RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 DEFB113Q30KQ7 82 aa12.07□□□□□ -0.48
CTDSP1-212ENST00000494067 GALNTL6Q49A17 601 aa12.07□□□□□ -0.48
CTDSP1-212ENST00000494067 XKR7Q5GH72 579 aa12.07□□□□□ -0.48
CTDSP1-212ENST00000494067 PPP4R4Q6NUP7 873 aa12.07□□□□□ -0.48
CTDSP1-212ENST00000494067 OR6Y1Q8NGX8 325 aa12.07□□□□□ -0.48
CTDSP1-212ENST00000494067 TCP10LQ8TDR4 215 aa12.07□□□□□ -0.48
CTDSP1-212ENST00000494067 C16orf58Q96GQ5 468 aa12.07□□□□□ -0.48
CTDSP1-212ENST00000494067 PPP3R2Q96LZ3 170 aa12.07□□□□□ -0.48
CTDSP1-212ENST00000494067 MS4A4EQ96PG1 132 aa12.07□□□□□ -0.48
CTDSP1-212ENST00000494067 TMUB1Q9BVT8 246 aa12.07□□□□□ -0.48
CTDSP1-212ENST00000494067 NEUROD4Q9HD90 331 aa12.07□□□□□ -0.48
CTDSP1-212ENST00000494067 FANCFQ9NPI8 374 aa12.07□□□□□ -0.48
CTDSP1-212ENST00000494067 NTMQ9P121 344 aa12.07□□□□□ -0.48
CTDSP1-212ENST00000494067 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.07□□□□□ -0.486e-10■□□□□ 8.2
CTDSP1-212ENST00000494067 V9GYY5 206 aaPredicted RBP12.07□□□□□ -0.48
CTDSP1-212ENST00000494067 MED13LQ71F56 2210 aa12.06□□□□□ -0.48
CTDSP1-212ENST00000494067 SCDO00767 359 aa12.06□□□□□ -0.48
CTDSP1-212ENST00000494067 NPHS1O60500 1241 aa12.06□□□□□ -0.48
CTDSP1-212ENST00000494067 NKX2-2O95096 273 aa12.06□□□□□ -0.48
CTDSP1-212ENST00000494067 PLGP00747 810 aaPredicted RBP12.06□□□□□ -0.48
CTDSP1-212ENST00000494067 HRGP04196 525 aa12.06□□□□□ -0.48
CTDSP1-212ENST00000494067 FGF4P08620 206 aa12.06□□□□□ -0.48
CTDSP1-212ENST00000494067 CD79BP40259 229 aa12.06□□□□□ -0.48
CTDSP1-212ENST00000494067 PCYT1AP49585 367 aa12.06□□□□□ -0.48
CTDSP1-212ENST00000494067 ZNF41P51814 821 aaPredicted RBP12.06□□□□□ -0.48
CTDSP1-212ENST00000494067 SIRPAP78324 504 aa12.06□□□□□ -0.48
CTDSP1-212ENST00000494067 POU4F3Q15319 338 aa12.06□□□□□ -0.48
CTDSP1-212ENST00000494067 DUSP5Q16690 384 aa12.06□□□□□ -0.48
CTDSP1-212ENST00000494067 TMEM44Q2T9K0 475 aa12.06□□□□□ -0.48
CTDSP1-212ENST00000494067 PDSS1Q5T2R2 415 aa12.06□□□□□ -0.48
CTDSP1-212ENST00000494067 VWA1Q6PCB0 445 aa12.06□□□□□ -0.48
CTDSP1-212ENST00000494067 MISPQ8IVT2 679 aa12.06□□□□□ -0.48
CTDSP1-212ENST00000494067 WDR75Q8IWA0 830 aaKnown RBP12.06□□□□□ -0.48
CTDSP1-212ENST00000494067 NATD1Q8N6N6 113 aa12.06□□□□□ -0.48
CTDSP1-212ENST00000494067 COX18Q8N8Q8 333 aa12.06□□□□□ -0.48
CTDSP1-212ENST00000494067 SLC16A11Q8NCK7 471 aa12.06□□□□□ -0.48
CTDSP1-212ENST00000494067 OR7A2PQ8NGA2 310 aa12.06□□□□□ -0.48
CTDSP1-212ENST00000494067 OR4C3Q8NH37 302 aa12.06□□□□□ -0.48
CTDSP1-212ENST00000494067 FIG4Q92562 907 aa12.06□□□□□ -0.48
CTDSP1-212ENST00000494067 JADE3Q92613 823 aa12.06□□□□□ -0.48
CTDSP1-212ENST00000494067 ZBTB9Q96C00 473 aa12.06□□□□□ -0.48
CTDSP1-212ENST00000494067 STARD4Q96DR4 205 aa12.06□□□□□ -0.48
CTDSP1-212ENST00000494067 PRPF18Q99633 342 aaKnown RBP12.06□□□□□ -0.48
CTDSP1-212ENST00000494067 MED18Q9BUE0 208 aa12.06□□□□□ -0.48
CTDSP1-212ENST00000494067 ZNF395Q9H8N7 513 aaPredicted RBP12.06□□□□□ -0.48
CTDSP1-212ENST00000494067 UBQLN4Q9NRR5 601 aa12.06□□□□□ -0.48
CTDSP1-212ENST00000494067 ATAD3AQ9NVI7 634 aa12.06□□□□□ -0.48
CTDSP1-212ENST00000494067 ZDHHC2Q9UIJ5 367 aa12.06□□□□□ -0.48
CTDSP1-212ENST00000494067 PROCRQ9UNN8 238 aa12.06□□□□□ -0.48
CTDSP1-212ENST00000494067 VDAC3Q9Y277 283 aa12.06□□□□□ -0.48
CTDSP1-212ENST00000494067 EMC9Q9Y3B6 208 aa12.06□□□□□ -0.48
CTDSP1-212ENST00000494067 TRAF6Q9Y4K3 522 aa12.06□□□□□ -0.48
CTDSP1-212ENST00000494067 ANKHD1Q8IWZ3 2542 aaKnown RBP12.05□□□□□ -0.48
CTDSP1-212ENST00000494067 SPG11Q96JI7 2443 aa12.05□□□□□ -0.48
CTDSP1-212ENST00000494067 IGLV3-32A0A0A0MS00 114 aa12.05□□□□□ -0.48
CTDSP1-212ENST00000494067 ALG1L2C9J202 215 aa12.05□□□□□ -0.48
CTDSP1-212ENST00000494067 TYROBPO43914 113 aa12.05□□□□□ -0.48
CTDSP1-212ENST00000494067 SOX30O94993 753 aa12.05□□□□□ -0.48
CTDSP1-212ENST00000494067 ATE1O95260 518 aa12.05□□□□□ -0.48
CTDSP1-212ENST00000494067 SYNGR4O95473 234 aa12.05□□□□□ -0.48
CTDSP1-212ENST00000494067 NGFRP08138 427 aa12.05□□□□□ -0.48
CTDSP1-212ENST00000494067 ZNF17P17021 662 aa12.05□□□□□ -0.48
CTDSP1-212ENST00000494067 ATP6V1C1P21283 382 aa12.05□□□□□ -0.48
CTDSP1-212ENST00000494067 TBXA2RP21731 343 aa12.05□□□□□ -0.48
CTDSP1-212ENST00000494067 ME2P23368 584 aa12.05□□□□□ -0.48
CTDSP1-212ENST00000494067 SERPINB5P36952 375 aa12.05□□□□□ -0.48
CTDSP1-212ENST00000494067 ETV4P43268 484 aa12.05□□□□□ -0.48
CTDSP1-212ENST00000494067 RNF144AP50876 292 aaPredicted RBP12.05□□□□□ -0.48
CTDSP1-212ENST00000494067 CTBP2P56545 445 aa12.05□□□□□ -0.48
CTDSP1-212ENST00000494067 FAM27E3Q08E93 113 aa12.05□□□□□ -0.48
CTDSP1-212ENST00000494067 PTGR1Q14914 329 aa12.05□□□□□ -0.48
CTDSP1-212ENST00000494067 MLC1Q15049 377 aa12.05□□□□□ -0.48
CTDSP1-212ENST00000494067 ATP6AP1LQ52LC2 224 aa12.05□□□□□ -0.48
CTDSP1-212ENST00000494067 CCNJQ5T5M9 372 aa12.05□□□□□ -0.48
CTDSP1-212ENST00000494067 MFSD12Q6NUT3 480 aa12.05□□□□□ -0.48
CTDSP1-212ENST00000494067 FIGNL1Q6PIW4 674 aa12.05□□□□□ -0.48
CTDSP1-212ENST00000494067 BTLAQ7Z6A9 289 aa12.05□□□□□ -0.48
CTDSP1-212ENST00000494067 GGNQ86UU5 652 aa12.05□□□□□ -0.48
CTDSP1-212ENST00000494067 METTL25Q8N6Q8 603 aa12.05□□□□□ -0.48
CTDSP1-212ENST00000494067 GATSQ8NAP1 163 aa12.05□□□□□ -0.48
CTDSP1-212ENST00000494067 FNDC9Q8TBE3 224 aa12.05□□□□□ -0.48
CTDSP1-212ENST00000494067 FAM110BQ8TC76 370 aa12.05□□□□□ -0.48
CTDSP1-212ENST00000494067 ZBTB8AQ96BR9 441 aa12.05□□□□□ -0.48
CTDSP1-212ENST00000494067 C1orf50Q9BV19 199 aa12.05□□□□□ -0.48
CTDSP1-212ENST00000494067 PLEKHF2Q9H8W4 249 aa12.05□□□□□ -0.48
CTDSP1-212ENST00000494067 RNF122Q9H9V4 155 aa12.05□□□□□ -0.48
CTDSP1-212ENST00000494067 ZCCHC3Q9NUD5 404 aaKnown RBP12.05□□□□□ -0.48
CTDSP1-212ENST00000494067 BEX4Q9NWD9 120 aaPredicted RBP12.05□□□□□ -0.48
CTDSP1-212ENST00000494067 MCTS1Q9ULC4 181 aaKnown RBP12.05□□□□□ -0.48
CTDSP1-212ENST00000494067 TESMINQ9Y4I5 508 aa12.05□□□□□ -0.48
CTDSP1-212ENST00000494067 SNX8Q9Y5X2 465 aa12.05□□□□□ -0.48
CTDSP1-212ENST00000494067 PRRC2AP48634 2157 aaKnown RBP12.04□□□□□ -0.48
CTDSP1-212ENST00000494067 A0A1W2PRB8 838 aa12.04□□□□□ -0.48
CTDSP1-212ENST00000494067 C16orf97H3BN30 126 aa12.04□□□□□ -0.48
CTDSP1-212ENST00000494067 H3BNH8 94 aa12.04□□□□□ -0.48
CTDSP1-212ENST00000494067 EIF1AYO14602 144 aaKnown RBP12.04□□□□□ -0.48
CTDSP1-212ENST00000494067 SIAH2O43255 324 aa12.04□□□□□ -0.48
CTDSP1-212ENST00000494067 ITM2AO43736 263 aa12.04□□□□□ -0.48
CTDSP1-212ENST00000494067 DIAPH2O60879 1101 aa12.04□□□□□ -0.48
CTDSP1-212ENST00000494067 PEX11AO75192 247 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms