RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 VSTM2LQ96N03 204 aa2.15□□□□□ -2.07
CKS1BP2-201ENST00000497342 VPS35Q96QK1 796 aa2.15□□□□□ -2.07
CKS1BP2-201ENST00000497342 ACCSQ96QU6 501 aa2.15□□□□□ -2.07
CKS1BP2-201ENST00000497342 AGPAT1Q99943 283 aa2.15□□□□□ -2.07
CKS1BP2-201ENST00000497342 FOXC2Q99958 501 aa2.15□□□□□ -2.07
CKS1BP2-201ENST00000497342 SLC30A2Q9BRI3 323 aa2.15□□□□□ -2.07
CKS1BP2-201ENST00000497342 FEM1AQ9BSK4 669 aa2.15□□□□□ -2.07
CKS1BP2-201ENST00000497342 LRRC1Q9BTT6 524 aa2.15□□□□□ -2.07
CKS1BP2-201ENST00000497342 PITPNM3Q9BZ71 974 aa2.15□□□□□ -2.07
CKS1BP2-201ENST00000497342 CRNKL1Q9BZJ0 848 aaKnown RBP2.15□□□□□ -2.07
CKS1BP2-201ENST00000497342 GPR61Q9BZJ8 451 aa2.15□□□□□ -2.07
CKS1BP2-201ENST00000497342 SHARPINQ9H0F6 387 aa2.15□□□□□ -2.07
CKS1BP2-201ENST00000497342 EXO5Q9H790 373 aa2.15□□□□□ -2.07
CKS1BP2-201ENST00000497342 PANK3Q9H999 370 aa2.15□□□□□ -2.07
CKS1BP2-201ENST00000497342 LRRC4Q9HBW1 653 aa2.15□□□□□ -2.07
CKS1BP2-201ENST00000497342 TRPC7Q9HCX4 862 aa2.15□□□□□ -2.07
CKS1BP2-201ENST00000497342 SLC52A3Q9NQ40 469 aa2.15□□□□□ -2.07
CKS1BP2-201ENST00000497342 DDX18Q9NVP1 670 aaKnown RBP2.15□□□□□ -2.07
CKS1BP2-201ENST00000497342 RBM28Q9NW13 759 aaKnown RBP2.15□□□□□ -2.07
CKS1BP2-201ENST00000497342 SMOXQ9NWM0 555 aa2.15□□□□□ -2.07
CKS1BP2-201ENST00000497342 RAB20Q9NX57 234 aa2.15□□□□□ -2.07
CKS1BP2-201ENST00000497342 GTSE1Q9NYZ3 720 aa2.15□□□□□ -2.07
CKS1BP2-201ENST00000497342 COPS7AQ9UBW8 275 aa2.15□□□□□ -2.07
CKS1BP2-201ENST00000497342 ATP6V1HQ9UI12 483 aa2.15□□□□□ -2.07
CKS1BP2-201ENST00000497342 PSME2Q9UL46 239 aa2.15□□□□□ -2.07
CKS1BP2-201ENST00000497342 SLC7A7Q9UM01 511 aa2.15□□□□□ -2.07
CKS1BP2-201ENST00000497342 DIMT1Q9UNQ2 313 aaKnown RBP2.15□□□□□ -2.07
CKS1BP2-201ENST00000497342 CHMP2BQ9UQN3 213 aa2.15□□□□□ -2.07
CKS1BP2-201ENST00000497342 KLHDC2Q9Y2U9 406 aa2.15□□□□□ -2.07
CKS1BP2-201ENST00000497342 KLF2Q9Y5W3 355 aaPredicted RBP2.15□□□□□ -2.07
CKS1BP2-201ENST00000497342 IGSF9BQ9UPX0 1349 aa2.15□□□□□ -2.07
CKS1BP2-201ENST00000497342 ARID1BQ8NFD5 2236 aaPredicted RBP2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 PDCD11Q14690 1871 aaKnown RBP2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 A0A1W2PPE3 182 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 RPS10-NUDT3A0A1W2PQS6 291 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 DNALI1O14645 258 aaPredicted RBP2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 PRRG1O14668 218 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 TRDMT1O14717 391 aaKnown RBP2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 CCL16O15467 120 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 ZSCAN12O43309 604 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 KRT86O43790 486 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 AKAP8O43823 692 aaKnown RBP2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 PRKNO60260 465 aaPredicted RBP2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 LCMT2O60294 686 aaKnown RBP2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 CTSVO60911 334 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 ERLIN1O75477 346 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 AGTP01019 485 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 IL1BP01584 269 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 IGHG3P01860 377 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 KRT6AP02538 564 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 ATP1B1P05026 303 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 FCER2P06734 321 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 CRYGBP07316 175 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 GSTA2P09210 222 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 FRMD6-AS1P0C7T7 363 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 SLC2A3P11169 496 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 LIFP15018 202 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 ZNF12P17014 697 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 CDH3P22223 829 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 JAK1P23458 1154 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 PSMA2P25787 234 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 HOXA9P31269 272 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 CAPGP40121 348 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 NR0B1P51843 470 aaKnown RBP2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 LIMK2P53671 638 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 AIF1P55008 147 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 KCNK10P57789 538 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 HERVK_113P63132 956 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 ERVK-8P63133 956 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 MRPS6P82932 125 aaKnown RBP2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 RELQ04864 619 aaPredicted RBP2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 DPTQ07507 201 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 FCHO2Q0JRZ9 810 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 ILF3Q12906 894 aaKnown RBP eCLIP2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 DNAJC3Q13217 504 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 ILKQ13418 452 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 ITGA9Q13797 1035 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 MESDQ14696 234 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 RFTN1Q14699 578 aaPredicted RBP2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 HERC3Q15034 1050 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 KRT31Q15323 416 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 ZMYND11Q15326 602 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 IMMTQ16891 758 aaKnown RBP2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 XKR3Q5GH77 459 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 CLLU1OSQ5K130 101 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 LIPJQ5W064 366 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 ASPHD2Q6ICH7 369 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 OR7E24Q6IFN5 339 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 CTR9Q6PD62 1173 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 KDM7AQ6ZMT4 941 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 Q6ZPB1 254 aaPredicted RBP2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 Q6ZTK2 550 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 CENPUQ71F23 418 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 NLRP9Q7RTR0 991 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 TRPM8Q7Z2W7 1104 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 EFL1Q7Z2Z2 1120 aaKnown RBP2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 BNIPLQ7Z465 357 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 SPRED1Q7Z699 444 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 CACUL1Q86Y37 369 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 CCDC36Q8IYA8 594 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms