 136 aa17.5■□□□□ 0.39
UBE2D3-215ENST00000503418 METTL25Q8N6Q8 603 aa17.5■□□□□ 0.39
UBE2D3-215ENST00000503418 NUDT8Q8WV74 236 aa17.5■□□□□ 0.39
UBE2D3-215ENST00000503418 CDS1Q92903 461 aa17.5■□□□□ 0.39
UBE2D3-215ENST00000503418 BTBD2Q9BX70 525 aa17.5■□□□□ 0.39
UBE2D3-215ENST00000503418 OPN3Q9H1Y3 402 aaPredicted RBP17.5■□□□□ 0.39
UBE2D3-215ENST00000503418 HHATLQ9HCP6 504 aa17.5■□□□□ 0.39
UBE2D3-215ENST00000503418 UBQLN4Q9NRR5 601 aa17.5■□□□□ 0.39
UBE2D3-215ENST00000503418 STOML1Q9UBI4 398 aa17.5■□□□□ 0.39
UBE2D3-215ENST00000503418 NDRG3Q9UGV2 375 aa17.5■□□□□ 0.39
UBE2D3-215ENST00000503418 ZNF175Q9Y473 711 aa17.5■□□□□ 0.39
UBE2D3-215ENST00000503418 ABCA4P78363 2273 aa17.5■□□□□ 0.39
UBE2D3-215ENST00000503418 WDR91A4D1P6 747 aa17.49■□□□□ 0.39
UBE2D3-215ENST00000503418 EIF1AYO14602 144 aaKnown RBP17.49■□□□□ 0.39
UBE2D3-215ENST00000503418 CASKO14936 926 aa17.49■□□□□ 0.39
UBE2D3-215ENST00000503418 LYPLA1O75608 230 aaPredicted RBP17.49■□□□□ 0.39
UBE2D3-215ENST00000503418 GOSR1O95249 250 aa17.49■□□□□ 0.39
UBE2D3-215ENST00000503418 HSPA4LO95757 839 aa17.49■□□□□ 0.39
UBE2D3-215ENST00000503418 C6orf47O95873 294 aa17.49■□□□□ 0.39
UBE2D3-215ENST00000503418 ZNF17P17021 662 aa17.49■□□□□ 0.39
UBE2D3-215ENST00000503418 ETV4P43268 484 aa17.49■□□□□ 0.39
UBE2D3-215ENST00000503418 KIR2DL2P43627 348 aaPredicted RBP17.49■□□□□ 0.39
UBE2D3-215ENST00000503418 EIF1AXP47813 144 aaKnown RBP17.49■□□□□ 0.39
UBE2D3-215ENST00000503418 ZNF41P51814 821 aaPredicted RBP17.49■□□□□ 0.39
UBE2D3-215ENST00000503418 FAM27E3Q08E93 113 aa17.49■□□□□ 0.39
UBE2D3-215ENST00000503418 TP53BP2Q13625 1128 aa17.49■□□□□ 0.39
UBE2D3-215ENST00000503418 TMEM44Q2T9K0 475 aa17.49■□□□□ 0.39
UBE2D3-215ENST00000503418 PAMR1Q6UXH9 720 aa17.49■□□□□ 0.39
UBE2D3-215ENST00000503418 OR5P2Q8WZ92 322 aa17.49■□□□□ 0.39
UBE2D3-215ENST00000503418 STACQ99469 402 aa17.49■□□□□ 0.39
UBE2D3-215ENST00000503418 PRPF18Q99633 342 aaKnown RBP17.49■□□□□ 0.39
UBE2D3-215ENST00000503418 NPAS1Q99742 590 aa17.49■□□□□ 0.39
UBE2D3-215ENST00000503418 PRRG4Q9BZD6 226 aa17.49■□□□□ 0.39
UBE2D3-215ENST00000503418 CXorf36Q9H7Y0 433 aa17.49■□□□□ 0.39
UBE2D3-215ENST00000503418 RNF122Q9H9V4 155 aa17.49■□□□□ 0.39
UBE2D3-215ENST00000503418 DUSP22Q9NRW4 184 aa17.49■□□□□ 0.39
UBE2D3-215ENST00000503418 GIN1Q9NXP7 522 aa17.49■□□□□ 0.39
UBE2D3-215ENST00000503418 EIF3LQ9Y262 564 aaKnown RBP17.49■□□□□ 0.39
UBE2D3-215ENST00000503418 A0A087WZY1 265 aa17.48■□□□□ 0.39
UBE2D3-215ENST00000503418 UQCRHLA0A096LP55 91 aa17.48■□□□□ 0.39
UBE2D3-215ENST00000503418 RGS16O15492 202 aaPredicted RBP17.48■□□□□ 0.39
UBE2D3-215ENST00000503418 CFLARO15519 480 aa17.48■□□□□ 0.39
UBE2D3-215ENST00000503418 CTIFO43310 598 aaKnown RBP17.48■□□□□ 0.39
UBE2D3-215ENST00000503418 OPN1LWP04000 364 aa17.48■□□□□ 0.39
UBE2D3-215ENST00000503418 ATP6V1C1P21283 382 aa17.48■□□□□ 0.39
UBE2D3-215ENST00000503418 LCN1P31025 176 aa17.48■□□□□ 0.39
UBE2D3-215ENST00000503418 KCNJ5P48544 419 aa17.48■□□□□ 0.39
UBE2D3-215ENST00000503418 CCT3P49368 545 aaKnown RBP17.48■□□□□ 0.39
UBE2D3-215ENST00000503418 RIPPLY3P57055 190 aa17.48■□□□□ 0.39
UBE2D3-215ENST00000503418 PDCD2Q16342 344 aaPredicted RBP17.48■□□□□ 0.39
UBE2D3-215ENST00000503418 PLPPR5Q32ZL2 321 aa17.48■□□□□ 0.39
UBE2D3-215ENST00000503418 LSM12Q3MHD2 195 aaKnown RBP17.48■□□□□ 0.39
UBE2D3-215ENST00000503418 EXOSC6Q5RKV6 272 aaKnown RBP17.48■□□□□ 0.39
UBE2D3-215ENST00000503418 CDC73Q6P1J9 531 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms