RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 GORASP2Q9H8Y8 452 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.42□□□□□ -0.58
SNX17-208ENST00000493711 SACM1LQ9NTJ5 587 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 ADPRHL2Q9NX46 363 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 ACTR3BQ9P1U1 418 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 LRFN1Q9P244 771 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 MKLN1Q9UL63 735 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 DTNAQ9Y4J8 743 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 PCDHGB6Q9Y5F9 930 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 PRAMEF27A3QJZ7 478 aa11.41□□□□□ -0.58
SNX17-208ENST00000493711 CFAP73A6NFT4 308 aa11.41□□□□□ -0.58
SNX17-208ENST00000493711 EIF4E1BA6NMX2 242 aaKnown RBP11.41□□□□□ -0.58
SNX17-208ENST00000493711 ALG1L2C9J202 215 aa11.41□□□□□ -0.58
SNX17-208ENST00000493711 NPIPB9F8W1W9 429 aa11.41□□□□□ -0.58
SNX17-208ENST00000493711 FADS1O60427 444 aa11.41□□□□□ -0.58
SNX17-208ENST00000493711 MAN1A2O60476 641 aa11.41□□□□□ -0.58
SNX17-208ENST00000493711 DPM1O60762 260 aa11.41□□□□□ -0.58
SNX17-208ENST00000493711 UGT2B11O75310 529 aa11.41□□□□□ -0.58
SNX17-208ENST00000493711 SNX4O95219 450 aa11.41□□□□□ -0.58
SNX17-208ENST00000493711 P04436 131 aa11.41□□□□□ -0.58
SNX17-208ENST00000493711 IL7RP16871 459 aa11.41□□□□□ -0.58
SNX17-208ENST00000493711 TCN1P20061 433 aaPredicted RBP11.41□□□□□ -0.58
SNX17-208ENST00000493711 ADH7P40394 386 aa11.41□□□□□ -0.58
SNX17-208ENST00000493711 POLE2P56282 527 aa11.41□□□□□ -0.58
SNX17-208ENST00000493711 FBXW4P57775 412 aa11.41□□□□□ -0.58
SNX17-208ENST00000493711 RAPSNQ13702 412 aa11.41□□□□□ -0.58
SNX17-208ENST00000493711 OR1C1Q15619 314 aa11.41□□□□□ -0.58
SNX17-208ENST00000493711 GPR68Q15743 365 aa11.41□□□□□ -0.58
SNX17-208ENST00000493711 COL28A1Q2UY09 1125 aa11.41□□□□□ -0.58
SNX17-208ENST00000493711 KLHL26Q53HC5 615 aa11.41□□□□□ -0.58
SNX17-208ENST00000493711 EIPR1Q53HC9 387 aa11.41□□□□□ -0.58
SNX17-208ENST00000493711 GLYATQ6IB77 296 aa11.41□□□□□ -0.58
SNX17-208ENST00000493711 EIF3MQ7L2H7 374 aaKnown RBP11.41□□□□□ -0.58
SNX17-208ENST00000493711 DHFR2Q86XF0 187 aa11.41□□□□□ -0.58
SNX17-208ENST00000493711 ARMC8Q8IUR7 673 aa11.41□□□□□ -0.58
SNX17-208ENST00000493711 C10orf67Q8IYJ2 551 aa11.41□□□□□ -0.58
SNX17-208ENST00000493711 RNF138Q8WVD3 245 aa11.41□□□□□ -0.58
SNX17-208ENST00000493711 FIG4Q92562 907 aa11.41□□□□□ -0.58
SNX17-208ENST00000493711 SLC35B4Q969S0 331 aa11.41□□□□□ -0.58
SNX17-208ENST00000493711 FAM162AQ96A26 154 aa11.41□□□□□ -0.58
SNX17-208ENST00000493711 C5orf34Q96MH7 638 aa11.41□□□□□ -0.58
SNX17-208ENST00000493711 METTL7AQ9H8H3 244 aa11.41□□□□□ -0.58
SNX17-208ENST00000493711 KLHL28Q9NXS3 571 aa11.41□□□□□ -0.58
SNX17-208ENST00000493711 SEC14L3Q9UDX4 400 aa11.41□□□□□ -0.58
SNX17-208ENST00000493711 RPS6KA6Q9UK32 745 aa11.41□□□□□ -0.58
SNX17-208ENST00000493711 SLC13A4Q9UKG4 626 aa11.41□□□□□ -0.58
SNX17-208ENST00000493711 BAG5Q9UL15 447 aa11.41□□□□□ -0.58
SNX17-208ENST00000493711 SLC35A3Q9Y2D2 325 aa11.41□□□□□ -0.58
SNX17-208ENST00000493711 KLF13Q9Y2Y9 288 aaPredicted RBP11.41□□□□□ -0.58
SNX17-208ENST00000493711 GPC6Q9Y625 555 aaPredicted RBP11.41□□□□□ -0.58
SNX17-208ENST00000493711 CHCHD2Q9Y6H1 151 aaPredicted RBP11.41□□□□□ -0.58
SNX17-208ENST00000493711 TRAV17A0A0B4J275 112 aa11.4□□□□□ -0.58
SNX17-208ENST00000493711 PRAMEF25A6NGN4 478 aa11.4□□□□□ -0.58
SNX17-208ENST00000493711 M0QX08 132 aa11.4□□□□□ -0.58
SNX17-208ENST00000493711 ZNF354AO60765 605 aaPredicted RBP11.4□□□□□ -0.58
SNX17-208ENST00000493711 ICOSLGO75144 302 aa11.4□□□□□ -0.58
SNX17-208ENST00000493711 SLC25A12O75746 678 aa11.4□□□□□ -0.58
SNX17-208ENST00000493711 UGT2B17O75795 530 aa11.4□□□□□ -0.58
SNX17-208ENST00000493711 PDE5AO76074 875 aa11.4□□□□□ -0.58
SNX17-208ENST00000493711 OXSR1O95747 527 aaPredicted RBP11.4□□□□□ -0.58
SNX17-208ENST00000493711 C8BP07358 591 aa11.4□□□□□ -0.58
SNX17-208ENST00000493711 PABPC4LP0CB38 370 aaKnown RBP11.4□□□□□ -0.58
SNX17-208ENST00000493711 NID1P14543 1247 aa11.4□□□□□ -0.58
SNX17-208ENST00000493711 RPS4Y1P22090 263 aaKnown RBP11.4□□□□□ -0.58
SNX17-208ENST00000493711 PRKAR1BP31321 381 aa11.4□□□□□ -0.58
SNX17-208ENST00000493711 EVI2BP34910 448 aa11.4□□□□□ -0.58
SNX17-208ENST00000493711 KCNAB2Q13303 367 aa11.4□□□□□ -0.58
SNX17-208ENST00000493711 GRAMD1BQ3KR37 738 aa11.4□□□□□ -0.58
SNX17-208ENST00000493711 ZNF311Q5JNZ3 666 aa11.4□□□□□ -0.58
SNX17-208ENST00000493711 RNF220Q5VTB9 566 aa11.4□□□□□ -0.58
SNX17-208ENST00000493711 DHRS4L2Q6PKH6 230 aa11.4□□□□□ -0.58
SNX17-208ENST00000493711 ZNF440Q8IYI8 595 aa11.4□□□□□ -0.58
SNX17-208ENST00000493711 AMER2Q8N7J2 671 aa11.4□□□□□ -0.58
SNX17-208ENST00000493711 TMEM178AQ8NBL3 297 aa11.4□□□□□ -0.58
SNX17-208ENST00000493711 PSD4Q8NDX1 1056 aa11.4□□□□□ -0.58
SNX17-208ENST00000493711 OR10G3Q8NGC4 313 aa11.4□□□□□ -0.58
SNX17-208ENST00000493711 OR4C3Q8NH37 302 aa11.4□□□□□ -0.58
SNX17-208ENST00000493711 OR52P1PQ8NH57 321 aa11.4□□□□□ -0.58
SNX17-208ENST00000493711 WDR60Q8WVS4 1066 aa11.4□□□□□ -0.58
SNX17-208ENST00000493711 EXTL1Q92935 676 aa11.4□□□□□ -0.58
SNX17-208ENST00000493711 LRGUKQ96M69 825 aa11.4□□□□□ -0.58
SNX17-208ENST00000493711 NSMCE2Q96MF7 247 aa11.4□□□□□ -0.58
SNX17-208ENST00000493711 BBC3Q96PG8 261 aaPredicted RBP11.4□□□□□ -0.58
SNX17-208ENST00000493711 ANGPTL4Q9BY76 406 aa11.4□□□□□ -0.58
SNX17-208ENST00000493711 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.4□□□□□ -0.58
SNX17-208ENST00000493711 RUBCNLQ9H714 662 aa11.4□□□□□ -0.58
SNX17-208ENST00000493711 SH2D2AQ9NP31 389 aa11.4□□□□□ -0.58
SNX17-208ENST00000493711 FBXO34Q9NWN3 711 aa11.4□□□□□ -0.58
SNX17-208ENST00000493711 KLRF1Q9NZS2 232 aa11.4□□□□□ -0.58
SNX17-208ENST00000493711 SAMD4AQ9UPU9 718 aaKnown RBP11.4□□□□□ -0.58
SNX17-208ENST00000493711 MAST4O15021 2626 aa11.39□□□□□ -0.59
SNX17-208ENST00000493711 SERINC4A6NH21 518 aa11.39□□□□□ -0.59
SNX17-208ENST00000493711 GTPBP1O00178 669 aaKnown RBP11.39□□□□□ -0.59
SNX17-208ENST00000493711 SYT5O00445 386 aa11.39□□□□□ -0.59
SNX17-208ENST00000493711 ARPC2O15144 300 aa11.39□□□□□ -0.59
SNX17-208ENST00000493711 NDUFB5O43674 189 aa11.39□□□□□ -0.59
SNX17-208ENST00000493711 EIF4E2O60573 245 aaKnown RBP11.39□□□□□ -0.59
SNX17-208ENST00000493711 SP1P08047 785 aa11.39□□□□□ -0.59
SNX17-208ENST00000493711 CNR1P21554 472 aa11.39□□□□□ -0.59
SNX17-208ENST00000493711 MSX1P28360 303 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms